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KJC3_010937-T1, KJC3_010937-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010937-T1
Unique NameKJC3_010937-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4728576..4730111-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010937-T1 ID=KJC3_010937-T1|Name=KJC3_010937-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1536bp|location=Sequence derived from alignment at ch7:4728576..4730111- (Aspergillus niger KJC3)
ATGAAACCTTGTCACTAGACAGGGTTAGCCAAAAAGGCTTCGATCGTTCG
ATATGCCAATCACGGCTCGCCAACGACTCTATCTTCTGCAGAAATAGTCG
CCAGGGTAGACGACCGTGTTTCGCGTGGCCCACCCTCGTATACCGTTACT
TTCGGCACTTTGGAGGCGTGAAGGATTCATGCCTGGCGCCCATTCTTGCA
CCAATGGGAGAATCGGATTGCTTGTGCGTGCTGTGGGCGCCTTCAGGCTT
GCTGTGAGTCGAGGCTGTTAATAGATACAACATTCTGGGTTTCAAGAGCC
GGGTGCGGTACTGCGTTTGATTGCACATGCAAGCCTTCTTCTTGTGGCTG
TCGGTCTGTTGGAAATATTTCTTATATAGCCCTTCTTCCAGCTGGATACA
TCCTCGATTTTTTCTCTTCAGGTTTCCAGCCATCCTATAGTCAGTGCTCA
AGAAGAGAGCTCTACTCTTCCTTTTCTCTCCTTCAACTCTTCACAATTGC
TATTATTCTTCTGAGTTACCATTCAGCATTTGTCCTTGAGCTTCCAATTT
CAATCCTCGCATACAGTGTATGCTATCTTTGAACTTGCCACCATCTCCTC
ATACATCAACTTTGTATCAAGCATCCGGAATGCGTGCGAACCTCTTTCTC
CTGGGCTGCCTGACAGCAGGCTCCATGGCAGCGCCAACCCTCCTCAACGA
CATATACGACTATTCGTCGGACTTAGCCACCTACCTCGGAAAAGTGAGCA
AGTACATCGAGAGCACGGGAGAAGAACTCATTAAGAGCGCCAACTCATGC
GATACATCCAAAATTTCTCTTCCATCATACGCCTCCAGCCTGCCCTCACC
ATCCGGAATGAGCCCAATCTATGTGGCAGTCGGCCGTGGCACCCAGGTAA
GCAGAAGAAGACCCGCCTACTGTCACACAGTCAATGCAGGGGGAGACCCG
GCCGAACTGACAAGCCCCTCCTTAGAACTACACCTGCGCCACCTCGACCT
CGGACTCAACGCCCCAAGCCATAGGTGCAGTGGCGCGTCTTTACAACGCG
ACCTGCATCGCGGCCAATTACCCGGACATGTTGTCGTTACTCCCGGGTAT
AGTGTACAAGGAACAGTTGCCCAGTAACGAGGAGGATCCCCTCCCGCCGG
CGAACTTTGAACTCTTGGGTCACCATTTCTTCAGAGATACGACTACCCCG
GTTTTTAACCTGGATACTTTGCCATCTCGGCAGTATGGGATTGCGATCAC
AAAGAAACAAGACTCGCTTGATGCTCCATCGAGTGCTATTCAGGGTAGCA
ATGGGGCTGTCCAGTGGCTTTACCTGACCACTATCAATGGTACAGTCGGT
GAGTATAAAGCGGTCTATCGAGTAGACACGGTTGCCGGTGCAGCTCCGAA
GACCTGCCAGGGGATGCAGTCGGTGTTCACTGTTCAGTATGCGGCCAATT
ACTATTTCTATGGTGCATGACGGCGAGTGATGTACAGAGCAGTTGCACTG
TTAATAGACGGAAATGAGACAATTTTTCATGACAGG
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Coding sequence (CDS) from alignment at ch7:4728576..4730111-

>KJC3_010937-T1 ID=KJC3_010937-T1|Name=KJC3_010937-T1|organism=Aspergillus niger KJC3|type=CDS|length=1644bp|location=Sequence derived from alignment at ch7:4728576..4730111- (Aspergillus niger KJC3)
AACTACACCTGCGCCACCTCGACCTCGGACTCAACGCCCCAAGCCATAGG
