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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4632221..4634782- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010895-T1 ID=KJC3_010895-T1|Name=KJC3_010895-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2562bp|location=Sequence derived from alignment at ch7:4632221..4634782- (Aspergillus niger KJC3)
CGTTAGTCTCCCCTCCCCCCCACATTTGGGAAGAGCCTTTCAGCCTTCCC
AAATGATGCACTTTGGAGAATCATCAGCTAACCACTTTCTGCCTACAGTT
CAAAGAATCACTTTAGAGTAGACGTCCCACCTCTGAGCTCTTCTAAAGAG
CCACAGAATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAA
AGTGAAGCCGTTTTACTTCCGACTCGACCTTGCATTTGCACGCTCTGTTA
CAATCTGTCTTCGGATGGACTTGTTTCGGGTGTCGGTGCGATGGTCCAGG
GAGTGGTGATGATCTTTACCTTGTCATGATGTCTTGACTTCGGTCGGTCG
GACTTGGTGGGTGTCGAGGAGGTCTGAAAGGTGTCTCCTCTTTTACACTT
TAATGTTGGTGTGCTAGAGTATTTGGAGTTGCTCAATCTTGTTTCTCTTT
TCATTTATTCAGATATCAAATGATACCCAATTTTTCTTGAAACTATATAC
ACAATCTCGTCGTAGCCGTAACCGAACTGCAAATCACTAAGCATAGCATG
GGTAAACGCTCTGAAATGCAAAGCCGAAACGGACATAGACGGGTCACCCA
ATTTCCAAACAACATACGACTCGCGTCACATGTGATAGCGACGGTTTATA
TGACGAGTGGTCAATTCCCTCATAACATACATCATGGCTTATCACCGACA
TCAACCATCTTAAGAATCCTTATGGATTCCTCTCCAGCCTTCTCATTGAC
GCCACAGCAAAACCAAAAGGCCCATGCGCTTCTGCATCTCTTTATCCAGG
ATTATGGCCTCGGTCAACGCGTACATAGGGGTTACAGGCCTGCAAAACTA
ATCATGGAGATGTTTGAACGGGTAACGTCGAAAGACAATTTTCTAGAAAT
TTTCTTTTCATATATGTATGAGAGCTACAAAGCTGCTGGAGAGACTGGGG
AAATTAATATAACTGTTGCTCTATCTTACTTTGAGTCCTTCACTGGAGAT
CAAAGTATAGATCCAAGCAAATCGATGTTCATAAAGGGTGCTCTCGAAAG
TTTTGCTGAGAATATTGTTGACAACTTCCTTCTTCCACGTATGAATGTCC
CTTGTCCTTTGAACCTGCTGATCTGCTAATGCGGTCACTTAGTCAGGGCT
TCGTCAAGTAAGACCCCACAAGTAACACCAGCAGCATTGTCCTTGAGTCA
GACACCTACACCATTGGGCACGAGACAGCGTGTATCTGTCTTACGGAAAG
ATTGTCTTGTACGTGATCACCACCGGTGCGTGATATCCCGCAAATTTGAT
ATCGTCGAAGCCAGGAAGCGCAACGCCGAGGATGGTGATAATTGTAAAGA
TGACAATGGAAACCTCTTGAGCAGTAGCTCACGGGGCGAATTCCAGTATC
TGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGA
GAGTCAGAGTTGGTACGTTTATCAATAATCATCTACTGGCTGCATATTAA
CCTTTCCAAGAGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATGT
TTGACCCTGGGCTCAGTCACCGTCTTGATGGCCCGAACATCGATAGACCC
ATCAATGCTCTTACACTGACGCTTGATTATCATCGACTGTTTAGTGGATT
CCAAATTTATTTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGACT
CGCTTGAAGAGAGTACCTTCCTGCGCGACCCGTTCTTCCCCGTCACTCGT
