You are here

Home

KJC3_010919-T1, KJC3_010919-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010919-T1
Unique NameKJC3_010919-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4684387..4685497-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010919-T1 ID=KJC3_010919-T1|Name=KJC3_010919-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1111bp|location=Sequence derived from alignment at ch7:4684387..4685497- (Aspergillus niger KJC3)
ATGATATCTTGCGGTGCTCGACGGTTCGTATTTCTCAGTCGATCCGGTAA
TGATAAGCCCCAGGCGAAGAACTTGGTCGAATATCTACAGGCGCAAGTAG
CCTATGTCACAGTGATCCGGGGAGATGTTTGCCGGTACGAGGATGTCGAA
CGGGCTGTGGAAGTGGGGGACTATCCTACTGGTGGCGTAATCCAGACGGC
TATAGCACTCGACGAGACTATATGGAGTGATATGCCGCATAGTGCGTGGC
GAACTACTATGAGCTCCAAGGTGCAGGGGACTTGGAATCTTCACAATGCG
TTGAGGCAGAATGGTCGAGACTCCCAGCTGGACTTCTTCGTCATGACTTC
ATCCATCTCCGGAACCGTGGGCACAGCAACTGAAAGCAATTACTGCGCAG
CCAACTCGTTCCTAGATGCTTTCGCCCGGTATCGAAACCATCTCGGACTA
CCGGCTATCTCTCTCGGCTACGGGATGATTTCAGAAGTATACATGCACGA
GCACCCAGACATCGAAGCGCTTACGGATCGTGGAGGAGTCCATCCCATCA
ACGAAGACGAACTGATCCAGATCATGAACATGGCTCTCGTAAACCAAAGA
CCATGCACATGGGACTCTCGCTACGATCACCCTGGCGGGCAGTCACATTC
TCACCGGTGTGGAGTTTACCGGCCTTCAGGAACAGCGGGAACGAGGATTC
GAGGGCGACAACCATGTCCTTGCTGATCCTCGTGCTGCAATTTTCACTGC
GTCCTTTGCCCGCCGCGCCGCGGGGGAGGGCAAACGCGAAACGCGCAACG
CGACGGCACATCTTCCTAAGAATATTGCGCGAGCGCTGCGCGACAACCAA
GATGTGGAATCGAACCTCGATGCACTTCGTGCTGTTGTATCAAAGAAGAT
CTCCAATCTAATTCTTCTGCCAGAGTCCGACCTGCAAGCGAACCAGCCTC
TGGGTGACTCTGGCTTGGATTCTATGCTGGCTGCTGAGTTTCGGACCTTT
ATCTTCCGCATGTTTGAAGTTGACATTCCTTTTGTGGTACTTCTGAAGAG
GAGCACAATTGTGAATCTTCTGACTGATATGATTGCCCAAGGTCTACAAG
CAGGTACTTGA
back to top

