You are here

Home

KJC3_010926-T1, KJC3_010926-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010926-T1
Unique NameKJC3_010926-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4701945..4704276-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010926-T1 ID=KJC3_010926-T1|Name=KJC3_010926-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2332bp|location=Sequence derived from alignment at ch7:4701945..4704276- (Aspergillus niger KJC3)
ATGCATGCATCGATAGTTGAGTCAGTTCATGGTTCGGACGAAAGAGGCTC
GGACGGACTTCCTCGCCACGCTTTCTCCAGCCGCAAATCCGACCGAACTT
TACTCCGACCTCATCTTCGTCCGAACAGAGTGGGTCAGTCCAACCAGCCG
TTGAAGCTCTGCATAGTCAAAGCGCCCCTGATGATTCAGAATCGGCAAAT
GAGAAAAGGGACGCGCAGCTGTACTGCATGTGAGTATTGAATATTTCTCC
GCTTGTCGCTGTGCCTCTGACATTGACCCTGGCGGGCTGCAGGTCGTCGC
CGGAAAGTTCGCTGCATCTTTCCGTCCGAAGAATCTGACGTGTGCTCCAA
TTGTGCCAGGCGAGGGTCTATATGTGTTCCGCAAGGTGTATCACTAGATT
TGGGCCCTGGATTTGATGATAGAGCACGTCTACGTCGCCGAGCCAAGTCG
CGACACCTAAATAACCAGTCCGTGCCGCAAGCCACACCCGACGGGGAGAC
CATCAGTGGCTCGGACCGGTTCAGTGACGTCCTGGGGGCTCTGAAAAATC
TAGAGAAAAAGGTCCATGTATCACTAGGATTGAGTCGTAACCATGCTCCA
GCCCGAGGTGTCGTTGGGACATCACGTGAGGTCGACTCAATACAGAGTGA
TCGTGCCCCGATCATGAAGCTTTTGAACCATGAATTGGTAGGATGAATCA
GCATACTGCGACTGGAATGTTTGCTGAGATAAACAGATCGGTCGAGTTTC
CGAGCCTGAGCAAGAGGCATCTCAACAAGTACCAAGTCAAGAATCTAAGC
GCAACAAAACCCGCCTCTCCAACCTGCCCACTGAACATGCTGAAGCGCTC
AAAGGCCTACTTGAGGCATTACCAACAGAGCCAGAGATGAGCAGAATATT
CCAGACTAAAAGTGACTGGTGGAACTCCTGGCGCGAATCCTTCGGGCTAA
GCTGGGGCGATGAAGACGATTTCAGCCTTGAGGCGTTCGCTATTCGGACT
TTCCAGACCGGTCATCCCGCTCTAGTCGGAAGCCTCCTACTCTGCTTTGC
TCTCAGCACGGGCGATTTTGCAAGATACCTTCCTCCAGTAGAACATTGGA
TCCTGAATAACGATGAAGTTGCTAGCAGTACATATGGCCTGCAGTGCTTG
ATAGGCCTAGGACTCTGCTTCATGAGCTCCTTACAACCTCGTCGTGCCTG
GGCTACATATCGTAAGGCTAATACGCTTTTGCAACTTGCAGGAATCCATC
GGACTCACCGGAAGTCCAAGAGTCTGAATACAATTTTCTGGCAGTTGTTT
TCGGCCGACCGATGGGTTAGTCTGCTGATTGGACTGCCATATTCAGTGCC
CGAAAATCTCTGTGATCTTTATATTCCTCCACCAGATGAGGAGTTGTTCG
TCAACTTTCACTACCGACACCTATCTATTTTGACTGGCCGGGTCATTGAT
TGTCTGCAGTCTGAGAAAAGCCCTACTTTATCCATGGTTACGGGAGTTGA
TGAGCAAATCGACGAAATTACGGCACATTTACCAGTCGGATATCTGGATC
TGGGGCAGATTAGACTATGTCGAGATGCCAAAGAGAGACATACTCGGGCC
