|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4636427..4637501+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010896-T1 ID=KJC3_010896-T1|Name=KJC3_010896-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1075bp|location=Sequence derived from alignment at ch7:4636427..4637501+ (Aspergillus niger KJC3)
GGTGCATTATCGATAGGCTATCAATGTCTTCCATACTCATGCCAGCCTTG
ACGGCCCGAGGAGCCAAAGGTATATAAACCTCTTCCTTGCCCGCTGAACA
GTTTCTATCATCATCAGCATCGCATCCCATCGCATCTCACTCTCATACTC
TCAAATTTTCAATACCTAAAAGCAATATCAGCTTTCCATTCAGCAAGATG
AAGTTCACTGTCGGTTCTGCTATGGTGGCCACCACCTTCCTCTCCGCTGC
GAACGCCGCCTTCCCCTCCATCCCCAACATCCCCGAGACCTGCTTGGAGA
TCCCCCAGGTCATTGGCAACAAGCCTCTCCAGCTGCTCTCCTACTTCCAC
AAGGAGGTCTGCGAGAAGAACTGCACTGCCACCATCAACCAGCACAATCA
GTACCTTCAGGAGTCGGTCTTCCCCCAGATCATGAAGGACCTGGACCAGA
AGCTGGACATACCCGCCTCCGAGCAGGCCTCTTTCCAGAAAATCCAGACT
CAGATCACTTCCGCCATCGAGAAGGACTGCAAGTCTGAAGGCGACAAGCC
TCTGTGCAATGACCTCGAGGGTCTGGCCAACTACGGCATTTGTGCGCTCA
AGGCTAGCCAGCCCATCATCATGAACAACATTGGCCAGCTCCAAGGCTCC
GTGAACATCACCGACGCCGACTGCACCAAGATCAAGCAGATCGATTCCGA
CGCGACTGTCTGGCAGAAGACCCTCCCCGGGTACGTTGACAAGTTCGCTC
AGCTGTGTGAGAGCGAGAAGTCGAACTAGAGGTATGACAGCTTTGCCCGA
TAATTGCAAAACATTGCTGACTGTTATGATCAAGGTTCGCGGGACCAACA
ATCCGGTGAAAGAAGCCTGCTATATCGCATGGATGTGTAGTGTTAGGAGA
TCGGGAATCTTTGGCTTTTTGGGTTTAGTCTGACGCTGTAGCAGCATCTG
GGATGCTCGCCGTCGCTCCTTTGGACGCGTCGATTCGCAATGAAGAATGT
TATTGTGAATTCCTGACATTGACAGGTAGTTCATCAGGTACTCTAGTTTA
GAAAGTGAAATGTGACTTTTTGCTT back to topCoding sequence (CDS) from alignment at ch7:4636427..4637501+ >KJC3_010896-T1 ID=KJC3_010896-T1|Name=KJC3_010896-T1|organism=Aspergillus niger KJC3|type=CDS|length=582bp|location=Sequence derived from alignment at ch7:4636427..4637501+ (Aspergillus niger KJC3)
ATGAAGTTCACTGTCGGTTCTGCTATGGTGGCCACCACCTTCCTCTCCGC
TGCGAACGCCGCCTTCCCCTCCATCCCCAACATCCCCGAGACCTGCTTGG
AGATCCCCCAGGTCATTGGCAACAAGCCTCTCCAGCTGCTCTCCTACTTC
CACAAGGAGGTCTGCGAGAAGAACTGCACTGCCACCATCAACCAGCACAA
TCAGTACCTTCAGGAGTCGGTCTTCCCCCAGATCATGAAGGACCTGGACC
AGAAGCTGGACATACCCGCCTCCGAGCAGGCCTCTTTCCAGAAAATCCAG
ACTCAGATCACTTCCGCCATCGAGAAGGACTGCAAGTCTGAAGGCGACAA
GCCTCTGTGCAATGACCTCGAGGGTCTGGCCAACTACGGCATTTGTGCGC
TCAAGGCTAGCCAGCCCATCATCATGAACAACATTGGCCAGCTCCAAGGC
TCCGTGAACATCACCGACGCCGACTGCACCAAGATCAAGCAGATCGATTC
CGACGCGACTGTCTGGCAGAAGACCCTCCCCGGGTACGTTGACAAGTTCG
CTCAGCTGTGTGAGAGCGAGAAGTCGAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010896-T1.utr5p1 | KJC3_010896-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.11 |
| Note | SECRETED:SignalP(1-20) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4636427..4637501 + |
|