TGCAGTGGCGCGTCTTTACAACGCGACCTGCATCGCGGCCAATTACCCGG
ACATGTTGTCGTTACTCCCGGGTATAGTGTACAAGGAACAGTTGCCCAGT
AACGAGGAGGATCCCCTCCCGCCGGCGAACTTTGAACTCTTGGGTCACCA
TTTCTTCAGAGATACGACTACCCCGGTTTTTAACCTGGATACTTTGCCAT
CTCGGCAGTATGGGATTGCGATCACAAAGAAACAAGACTCGCTTGATGCT
CCATCGAGTGCTATTCAGGGTAGCAATGGGGCTGTCCAGTGGCTTTACCT
GACCACTATCAATGGTACAGTCGGTGAGTATAAAGCGGTCTATCGAGTAG
ACACGGTTGCCGGTGCAGCTCCGAAGACCTGCCAGGGGATGCAGTCGGTG
TTCACTGTTCAGTATGCGGCCAATTACTATTTCTATGGTGCATGAATGCT
ATCTTTGAACTTGCCACCATCTCCTCATACATCAACTTTGTATCAAGCAT
CCGGAATGCGTGCGAACCTCTTTCTCCTGGGCTGCCTGACAGCAGGCTCC
ATGGCAGCGCCAACCCTCCTCAACGACATATACGACTATTCGTCGGACTT
AGCCACCTACCTCGGAAAAGTGAGCAAGTACATCGAGAGCACGGGAGAAG
AACTCATTAAGAGCGCCAACTCATGCGATACATCCAAAATTTCTCTTCCA
TCATACGCCTCCAGCCTGCCCTCACCATCCGGAATGAGCCCAATCTATGT
GGCAGTCGGCCGTGGCACCCAGAACTACACCTGCGCCACCTCGACCTCGG
ACTCAACGCCCCAAGCCATAGGTGCAGTGGCGCGTCTTTACAACGCGACC
TGCATCGCGGCCAATTACCCGGACATGTTGTCGTTACTCCCGGGTATAGT
GTACAAGGAACAGTTGCCCAGTAACGAGGAGGATCCCCTCCCGCCGGCGA
ACTTTGAACTCTTGGGTCACCATTTCTTCAGAGATACGACTACCCCGGTT
TTTAACCTGGATACTTTGCCATCTCGGCAGTATGGGATTGCGATCACAAA
GAAACAAGACTCGCTTGATGCTCCATCGAGTGCTATTCAGGGTAGCAATG
GGGCTGTCCAGTGGCTTTACCTGACCACTATCAATGGTACAGTCGGTGAG
TATAAAGCGGTCTATCGAGTAGACACGGTTGCCGGTGCAGCTCCGAAGAC
CTGCCAGGGGATGCAGTCGGTGTTCACTGTTCAGTATGCGGCCAATTACT
ATTTCTATGGTGCATGAATGCTATCTTTGAACTTGCCACCATCTCCTCAT
ACATCAACTTTGTATCAAGCATCCGGAATGCGTGCGAACCTCTTTCTCCT
GGGCTGCCTGACAGCAGGCTCCATGGCAGCGCCAACCCTCCTCAACGACA
TATACGACTATTCGTCGGACTTAGCCACCTACCTCGGAAAAGTGAGCAAG
TACATCGAGAGCACGGGAGAAGAACTCATTAAGAGCGCCAACTCATGCGA
TACATCCAAAATTTCTCTTCCATCATACGCCTCCAGCCTGCCCTCACCAT
CCGGAATGAGCCCAATCTATGTGGCAGTCGGCCGTGGCACCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010937KJC3_010937Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010937-T1KJC3_010937-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010937-T1.cdsKJC3_010937-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010937-T1.utr3p1KJC3_010937-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010937-T1.exon2KJC3_010937-T1.exon2Aspergillus niger KJC3exon
KJC3_010937-T1.exon1KJC3_010937-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010937-T1.utr5p1KJC3_010937-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021851
DBxrefInterPro:IPR021706
DBxrefPFAM:PF11937
DBxrefPFAM:PF11693
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4728576..4730111 -
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