TTCCGCCTGGCTCACGTTCACAGCCTGAAGGCACAACTATACATGCCGTT
ATTCTTGCAGGGGTCCCATGACGATAGGCAAGAGTATAGTCGGATGGCTT
GTGTGAGGAGCGCAAGGACTCTTCTAGAAGCGTACCTTCTCCTGCATGAG
AGTGACCCTGCTGCGGCACGCTCAGATAATAGCATCAAACAGTCGGCACC
GAGTGCGCTGACAGCAGCGGTGATTGTCTTCCTGAATATGCTCGGCTATG
GGAGGAATACTGCCGCAGATGCAGTACAAGAGAGAGCTACCAATAAAAAT
CATGATGATGGGTTGATCAAACGGATCCTGATCGCGCTGGACAGCTGGTC
GGAGAATCAACCAGGTTCATTGTCTGGCCAGTGCCATGCTACACTCAAAA
ACCTCGTGGAAAGCAGTCAAGAATTGCACAAAGGAGAGCGTCGCGAGATT
GTCGTGCCGTACTTTGGCAGGGTGACTGTCGACCGCGGAGAGGGCGCTTC
GCAGCCTGCCGATTCTAGGCTAGATACTTCACGTGGAGCAGCCCCTATGT
TGGAATCGAATGTCGATAACGTCGCTACTTGGTCTGCCCTGTCCGATGAT
ATTTTCCTTTCGTATTCCGGTCCATGGACAGCGCAAGACGATTATGCAGG
GGGGCTTTTAGACAATACCGATGCAGCAGCAGCAGCTTTCGATTGGATAA
CTGGGCCTGAGTACGGCTTTAGCCTATGCTAA
back to top

Coding sequence (CDS) from alignment at ch7:4701945..4704276-

>KJC3_010926-T1 ID=KJC3_010926-T1|Name=KJC3_010926-T1|organism=Aspergillus niger KJC3|type=CDS|length=6660bp|location=Sequence derived from alignment at ch7:4701945..4704276- (Aspergillus niger KJC3)
ATCGGTCGAGTTTCCGAGCCTGAGCAAGAGGCATCTCAACAAGTACCAAG
TCAAGAATCTAAGCGCAACAAAACCCGCCTCTCCAACCTGCCCACTGAAC
ATGCTGAAGCGCTCAAAGGCCTACTTGAGGCATTACCAACAGAGCCAGAG
ATGAGCAGAATATTCCAGACTAAAAGTGACTGGTGGAACTCCTGGCGCGA
ATCCTTCGGGCTAAGCTGGGGCGATGAAGACGATTTCAGCCTTGAGGCGT
TCGCTATTCGGACTTTCCAGACCGGTCATCCCGCTCTAGTCGGAAGCCTC
CTACTCTGCTTTGCTCTCAGCACGGGCGATTTTGCAAGATACCTTCCTCC
AGTAGAACATTGGATCCTGAATAACGATGAAGTTGCTAGCAGTACATATG
GCCTGCAGTGCTTGATAGGCCTAGGACTCTGCTTCATGAGCTCCTTACAA
CCTCGTCGTGCCTGGGCTACATATCGTAAGGCTAATACGCTTTTGCAACT
TGCAGGAATCCATCGGACTCACCGGAAGTCCAAGAGTCTGAATACAATTT
TCTGGCAGTTGTTTTCGGCCGACCGATGGGTTAGTCTGCTGATTGGACTG
CCATATTCAGTGCCCGAAAATCTCTGTGATCTTTATATTCCTCCACCAGA
TGAGGAGTTGTTCGTCAACTTTCACTACCGACACCTATCTATTTTGACTG
GCCGGGTCATTGATTGTCTGCAGTCTGAGAAAAGCCCTACTTTATCCATG
GTTACGGGAGTTGATGAGCAAATCGACGAAATTACGGCACATTTACCAGT
CGGATATCTGGATCTGGGGCAGATTAGACTATGTCGAGATGCCAAAGAGA
GACATACTCGGGCCTTCCGCCTGGCTCACGTTCACAGCCTGAAGGCACAA
CTATACATGCCGTTATTCTTGCAGGGGTCCCATGACGATAGGCAAGAGTA
TAGTCGGATGGCTTGTGTGAGGAGCGCAAGGACTCTTCTAGAAGCGTACC
TTCTCCTGCATGAGAGTGACCCTGCTGCGGCACGCTCAGATAATAGCATC
