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KJC3_010852-T1, KJC3_010852-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010852-T1
Unique NameKJC3_010852-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4523294..4524629-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010852-T1 ID=KJC3_010852-T1|Name=KJC3_010852-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1336bp|location=Sequence derived from alignment at ch7:4523294..4524629- (Aspergillus niger KJC3)
CATACTTTGTGTCTTTGCTCGTAAATCCAAGATGAATACCCCCACCATCG
GAGTCTTCCCAGCTGCAGGAGGTATTGGCGGGAGCACCGTCAAGCATCTC
TTGCCACGTCTTCCATCTGAGAAGCTTGTGTTTATCGCTCGGAGTCCTGA
AAAGCTCAGGAGCTTGCCCGTGGACCAAGCTGTTCTCCGGCAGGCTGACT
ACGACGACGACGAGAGCTTGAAGGTTGCATTCGAGGGGCTGAACATACTC
TTCCTAATCTCCTACGCGTCTGTGGAGCATGAATATCGAACTGAGGTAAG
ACTTAACCCCCCCTTATGTGGAAGCATCCAGTCCGAAACACATGCTGACC
GCGATATGCTTGGGGGATAGCGACACCGCACTGCCATCGACCATGCGATT
CGCATGGGTGTGACACATATCTTCTACGGGTCGCTAGGCTACGGCGGGAA
CCCCGAAGGTGATAAGTCGGTGGCACACGTCATGCAGGCGCACTTGGACA
CCGAAAGATACCTGGAGGAATGCACGCGGCAGCATGTGGGTTTCTCCTAC
ACGGTCATCCGCGAAGGTCTCTACTCCGAGTCGTACCCGCTCTATACCGC
TTTCTTTGATCCGAAGCAGCCCGTCGACGAGATCAAGATCCCCCACGATG
GTGCAGGCCCCGGGATCGCGTGGGTGAAGCGTGAGGAGCTTGGGGAAGGG
TCCGCAGAGCTCATCAAGAGATTCGTGCAGGACCCGAACGGATTTCCCTA
TCGCAATCGCAAAGTGCTCTTGTCCGGCCCGCGAACCCTGACCCTCCGGG
AAACGGTTGCCATTCTGGCCAAGCTCGCCAATCATACGGTGCGCATTCGC
CAGGTCTCCGTGGATGAATTCGCCAGACAACCTCAGGTTTCTTCCAACTT
CACTTACCATGGCGTGGATCATTCGAAGTTGTGGACCTCCACCTTTGAGG
CCTTTCGCCGAGGAGAAGGCGCTTTCTTGTCCCCTTTGCTAGGCGAGCTC
CTGGGACGCGAGCCGGAGGACTTTGAGACTACCGTGTCCCGGTCTTGACT
GTACCATTGAGGAAATGGCTTGTGGGAAATGGGAAGACTTGGATCCTCTC
GTTCGTCTGTATTGCTTTTTCGTATGTGGGAACATGATATTTGTATAGGA
TTCGCATAGATTTGGATGGATTTTTGCAACCGTAACATGATTATTACCTT
ATGTTAGAACAGATCTCTGCTAAGTAGACCGAAACGATATATAGATGGCT
AGAAGCAGCAGGGGTGACTCAGATGTCTCAATACCTTACCTAGTATTGTT
CCCCCAGGCCAATCAGAAGAAGAAGCAGAAGATAGA
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Coding sequence (CDS) from alignment at ch7:4523294..4524629-

>KJC3_010852-T1 ID=KJC3_010852-T1|Name=KJC3_010852-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch7:4523294..4524629- (Aspergillus niger KJC3)
CGACACCGCACTGCCATCGACCATGCGATTCGCATGGGTGTGACACATAT
CTTCTACGGGTCGCTAGGCTACGGCGGGAACCCCGAAGGTGATAAGTCGG
TGGCACACGTCATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAA
TGCACGCGGCAGCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCT
CTACTCCGAGTCGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGC
CCGTCGACGAGATCAAGATCCCCCACGATGGTGCAGGCCCCGGGATCGCG
TGGGTGAAGCGTGAGGAGCTTGGGGAAGGGTCCGCAGAGCTCATCAAGAG
ATTCGTGCAGGACCCGAACGGATTTCCCTATCGCAATCGCAAAGTGCTCT
TGTCCGGCCCGCGAACCCTGACCCTCCGGGAAACGGTTGCCATTCTGGCC
AAGCTCGCCAATCATACGGTGCGCATTCGCCAGGTCTCCGTGGATGAATT
CGCCAGACAACCTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATC
ATTCGAAGTTGTGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGC
GCTTTCTTGTCCCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGA
CTTTGAGACTACCGTGTCCCGGTCTTGAATGAATACCCCCACCATCGGAG
TCTTCCCAGCTGCAGGAGGTATTGGCGGGAGCACCGTCAAGCATCTCTTG
CCACGTCTTCCATCTGAGAAGCTTGTGTTTATCGCTCGGAGTCCTGAAAA
GCTCAGGAGCTTGCCCGTGGACCAAGCTGTTCTCCGGCAGGCTGACTACG
ACGACGACGAGAGCTTGAAGGTTGCATTCGAGGGGCTGAACATACTCTTC
CTAATCTCCTACGCGTCTGTGGAGCATGAATATCGAACTGAGCGACACCG
CACTGCCATCGACCATGCGATTCGCATGGGTGTGACACATATCTTCTACG
GGTCGCTAGGCTACGGCGGGAACCCCGAAGGTGATAAGTCGGTGGCACAC
GTCATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAATGCACGCG
GCAGCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCTCTACTCCG
AGTCGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGCCCGTCGAC
GAGATCAAGATCCCCCACGATGGTGCAGGCCCCGGGATCGCGTGGGTGAA
GCGTGAGGAGCTTGGGGAAGGGTCCGCAGAGCTCATCAAGAGATTCGTGC
AGGACCCGAACGGATTTCCCTATCGCAATCGCAAAGTGCTCTTGTCCGGC
CCGCGAACCCTGACCCTCCGGGAAACGGTTGCCATTCTGGCCAAGCTCGC
CAATCATACGGTGCGCATTCGCCAGGTCTCCGTGGATGAATTCGCCAGAC
AACCTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATCATTCGAAG
TTGTGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGCGCTTTCTT
GTCCCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGACTTTGAGA
CTACCGTGTCCCGGTCTTGAATGAATACCCCCACCATCGGAGTCTTCCCA
GCTGCAGGAGGTATTGGCGGGAGCACCGTCAAGCATCTCTTGCCACGTCT
TCCATCTGAGAAGCTTGTGTTTATCGCTCGGAGTCCTGAAAAGCTCAGGA
GCTTGCCCGTGGACCAAGCTGTTCTCCGGCAGGCTGACTACGACGACGAC
GAGAGCTTGAAGGTTGCATTCGAGGGGCTGAACATACTCTTCCTAATCTC
CTACGCGTCTGTGGAGCATGAATATCGAACTGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010852KJC3_010852Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010852-T1KJC3_010852-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010852-T1.cdsKJC3_010852-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010852-T1.utr3p1KJC3_010852-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010852-T1.exon2KJC3_010852-T1.exon2Aspergillus niger KJC3exon
KJC3_010852-T1.exon1KJC3_010852-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010852-T1.utr5p1KJC3_010852-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4523294..4524629 -
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