Coding sequence (CDS) from alignment at ch7:4684387..4685497-

>KJC3_010919-T1 ID=KJC3_010919-T1|Name=KJC3_010919-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch7:4684387..4685497- (Aspergillus niger KJC3)
TTTACCGGCCTTCAGGAACAGCGGGAACGAGGATTCGAGGGCGACAACCA
TGTCCTTGCTGATCCTCGTGCTGCAATTTTCACTGCGTCCTTTGCCCGCC
GCGCCGCGGGGGAGGGCAAACGCGAAACGCGCAACGCGACGGCACATCTT
CCTAAGAATATTGCGCGAGCGCTGCGCGACAACCAAGATGTGGAATCGAA
CCTCGATGCACTTCGTGCTGTTGTATCAAAGAAGATCTCCAATCTAATTC
TTCTGCCAGAGTCCGACCTGCAAGCGAACCAGCCTCTGGGTGACTCTGGC
TTGGATTCTATGCTGGCTGCTGAGTTTCGGACCTTTATCTTCCGCATGTT
TGAAGTTGACATTCCTTTTGTGGTACTTCTGAAGAGGAGCACAATTGTGA
ATCTTCTGACTGATATGATTGCCCAAGGTCTACAAGCAGGTACTTGAATG
ATATCTTGCGGTGCTCGACGGTTCGTATTTCTCAGTCGATCCGGTAATGA
TAAGCCCCAGGCGAAGAACTTGGTCGAATATCTACAGGCGCAAGTAGCCT
ATGTCACAGTGATCCGGGGAGATGTTTGCCGGTACGAGGATGTCGAACGG
GCTGTGGAAGTGGGGGACTATCCTACTGGTGGCGTAATCCAGACGGCTAT
AGCACTCGACGAGACTATATGGAGTGATATGCCGCATAGTGCGTGGCGAA
CTACTATGAGCTCCAAGGTGCAGGGGACTTGGAATCTTCACAATGCGTTG
AGGCAGAATGGTCGAGACTCCCAGCTGGACTTCTTCGTCATGACTTCATC
CATCTCCGGAACCGTGGGCACAGCAACTGAAAGCAATTACTGCGCAGCCA
ACTCGTTCCTAGATGCTTTCGCCCGGTATCGAAACCATCTCGGACTACCG
GCTATCTCTCTCGGCTACGGGATGATTTCAGAAGTATACATGCACGAGCA
CCCAGACATCGAAGCGCTTACGGATCGTGGAGGAGTCCATCCCATCAACG
AAGACGAACTGATCCAGATCATGAACATGGCTCTCTTTACCGGCCTTCAG
GAACAGCGGGAACGAGGATTCGAGGGCGACAACCATGTCCTTGCTGATCC
TCGTGCTGCAATTTTCACTGCGTCCTTTGCCCGCCGCGCCGCGGGGGAGG
GCAAACGCGAAACGCGCAACGCGACGGCACATCTTCCTAAGAATATTGCG
CGAGCGCTGCGCGACAACCAAGATGTGGAATCGAACCTCGATGCACTTCG
TGCTGTTGTATCAAAGAAGATCTCCAATCTAATTCTTCTGCCAGAGTCCG
ACCTGCAAGCGAACCAGCCTCTGGGTGACTCTGGCTTGGATTCTATGCTG
GCTGCTGAGTTTCGGACCTTTATCTTCCGCATGTTTGAAGTTGACATTCC
TTTTGTGGTACTTCTGAAGAGGAGCACAATTGTGAATCTTCTGACTGATA
TGATTGCCCAAGGTCTACAAGCAGGTACTTGAATGATATCTTGCGGTGCT
CGACGGTTCGTATTTCTCAGTCGATCCGGTAATGATAAGCCCCAGGCGAA
GAACTTGGTCGAATATCTACAGGCGCAAGTAGCCTATGTCACAGTGATCC
GGGGAGATGTTTGCCGGTACGAGGATGTCGAACGGGCTGTGGAAGTGGGG
GACTATCCTACTGGTGGCGTAATCCAGACGGCTATAGCACTCGACGAGAC
TATATGGAGTGATATGCCGCATAGTGCGTGGCGAACTACTATGAGCTCCA
AGGTGCAGGGGACTTGGAATCTTCACAATGCGTTGAGGCAGAATGGTCGA
GACTCCCAGCTGGACTTCTTCGTCATGACTTCATCCATCTCCGGAACCGT
GGGCACAGCAACTGAAAGCAATTACTGCGCAGCCAACTCGTTCCTAGATG
CTTTCGCCCGGTATCGAAACCATCTCGGACTACCGGCTATCTCTCTCGGC
TACGGGATGATTTCAGAAGTATACATGCACGAGCACCCAGACATCGAAGC
GCTTACGGATCGTGGAGGAGTCCATCCCATCAACGAAGACGAACTGATCC
AGATCATGAACATGGCTCTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010919KJC3_010919Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010919-T1KJC3_010919-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010919-T1.cdsKJC3_010919-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010919-T1.exon2KJC3_010919-T1.exon2Aspergillus niger KJC3exon
KJC3_010919-T1.exon1KJC3_010919-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR009081
DBxrefInterPro:IPR013968
DBxrefInterPro:IPR036736
DBxrefPFAM:PF00550
DBxrefPFAM:PF08659
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4684387..4685497 -
Powered by Drupal