ACTCTGAGCCTTAGTCCTAACCAGTCGATTGATTCACCAGACCCCAGACT
TCTCCGTGTCCACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCCG
GCGACTATATCGAGAAAGTCCTGCGTGACATGCAGGAGGTGGAAGTTAAA
GCTGATGGCTCAACAAATCTAGGTTATATGATGGGTTTGCGACTCAACGG
TTGGTTAAAAACTCTGTCAGACCTGCATGCATAAAAGGCCCTCCAGCACT
CTGTTCTTTCTGGCCAGACACAGACCTTGTGCACACACCCTACAGGAAGA
AGCAAGACTGGAAATTACGACCATCTCGACATGTCTGCTAATGCTGTTGA
ATAAACCTCCCACCTTTGCACGCGCGCCGCCCCCTCGTCTCTTTCTACTT
TTTTTTTTTTTTTTTTTTTTTCCCACCTGGGCAAAGACCTTTCCGAAGGG
GGTTTAAAACCGGGTAATATGGCGGCGGATACTATATCAGCATGGCTGAT
CCTTTCAAGCAAATACCATGGATTCCCCCAAAGCGATGAATAAAGGAACA
AAGATTGACTTGTCAGCTGAGTGGGTATGGTTAGCAGTGCTGGAGAAGTT
CATCAATACAGTCCTAAATTACGAGCCATCAGTTAACGCCTGGAATACAC
GAGGGGGAGAATGCTGTCTTGAGGTACTCCAGGAAGTATGCAGTACCGCT
GATGGCGTTGAGAACTAGGTCCCCGGACTGGGGTTATACTACAGCTATAG
GCTGATACGATCGGAAATTCGAAATATCATGAAAATCATCATTCACTCTT
CTGCTTTTTGTC back to topCoding sequence (CDS) from alignment at ch7:4632221..4634782- >KJC3_010895-T1 ID=KJC3_010895-T1|Name=KJC3_010895-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch7:4632221..4634782- (Aspergillus niger KJC3)
AGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATGTTTGACCCTGG
GCTCAGTCACCGTCTTGATGGCCCGAACATCGATAGACCCATCAATGCTC
TTACACTGACGCTTGATTATCATCGACTGTTTAGTGGATTCCAAATTTAT
TTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGACTCGCTTGAAGA
GAGTACCTTCCTGCGCGACCCGTTCTTCCCCGTCACTCGTACTCTGAGCC
TTAGTCCTAACCAGTCGATTGATTCACCAGACCCCAGACTTCTCCGTGTC
CACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCCGGCGACTATAT
CGAGAAAGTCCTGCGTGACATGCAGGAGGTGGAAGTTAAAGCTGATGGCT
CAACAAATCTAGGTTATATGATGGGTTTGCGACTCAACGGTTGGTTAAAA
ACTCTGTCAGACCTGCATGCATAATAGCTCACGGGGCGAATTCCAGTATC
TGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGA
GAGTCAGAGTTGTCAGGGCTTCGTCAAGTAAGACCCCACAAGTAACACCA
GCAGCATTGTCCTTGAGTCAGACACCTACACCATTGGGCACGAGACAGCG
TGTATCTGTCTTACGGAAAGATTGTCTTGTACGTGATCACCACCGATGGG
TAAACGCTCTGAAATGCAAAGCCGAAACGGACATAGACGGGTCACCCAAT
TTCCAAACAACATACGACTCGCGTCACATGTGATAGCGACGGTTTATATG
ACGAGTGGTCAATTCCCTCATAACATACATCATGGCTTATCACCGACATC
AACCATCTTAAGAATCCTTATGGATTCCTCTCCAGCCTTCTCATTGACGC
CACAGCAAAACCAAAAGGCCCATGCGCTTCTGCATCTCTTTATCCAGGAT
TATGGCCTCGGTCAACGCGTACATAGGGGTTACAGGCCTGCAAAACTAAT
CATGGAGATGTTTGAACGGGTAACGTCGAAAGACAATTTTCTAGAAATTT
TCTTTTCATATATGTATGAGAGCTACAAAGCTGCTGGAGAGACTGGGGAA
