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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4750685..4754427- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010945-T1 ID=KJC3_010945-T1|Name=KJC3_010945-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3743bp|location=Sequence derived from alignment at ch7:4750685..4754427- (Aspergillus niger KJC3)
GCGGCGTATTGATGTATTGTCATAACATGTCATGTATGTTTAATGACCAG
CGGAAGAGCCCGGCGGGACTCCGCCCTGCCTTAGGTAAGCGATAACCGGT
CACTCGTCAGTTCCTCTCGCTGGGTTTGCAGGAGAGGAGTGGAAAGTCGG
TTGCTGTGTTGTTAGCCATCAGGGGTCGAAAGAGACCAAGTACAGTTTAG
AGTCCATGGAAAGGGGAGTTTAGTCAAGAATAATCATGCGGATCACCCAG
GAACTCAGCGGGAATACAAGACAGACAGACAGACAGACACACAGACAGAA
GAAAAAACATCCCTATCGTCCAGGCGCGATCAGGCTACCATTTGTTTTGC
GGAAGATCGCCATCACCCACTTGCAGGCCCTTTAGCTCGGTCCACTCGGC
ATCTCCCATCGTCTGGCTGCTGCCAATGAGGACGGCAAGTTGGGGGAGGA
TGTATCAAAGCAGTAGGTAACTTACTATCTAGTCAGTCACTCACTATCCC
AGTCCGTTCATTAGTTCCCTATCAATCCCATCCTCTCGCCCGTTCCGCCA
TCCGCAGCGTCACCAGCATCCATTCGGGGGTATTATTGGCCATCACTTCC
ACCATCCCGTCCCTGCAGTCTGCTGGTTGGGACATTCTGTTTTTGCTGTG
CTGCTACAGCTGCTACAGCTAGCGAGTAGTAGTTAGTAGTGAGTACTGAG
TAAATAGATATCGTCCCATCCAGTCCTTGTTCTGCGCCTTTTATCTTTTC
GTCCCATGTCTCTAACAAACTACTAAGAAACTAAACTTGGCCAACGGCTT
CCCCCAACCCTCTTCCTCCCGGCCGTAACTCCGTCCGCCTTTACCTGCCG
GTTCGTCCTCCTAACTTTCCTTTCTCTTGCCTCTTCCCCCATCTCTCCTC
CTCGCTCTCTCTTCTCTCTTTCTCCCTCCCTCTCCCTCCTCTCTCCTCTC
CTCCTCTCCGGCCTCTATCCTCTCTCCTCTCCATCCTTCTCTCTTTCTTC
CTCTTCTCCTCTTCTCCCTCCCCCCTTTCCCCTTCCACTCCCTCTTCCCT
CTCCCACTTCTTCCCTACTCTCTTCTTCCCTGGTTATTCTTCCTCCCCCA
CATTTTCTTCCCTCCCGACACTGGATCCTCCCCCCCTCCCACCCCCCATT
TTCCCAAGCTATTTTTTTTTTCCGTTGGGGTCGCCGATTACCTAACTCGA
ACGCAGCACGCGCTGCCCAGTGGCTGAACCTGAACCCGCACTCTGGAGCC
TGATGCTCCGCCATCGGCAGCCCGTCTTTCGCCAGTCTTCTCATTACTCA
TTTCTTCTATAAACCCGTTTTTCCTCTCTGGGTTCCTCCCATTTATCCCT
CCCCCTCCCTGCCCCGTATTTTCCGCGACTCCTCGCTTCGTCGCAATCCA
CCCGGATTTACTTCCTCACTGTCTTCCTTGGTCGCCTGCTACCTCCGGCA
TCACCATGGAGTCCAGAACCGCGACGGCTGAGCCGTCGAGTAAACGACCG
CGCTCACCTTCCGGCGATTTCCCTCCTATCGCATCCAAGGTTCCCAAAAC
CCATTCCAATCACCTGCAGATCAACTACCTCGCCCGCCAATACCCTGACA
ACCTTCCTCTCGTCTCCGTCGATGATACCATGCCCGCCATTGTGCATCTC
ATTGGTGAGTACGACGGCGTCTTACATCGTCACGAAAGCATCGCTGGGAA
CTTGGGCGCCTGTCCGCTGGGGCCCATCTTGATCAAGCGCTTTGAGCGCT
TGTTCGATGGGCCGCCTCGCGTGCTCAAGTCGCATGGCAAGGACTCCCCC
AACGTGACCTGGCTGGATGTAGTCGAGTTTGCCAAGAACAAACCTGAGCA
GTTCAACCTGGAAAAGTCGCGCAACGGGGTGCGAGTGTGCCAATTCTATA
CCAAGCAGTGTCGGGTGGAGATCAGCGAGGAGGACTTTGTGTTGATCGCC
TCGGGGATGCCCCAGAAGATGATCCCCCCGCAGCCGATCATTGAGGATGA
GGAGAAGGAATTGGGCGCATTGGAGATTCTGGAGAAGAACCTCCAGCAGA
TCATCCAGATGGCCGACCAGGGTATGACCTTTGACATGATTTTTTGTATT
ACAGTCTAAAACTAATCATCGTTGCTAGTGTCTGCCCGCGCCCGACAACT
GAACCACCGTTTGAAAAACCGCCGAACGGCGATTGTCACTCGGCGGGAGA