AAACAGTCGGCACCGAGTGCGCTGACAGCAGCGGTGATTGTCTTCCTGAA
TATGCTCGGCTATGGGAGGAATACTGCCGCAGATGCAGTACAAGAGAGAG
CTACCAATAAAAATCATGATGATGGGTTGATCAAACGGATCCTGATCGCG
CTGGACAGCTGGTCGGAGAATCAACCAGGTTCATTGTCTGGCCAGTGCCA
TGCTACACTCAAAAACCTCGTGGAAAGCAGTCAAGAATTGCACAAAGGAG
AGCGTCGCGAGATTGTCGTGCCGTACTTTGGCAGGGTGACTGTCGACCGC
GGAGAGGGCGCTTCGCAGCCTGCCGATTCTAGGCTAGATACTTCACGTGG
AGCAGCCCCTATGTTGGAATCGAATGTCGATAACGTCGCTACTTGGTCTG
CCCTGTCCGATGATATTTTCCTTTCGTATTCCGGTCCATGGACAGCGCAA
GACGATTATGCAGGGGGGCTTTTAGACAATACCGATGCAGCAGCAGCAGC
TTTCGATTGGATAACTGGGCCTGAGTACGGCTTTAGCCTATGCTAAGTCG
TCGCCGGAAAGTTCGCTGCATCTTTCCGTCCGAAGAATCTGACGTGTGCT
CCAATTGTGCCAGGCGAGGGTCTATATGTGTTCCGCAAGGTGTATCACTA
GATTTGGGCCCTGGATTTGATGATAGAGCACGTCTACGTCGCCGAGCCAA
GTCGCGACACCTAAATAACCAGTCCGTGCCGCAAGCCACACCCGACGGGG
AGACCATCAGTGGCTCGGACCGGTTCAGTGACGTCCTGGGGGCTCTGAAA
AATCTAGAGAAAAAGGTCCATGTATCACTAGGATTGAGTCGTAACCATGC
TCCAGCCCGAGGTGTCGTTGGGACATCACGTGAGGTCGACTCAATACAGA
GTGATCGTGCCCCGATCATGAAGCTTTTGAACCATGAATTGATGCATGCA
TCGATAGTTGAGTCAGTTCATGGTTCGGACGAAAGAGGCTCGGACGGACT
TCCTCGCCACGCTTTCTCCAGCCGCAAATCCGACCGAACTTTACTCCGAC
CTCATCTTCGTCCGAACAGAGTGGGTCAGTCCAACCAGCCGTTGAAGCTC
TGCATAGTCAAAGCGCCCCTGATGATTCAGAATCGGCAAATGAGAAAAGG
GACGCGCAGCTGTACTGCATATCGGTCGAGTTTCCGAGCCTGAGCAAGAG
GCATCTCAACAAGTACCAAGTCAAGAATCTAAGCGCAACAAAACCCGCCT
CTCCAACCTGCCCACTGAACATGCTGAAGCGCTCAAAGGCCTACTTGAGG
CATTACCAACAGAGCCAGAGATGAGCAGAATATTCCAGACTAAAAGTGAC
TGGTGGAACTCCTGGCGCGAATCCTTCGGGCTAAGCTGGGGCGATGAAGA
CGATTTCAGCCTTGAGGCGTTCGCTATTCGGACTTTCCAGACCGGTCATC
CCGCTCTAGTCGGAAGCCTCCTACTCTGCTTTGCTCTCAGCACGGGCGAT
TTTGCAAGATACCTTCCTCCAGTAGAACATTGGATCCTGAATAACGATGA
AGTTGCTAGCAGTACATATGGCCTGCAGTGCTTGATAGGCCTAGGACTCT
GCTTCATGAGCTCCTTACAACCTCGTCGTGCCTGGGCTACATATCGTAAG
GCTAATACGCTTTTGCAACTTGCAGGAATCCATCGGACTCACCGGAAGTC
CAAGAGTCTGAATACAATTTTCTGGCAGTTGTTTTCGGCCGACCGATGGG
TTAGTCTGCTGATTGGACTGCCATATTCAGTGCCCGAAAATCTCTGTGAT
CTTTATATTCCTCCACCAGATGAGGAGTTGTTCGTCAACTTTCACTACCG
ACACCTATCTATTTTGACTGGCCGGGTCATTGATTGTCTGCAGTCTGAGA
AAAGCCCTACTTTATCCATGGTTACGGGAGTTGATGAGCAAATCGACGAA
ATTACGGCACATTTACCAGTCGGATATCTGGATCTGGGGCAGATTAGACT
ATGTCGAGATGCCAAAGAGAGACATACTCGGGCCTTCCGCCTGGCTCACG