ATTAATATAACTGTTGCTCTATCTTACTTTGAGTCCTTCACTGGAGATCA
AAGTATAGATCCAAGCAAATCGATGTTCATAAAGGGTGCTCTCGAAAGTT
TTGCTGAGAATATTGTTGACAACTTCCTTCTTCCACAGCGAGGCAAAAAG
GAAGGTGTTTCGAATACTGGATATGTTTGACCCTGGGCTCAGTCACCGTC
TTGATGGCCCGAACATCGATAGACCCATCAATGCTCTTACACTGACGCTT
GATTATCATCGACTGTTTAGTGGATTCCAAATTTATTTCGAGCCCACAGG
AAGGCCACATGAATATAAGATCGACTCGCTTGAAGAGAGTACCTTCCTGC
GCGACCCGTTCTTCCCCGTCACTCGTACTCTGAGCCTTAGTCCTAACCAG
TCGATTGATTCACCAGACCCCAGACTTCTCCGTGTCCACTGCGCCATTGC
ACATATTATGAAACTCAGCGGGGCCGGCGACTATATCGAGAAAGTCCTGC
GTGACATGCAGGAGGTGGAAGTTAAAGCTGATGGCTCAACAAATCTAGGT
TATATGATGGGTTTGCGACTCAACGGTTGGTTAAAAACTCTGTCAGACCT
GCATGCATAATAGCTCACGGGGCGAATTCCAGTATCTGGAAGTTGCGCAC
ATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGAGAGTCAGAGTTGTC
AGGGCTTCGTCAAGTAAGACCCCACAAGTAACACCAGCAGCATTGTCCTT
GAGTCAGACACCTACACCATTGGGCACGAGACAGCGTGTATCTGTCTTAC
GGAAAGATTGTCTTGTACGTGATCACCACCGATGGGTAAACGCTCTGAAA
TGCAAAGCCGAAACGGACATAGACGGGTCACCCAATTTCCAAACAACATA
CGACTCGCGTCACATGTGATAGCGACGGTTTATATGACGAGTGGTCAATT
CCCTCATAACATACATCATGGCTTATCACCGACATCAACCATCTTAAGAA
TCCTTATGGATTCCTCTCCAGCCTTCTCATTGACGCCACAGCAAAACCAA
AAGGCCCATGCGCTTCTGCATCTCTTTATCCAGGATTATGGCCTCGGTCA
ACGCGTACATAGGGGTTACAGGCCTGCAAAACTAATCATGGAGATGTTTG
AACGGGTAACGTCGAAAGACAATTTTCTAGAAATTTTCTTTTCATATATG
TATGAGAGCTACAAAGCTGCTGGAGAGACTGGGGAAATTAATATAACTGT
TGCTCTATCTTACTTTGAGTCCTTCACTGGAGATCAAAGTATAGATCCAA
GCAAATCGATGTTCATAAAGGGTGCTCTCGAAAGTTTTGCTGAGAATATT
GTTGACAACTTCCTTCTTCCACAGCGAGGCAAAAAGGAAGGTGTTTCGAA
TACTGGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGCCCGAAC
ATCGATAGACCCATCAATGCTCTTACACTGACGCTTGATTATCATCGACT
GTTTAGTGGATTCCAAATTTATTTCGAGCCCACAGGAAGGCCACATGAAT
ATAAGATCGACTCGCTTGAAGAGAGTACCTTCCTGCGCGACCCGTTCTTC
CCCGTCACTCGTACTCTGAGCCTTAGTCCTAACCAGTCGATTGATTCACC
AGACCCCAGACTTCTCCGTGTCCACTGCGCCATTGCACATATTATGAAAC
TCAGCGGGGCCGGCGACTATATCGAGAAAGTCCTGCGTGACATGCAGGAG
GTGGAAGTTAAAGCTGATGGCTCAACAAATCTAGGTTATATGATGGGTTT
GCGACTCAACGGTTGGTTAAAAACTCTGTCAGACCTGCATGCATAATAGC
TCACGGGGCGAATTCCAGTATCTGGAAGTTGCGCACATCCTTCCTTACAG
TTTGACAACATTGGCGCAGGGAGAGTCAGAGTTGTCAGGGCTTCGTCAAG
TAAGACCCCACAAGTAACACCAGCAGCATTGTCCTTGAGTCAGACACCTA
CACCATTGGGCACGAGACAGCGTGTATCTGTCTTACGGAAAGATTGTCTT
GTACGTGATCACCACCGATGGGTAAACGCTCTGAAATGCAAAGCCGAAAC
GGACATAGACGGGTCACCCAATTTCCAAACAACATACGACTCGCGTCACA
