You are here

Home

KJC3_010884-T1, KJC3_010884-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010884-T1
Unique NameKJC3_010884-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4603661..4604146+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010884-T1 ID=KJC3_010884-T1|Name=KJC3_010884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=486bp|location=Sequence derived from alignment at ch7:4603661..4604146+ (Aspergillus niger KJC3)
ATGGCACCAGGAGCGGAATCGTAAGTGAACAATCACTTATTTCCTACTGA
ATCTACAGAGTTGTTTAACTATCCGAAACTAACATAAGACCCAGCTCCAA
ATCACAAAAGGGCAACCCTAGTATCGAAGACAACAGTCGAACGACGAACA
AAGAGAAATCAGTGCATAATGTTTACAAGGAAGAGCCTGTACGTAAGAGC
CATGATTGAGTGACAGAGCTGTAACCGCTAACTAGTTAACCTTAACGCCG
ATCTAGCAGTCTTCCTCTACACCTGGCTCGGGTTCAGGCTCCCGCCAACA
AACTCCTAATTCCCCTGTGGCTTCCACATCAAAGAACTTCGATTACTTGC
AGGGTAGGCCCTCTCTATTGGAGAGGTCATAGTACATACTGAATACTGAT
ATAGCCGATCCTGGAGCTTTTAAGTGCGCCTTGTGTCGACAGTGGCATAC
AAGGAGATGCCCGTGGTTGAGAAATTATTAGAGTAG
back to top

Coding sequence (CDS) from alignment at ch7:4603661..4604146+

>KJC3_010884-T1 ID=KJC3_010884-T1|Name=KJC3_010884-T1|organism=Aspergillus niger KJC3|type=CDS|length=1080bp|location=Sequence derived from alignment at ch7:4603661..4604146+ (Aspergillus niger KJC3)
ATGGCACCAGGAGCGGAATCCTCCAAATCACAAAAGGGCAACCCTAGTAT
CGAAGACAACAGTCGAACGACGAACAAAGAGAAATCAGTGCATAATGTTT
ACAAGGAAGAGCCTTCTTCCTCTACACCTGGCTCGGGTTCAGGCTCCCGC
CAACAAACTCCTAATTCCCCTGTGGCTTCCACATCAAAGAACTTCGATTA
CTTGCAGGTGCGCCTTGTGTCGACAGTGGCATACAAGGAGATGCCCGTGG
TTGAGAAATTATTAGAGTAGATGGCACCAGGAGCGGAATCCTCCAAATCA
CAAAAGGGCAACCCTAGTATCGAAGACAACAGTCGAACGACGAACAAAGA
GAAATCAGTGCATAATGTTTACAAGGAAGAGCCTTCTTCCTCTACACCTG
GCTCGGGTTCAGGCTCCCGCCAACAAACTCCTAATTCCCCTGTGGCTTCC
ACATCAAAGAACTTCGATTACTTGCAGGTGCGCCTTGTGTCGACAGTGGC
ATACAAGGAGATGCCCGTGGTTGAGAAATTATTAGAGTAGATGGCACCAG
GAGCGGAATCCTCCAAATCACAAAAGGGCAACCCTAGTATCGAAGACAAC
AGTCGAACGACGAACAAAGAGAAATCAGTGCATAATGTTTACAAGGAAGA
GCCTTCTTCCTCTACACCTGGCTCGGGTTCAGGCTCCCGCCAACAAACTC
CTAATTCCCCTGTGGCTTCCACATCAAAGAACTTCGATTACTTGCAGGTG
CGCCTTGTGTCGACAGTGGCATACAAGGAGATGCCCGTGGTTGAGAAATT
ATTAGAGTAGATGGCACCAGGAGCGGAATCCTCCAAATCACAAAAGGGCA
ACCCTAGTATCGAAGACAACAGTCGAACGACGAACAAAGAGAAATCAGTG
CATAATGTTTACAAGGAAGAGCCTTCTTCCTCTACACCTGGCTCGGGTTC
AGGCTCCCGCCAACAAACTCCTAATTCCCCTGTGGCTTCCACATCAAAGA
ACTTCGATTACTTGCAGGTGCGCCTTGTGTCGACAGTGGCATACAAGGAG
ATGCCCGTGGTTGAGAAATTATTAGAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010884KJC3_010884Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010884-T1.exon1KJC3_010884-T1.exon1Aspergillus niger KJC3exon
KJC3_010884-T1.exon2KJC3_010884-T1.exon2Aspergillus niger KJC3exon
KJC3_010884-T1.exon3KJC3_010884-T1.exon3Aspergillus niger KJC3exon
KJC3_010884-T1.exon4KJC3_010884-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010884-T1.cdsKJC3_010884-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010884-T1KJC3_010884-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_7.11
NoteantiSMASH:Cluster_7.10
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4603661..4604146 +
Powered by Drupal