TTCACAGCCTGAAGGCACAACTATACATGCCGTTATTCTTGCAGGGGTCC
CATGACGATAGGCAAGAGTATAGTCGGATGGCTTGTGTGAGGAGCGCAAG
GACTCTTCTAGAAGCGTACCTTCTCCTGCATGAGAGTGACCCTGCTGCGG
CACGCTCAGATAATAGCATCAAACAGTCGGCACCGAGTGCGCTGACAGCA
GCGGTGATTGTCTTCCTGAATATGCTCGGCTATGGGAGGAATACTGCCGC
AGATGCAGTACAAGAGAGAGCTACCAATAAAAATCATGATGATGGGTTGA
TCAAACGGATCCTGATCGCGCTGGACAGCTGGTCGGAGAATCAACCAGGT
TCATTGTCTGGCCAGTGCCATGCTACACTCAAAAACCTCGTGGAAAGCAG
TCAAGAATTGCACAAAGGAGAGCGTCGCGAGATTGTCGTGCCGTACTTTG
GCAGGGTGACTGTCGACCGCGGAGAGGGCGCTTCGCAGCCTGCCGATTCT
AGGCTAGATACTTCACGTGGAGCAGCCCCTATGTTGGAATCGAATGTCGA
TAACGTCGCTACTTGGTCTGCCCTGTCCGATGATATTTTCCTTTCGTATT
CCGGTCCATGGACAGCGCAAGACGATTATGCAGGGGGGCTTTTAGACAAT
ACCGATGCAGCAGCAGCAGCTTTCGATTGGATAACTGGGCCTGAGTACGG
CTTTAGCCTATGCTAAGTCGTCGCCGGAAAGTTCGCTGCATCTTTCCGTC
CGAAGAATCTGACGTGTGCTCCAATTGTGCCAGGCGAGGGTCTATATGTG
TTCCGCAAGGTGTATCACTAGATTTGGGCCCTGGATTTGATGATAGAGCA
CGTCTACGTCGCCGAGCCAAGTCGCGACACCTAAATAACCAGTCCGTGCC
GCAAGCCACACCCGACGGGGAGACCATCAGTGGCTCGGACCGGTTCAGTG
ACGTCCTGGGGGCTCTGAAAAATCTAGAGAAAAAGGTCCATGTATCACTA
GGATTGAGTCGTAACCATGCTCCAGCCCGAGGTGTCGTTGGGACATCACG
TGAGGTCGACTCAATACAGAGTGATCGTGCCCCGATCATGAAGCTTTTGA
ACCATGAATTGATGCATGCATCGATAGTTGAGTCAGTTCATGGTTCGGAC
GAAAGAGGCTCGGACGGACTTCCTCGCCACGCTTTCTCCAGCCGCAAATC
CGACCGAACTTTACTCCGACCTCATCTTCGTCCGAACAGAGTGGGTCAGT
CCAACCAGCCGTTGAAGCTCTGCATAGTCAAAGCGCCCCTGATGATTCAG
AATCGGCAAATGAGAAAAGGGACGCGCAGCTGTACTGCATATCGGTCGAG
TTTCCGAGCCTGAGCAAGAGGCATCTCAACAAGTACCAAGTCAAGAATCT
AAGCGCAACAAAACCCGCCTCTCCAACCTGCCCACTGAACATGCTGAAGC
GCTCAAAGGCCTACTTGAGGCATTACCAACAGAGCCAGAGATGAGCAGAA
TATTCCAGACTAAAAGTGACTGGTGGAACTCCTGGCGCGAATCCTTCGGG
CTAAGCTGGGGCGATGAAGACGATTTCAGCCTTGAGGCGTTCGCTATTCG
GACTTTCCAGACCGGTCATCCCGCTCTAGTCGGAAGCCTCCTACTCTGCT
TTGCTCTCAGCACGGGCGATTTTGCAAGATACCTTCCTCCAGTAGAACAT
TGGATCCTGAATAACGATGAAGTTGCTAGCAGTACATATGGCCTGCAGTG
CTTGATAGGCCTAGGACTCTGCTTCATGAGCTCCTTACAACCTCGTCGTG
CCTGGGCTACATATCGTAAGGCTAATACGCTTTTGCAACTTGCAGGAATC
CATCGGACTCACCGGAAGTCCAAGAGTCTGAATACAATTTTCTGGCAGTT
GTTTTCGGCCGACCGATGGGTTAGTCTGCTGATTGGACTGCCATATTCAG
TGCCCGAAAATCTCTGTGATCTTTATATTCCTCCACCAGATGAGGAGTTG
TTCGTCAACTTTCACTACCGACACCTATCTATTTTGACTGGCCGGGTCAT