TGTGATAGCGACGGTTTATATGACGAGTGGTCAATTCCCTCATAACATAC
ATCATGGCTTATCACCGACATCAACCATCTTAAGAATCCTTATGGATTCC
TCTCCAGCCTTCTCATTGACGCCACAGCAAAACCAAAAGGCCCATGCGCT
TCTGCATCTCTTTATCCAGGATTATGGCCTCGGTCAACGCGTACATAGGG
GTTACAGGCCTGCAAAACTAATCATGGAGATGTTTGAACGGGTAACGTCG
AAAGACAATTTTCTAGAAATTTTCTTTTCATATATGTATGAGAGCTACAA
AGCTGCTGGAGAGACTGGGGAAATTAATATAACTGTTGCTCTATCTTACT
TTGAGTCCTTCACTGGAGATCAAAGTATAGATCCAAGCAAATCGATGTTC
ATAAAGGGTGCTCTCGAAAGTTTTGCTGAGAATATTGTTGACAACTTCCT
TCTTCCACAGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATGTTT
GACCCTGGGCTCAGTCACCGTCTTGATGGCCCGAACATCGATAGACCCAT
CAATGCTCTTACACTGACGCTTGATTATCATCGACTGTTTAGTGGATTCC
AAATTTATTTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGACTCG
CTTGAAGAGAGTACCTTCCTGCGCGACCCGTTCTTCCCCGTCACTCGTAC
TCTGAGCCTTAGTCCTAACCAGTCGATTGATTCACCAGACCCCAGACTTC
TCCGTGTCCACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCCGGC
GACTATATCGAGAAAGTCCTGCGTGACATGCAGGAGGTGGAAGTTAAAGC
TGATGGCTCAACAAATCTAGGTTATATGATGGGTTTGCGACTCAACGGTT
GGTTAAAAACTCTGTCAGACCTGCATGCATAATAGCTCACGGGGCGAATT
CCAGTATCTGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGG
CGCAGGGAGAGTCAGAGTTGTCAGGGCTTCGTCAAGTAAGACCCCACAAG
TAACACCAGCAGCATTGTCCTTGAGTCAGACACCTACACCATTGGGCACG
AGACAGCGTGTATCTGTCTTACGGAAAGATTGTCTTGTACGTGATCACCA
CCGATGGGTAAACGCTCTGAAATGCAAAGCCGAAACGGACATAGACGGGT
CACCCAATTTCCAAACAACATACGACTCGCGTCACATGTGATAGCGACGG
TTTATATGACGAGTGGTCAATTCCCTCATAACATACATCATGGCTTATCA
CCGACATCAACCATCTTAAGAATCCTTATGGATTCCTCTCCAGCCTTCTC
ATTGACGCCACAGCAAAACCAAAAGGCCCATGCGCTTCTGCATCTCTTTA
TCCAGGATTATGGCCTCGGTCAACGCGTACATAGGGGTTACAGGCCTGCA
AAACTAATCATGGAGATGTTTGAACGGGTAACGTCGAAAGACAATTTTCT
AGAAATTTTCTTTTCATATATGTATGAGAGCTACAAAGCTGCTGGAGAGA
CTGGGGAAATTAATATAACTGTTGCTCTATCTTACTTTGAGTCCTTCACT
GGAGATCAAAGTATAGATCCAAGCAAATCGATGTTCATAAAGGGTGCTCT
CGAAAGTTTTGCTGAGAATATTGTTGACAACTTCCTTCTTCCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010895-T1.utr3p1 | KJC3_010895-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010895-T1.utr5p1 | KJC3_010895-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.11 |
| Note | antiSMASH:Cluster_7.10 |
| DBxref | InterPro:IPR003615 |
| DBxref | PFAM:PF13391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4632221..4634782 - |
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