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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4536872..4538311+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010858-T1 ID=KJC3_010858-T1|Name=KJC3_010858-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1440bp|location=Sequence derived from alignment at ch7:4536872..4538311+ (Aspergillus niger KJC3)
CTCGGGTAAGGCTGACACGGGTGTCGTTGCCTAAGGCTGTGAGCGAGGAT
GATGGAGACAATCCCCTCGGAATGACATCACATCTTCGATTCCCGCATTC
ACCACATCATTAACATTGCATATTCATTCTAGACGTTCTAGAATGGTTTA
CCCCTGGAACACCTGCTTTTGAAAATTGAGGCACAATTTCTGGTAGTGTG
GATGAGCTCCAGGCCGAGATTTAGGATTGTCATTCTGGCGTCATGGGCGT
CGCAGCAACCAGCGCCGTGAGGATTGCTGGCTACCATCATATTCACGTCA
TGGACTCAGACCACCATCATATCAGGTCCACAAGATGCAAATATCCTTGC
ATCGTCAAATCCCCAGTTAAATATGTCCATTCCACCACGATCAACCAGTT
TCCTGGTGTATATAGCTCCCTCCCGGCTTCTCTCACGACAGATCCCATAT
CAAACCCTCCAACTCCACCGCAAGAATTTCTCCAGCCTCAATCCCACCGC
TAATATGAAGATCGCTATTACCGGAGCCCGCGGCACCGTAGGACGCGCCG
TTGTCAGAGAGGCCTCTCAGGCCGGCCACTCCACAGTCCAGGTTGATCGG
ACCGATACTGAGTACGATGGGACGCCCAATTCCGAGATGAAGACCGCAGA
CACGGCCAATAACTACGAAGCCACGCTTGAAGCCTTCAAAGGTTGTGATG
CCGTTATTCATCTTGCTGCCATACCAGACCCCATAGGGAAGGATGACCAA
GTGGTACACAACAACAATGTTACATCGGCATTCAACGGCTTCTATGCTGC
TGCACAACTGGGGATCAAACGCTTCTGCTATGCGTCGTCAGTAAACGCGA
TCGGTCTCGAATATGCCACGCGACCGCTTCAATTCGAATACTTCCCCGTT
GACGAAGAAGCACCGCCCAACCCGACAGATTCTTACGCACTGGCTAAGCA
AGAAGCTGAGACCCAAGCAAGAACATTCGCTCGATGGTTTCCCGGAATGA
ACATCGCGTGTATGCGTATCCATGCTGTGGCGTCCCGTGAGGAGGCACAG
AAAGGACACAATGAGAATTGGGAGGACTCAGCCGTTAAGAGCTTGTGGGG
ATGGGTGAGCCCGGATGCGACGGCAAGAGCCTGCTTGTTGTCTGTGGAGA
AGGCTGAGAAACTCAATGGATGTGAGATATTTAATGTTGTTGCTCCAACC
ACGACGCAGGACACGCCATCGATTGAGCTTGCGAAGAAGTATTATCCCGA
TACCGAGGTTCGGCACGAACTCAAAGGAAACCAGTCTTTCTTTACAGCTG
AAAAGGCGAATAGGATCCTCGGATGGGTACATGAGGAGTGACTGGCCGGT
AAGACATGTCGCCTATAGAAGCGTTTTCTTCCGATATCGAAGTGAATGAA
CCAGATCAGTCTGTAATGCCCAGCAAATAGCAATGCCGAC back to topCoding sequence (CDS) from alignment at ch7:4536872..4538311+ >KJC3_010858-T1 ID=KJC3_010858-T1|Name=KJC3_010858-T1|organism=Aspergillus niger KJC3|type=CDS|length=969bp|location=Sequence derived from alignment at ch7:4536872..4538311+ (Aspergillus niger KJC3)
ATGTCCATTCCACCACGATCAACCAGTTTCCTGGTGTATATAGCTCCCTC
CCGGCTTCTCTCACGACAGATCCCATATCAAACCCTCCAACTCCACCGCA
AGAATTTCTCCAGCCTCAATCCCACCGCTAATATGAAGATCGCTATTACC
GGAGCCCGCGGCACCGTAGGACGCGCCGTTGTCAGAGAGGCCTCTCAGGC
CGGCCACTCCACAGTCCAGGTTGATCGGACCGATACTGAGTACGATGGGA
CGCCCAATTCCGAGATGAAGACCGCAGACACGGCCAATAACTACGAAGCC
ACGCTTGAAGCCTTCAAAGGTTGTGATGCCGTTATTCATCTTGCTGCCAT
ACCAGACCCCATAGGGAAGGATGACCAAGTGGTACACAACAACAATGTTA
CATCGGCATTCAACGGCTTCTATGCTGCTGCACAACTGGGGATCAAACGC
TTCTGCTATGCGTCGTCAGTAAACGCGATCGGTCTCGAATATGCCACGCG
ACCGCTTCAATTCGAATACTTCCCCGTTGACGAAGAAGCACCGCCCAACC
CGACAGATTCTTACGCACTGGCTAAGCAAGAAGCTGAGACCCAAGCAAGA
ACATTCGCTCGATGGTTTCCCGGAATGAACATCGCGTGTATGCGTATCCA
TGCTGTGGCGTCCCGTGAGGAGGCACAGAAAGGACACAATGAGAATTGGG
AGGACTCAGCCGTTAAGAGCTTGTGGGGATGGGTGAGCCCGGATGCGACG
GCAAGAGCCTGCTTGTTGTCTGTGGAGAAGGCTGAGAAACTCAATGGATG
TGAGATATTTAATGTTGTTGCTCCAACCACGACGCAGGACACGCCATCGA
TTGAGCTTGCGAAGAAGTATTATCCCGATACCGAGGTTCGGCACGAACTC
AAAGGAAACCAGTCTTTCTTTACAGCTGAAAAGGCGAATAGGATCCTCGG
ATGGGTACATGAGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010858-T1.utr5p1 | KJC3_010858-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010858-T1.utr3p1 | KJC3_010858-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF04321 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF01073 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4536872..4538311 + |
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