TGATTGTCTGCAGTCTGAGAAAAGCCCTACTTTATCCATGGTTACGGGAG
TTGATGAGCAAATCGACGAAATTACGGCACATTTACCAGTCGGATATCTG
GATCTGGGGCAGATTAGACTATGTCGAGATGCCAAAGAGAGACATACTCG
GGCCTTCCGCCTGGCTCACGTTCACAGCCTGAAGGCACAACTATACATGC
CGTTATTCTTGCAGGGGTCCCATGACGATAGGCAAGAGTATAGTCGGATG
GCTTGTGTGAGGAGCGCAAGGACTCTTCTAGAAGCGTACCTTCTCCTGCA
TGAGAGTGACCCTGCTGCGGCACGCTCAGATAATAGCATCAAACAGTCGG
CACCGAGTGCGCTGACAGCAGCGGTGATTGTCTTCCTGAATATGCTCGGC
TATGGGAGGAATACTGCCGCAGATGCAGTACAAGAGAGAGCTACCAATAA
AAATCATGATGATGGGTTGATCAAACGGATCCTGATCGCGCTGGACAGCT
GGTCGGAGAATCAACCAGGTTCATTGTCTGGCCAGTGCCATGCTACACTC
AAAAACCTCGTGGAAAGCAGTCAAGAATTGCACAAAGGAGAGCGTCGCGA
GATTGTCGTGCCGTACTTTGGCAGGGTGACTGTCGACCGCGGAGAGGGCG
CTTCGCAGCCTGCCGATTCTAGGCTAGATACTTCACGTGGAGCAGCCCCT
ATGTTGGAATCGAATGTCGATAACGTCGCTACTTGGTCTGCCCTGTCCGA
TGATATTTTCCTTTCGTATTCCGGTCCATGGACAGCGCAAGACGATTATG
CAGGGGGGCTTTTAGACAATACCGATGCAGCAGCAGCAGCTTTCGATTGG
ATAACTGGGCCTGAGTACGGCTTTAGCCTATGCTAAGTCGTCGCCGGAAA
GTTCGCTGCATCTTTCCGTCCGAAGAATCTGACGTGTGCTCCAATTGTGC
CAGGCGAGGGTCTATATGTGTTCCGCAAGGTGTATCACTAGATTTGGGCC
CTGGATTTGATGATAGAGCACGTCTACGTCGCCGAGCCAAGTCGCGACAC
CTAAATAACCAGTCCGTGCCGCAAGCCACACCCGACGGGGAGACCATCAG
TGGCTCGGACCGGTTCAGTGACGTCCTGGGGGCTCTGAAAAATCTAGAGA
AAAAGGTCCATGTATCACTAGGATTGAGTCGTAACCATGCTCCAGCCCGA
GGTGTCGTTGGGACATCACGTGAGGTCGACTCAATACAGAGTGATCGTGC
CCCGATCATGAAGCTTTTGAACCATGAATTGATGCATGCATCGATAGTTG
AGTCAGTTCATGGTTCGGACGAAAGAGGCTCGGACGGACTTCCTCGCCAC
GCTTTCTCCAGCCGCAAATCCGACCGAACTTTACTCCGACCTCATCTTCG
TCCGAACAGAGTGGGTCAGTCCAACCAGCCGTTGAAGCTCTGCATAGTCA
AAGCGCCCCTGATGATTCAGAATCGGCAAATGAGAAAAGGGACGCGCAGC
TGTACTGCAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010926KJC3_010926Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010926-T1KJC3_010926-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010926-T1.cdsKJC3_010926-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010926-T1.exon3KJC3_010926-T1.exon3Aspergillus niger KJC3exon
KJC3_010926-T1.exon2KJC3_010926-T1.exon2Aspergillus niger KJC3exon
KJC3_010926-T1.exon1KJC3_010926-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4701945..4704276 -
Powered by Drupal