ACGACATGTCGCTCCACTCGCAGCGACAGCAACAACAACAACAGCAGCAA
CAACATCGTTCCATCAGCCCTGCCTGGCGCGATGCCAATGGCCATGCCCA
GAATCCAAATGGCAGTACCCCTGCTAGCGCCCAGTCTCCCTCCACTGGTT
TTGTTGCCGTGAATGCCGGCCGGCCCGGCGGCGGAGAAGCCACTGTGGAG
GAGAATGCGCTGTCATCGCAGTTTATGTTCTCGCATTCCAATACGGACAA
CGTTACTATCATCAACGGCACCTCGATCAAAGGCGCCTCGCCGACGACCC
GCGCCGAGCTCATGAAAAAGTTCTTCACAACTCAGGATCGGCAGGCGCGC
AGCATTGAAGAGGGACCCGGCTCCAATAGCCGGCAGTCTTCCCGGCCGCG
GCCGCGAGCGTCGGATGCGGCGGACTACAATCTGTACACTCCGGCACCGA
CTACGGTTGCTATTCCCAATACACCGTCGTCGCTTCTGCCTCCGCCCAAG
TCCCACCACCACGAAAAGGATGACGGCGGCCCGCACAAGATGGAGATGGT
GGCGCGCATGGAAGAACTACAGCGGGGCGAGCGCATCTTGCCGCCCTGCG
ATCGCTGTCGTCGGCTACACATGGATTGTCTGAAGAACCTGACCGCCTGC
ATGGGGTGCACCAAGAAACACGCCAAGTGTTCCTGGAAGGACGTGAAGGA
GGACGAGCTACGTGAGACGCGCGTCGACCGCACGTCCCGGGAGCGAGCGG
AGGAGCCGCCTTCGTCCAAGGAGGCCTCTGCGACCCATCCACTGCCCACT
CCTGTGGCAGCACCACCGTCGTCGACGGCAGCCCCCACCCCGGTGTCTGG
GCCACTGTTGCCCGAGACGGAGCCGCGACCTCGCGAGCGCGAGATTGCGT
CCGAGTACAGCGTGCGCCGCGAGTCTGCGCCGACGGGCGGACCGATTGCG
GGGATGGCGCTGGCCAAGGAGACGTCACCGCGGCGAGCCATGAGCGAGAT
GCATGGGAGCAGCGGGATGAGCCACGAGCGGCGGGTCAGCCTGCATCGGC
ACGCGGAGGCGGACGACGATGATCCGGATGCCAACCAGCGGCTGATGCAG
GCGATTCTGGATACGGTGGACCACCACACGCGGGTGGCGGCGGCGGTGAA
GGAGGGGCATGAAGTGAGCAACGAGCGGGAGCGGGAGCGCGAGCAGGAAC
GAGAGCGGGAGCGGAAGTTGGTGCGGGCGTAGCTTTGACCCGACTTTTTG
TTTGGGAATTATGGATATGGATACCTTGGACAGGACATGGGAGTTGTATT
TAGGTTTTTGATTGAGCGAGTTAGCGGATATCCCGGTTTGAATTCTGGAT
GAAATGATGGATTGGATGGATTGGATAGCATGGATGGGCATAGCATAATG
TGACTGCATATGCATACAGGATCTACTCTGTACAGAAGAACCAGTGAATG
TGTGTCGGAGTTTGTCATTCCCGCCGCGGCACCAACTGCCGATGGGCGAT
CCGCACCCCGCAGACACTTGATCCTAATAGATCTGAACACTAC back to topCoding sequence (CDS) from alignment at ch7:4750685..4754427- >KJC3_010945-T1 ID=KJC3_010945-T1|Name=KJC3_010945-T1|organism=Aspergillus niger KJC3|type=CDS|length=3840bp|location=Sequence derived from alignment at ch7:4750685..4754427- (Aspergillus niger KJC3)
TGTCTGCCCGCGCCCGACAACTGAACCACCGTTTGAAAAACCGCCGAACG
GCGATTGTCACTCGGCGGGAGAACGACATGTCGCTCCACTCGCAGCGACA
GCAACAACAACAACAGCAGCAACAACATCGTTCCATCAGCCCTGCCTGGC
GCGATGCCAATGGCCATGCCCAGAATCCAAATGGCAGTACCCCTGCTAGC
GCCCAGTCTCCCTCCACTGGTTTTGTTGCCGTGAATGCCGGCCGGCCCGG
CGGCGGAGAAGCCACTGTGGAGGAGAATGCGCTGTCATCGCAGTTTATGT
TCTCGCATTCCAATACGGACAACGTTACTATCATCAACGGCACCTCGATC
AAAGGCGCCTCGCCGACGACCCGCGCCGAGCTCATGAAAAAGTTCTTCAC
AACTCAGGATCGGCAGGCGCGCAGCATTGAAGAGGGACCCGGCTCCAATA
GCCGGCAGTCTTCCCGGCCGCGGCCGCGAGCGTCGGATGCGGCGGACTAC
AATCTGTACACTCCGGCACCGACTACGGTTGCTATTCCCAATACACCGTC
GTCGCTTCTGCCTCCGCCCAAGTCCCACCACCACGAAAAGGATGACGGCG
GCCCGCACAAGATGGAGATGGTGGCGCGCATGGAAGAACTACAGCGGGGC
GAGCGCATCTTGCCGCCCTGCGATCGCTGTCGTCGGCTACACATGGATTG
TCTGAAGAACCTGACCGCCTGCATGGGGTGCACCAAGAAACACGCCAAGT
GTTCCTGGAAGGACGTGAAGGAGGACGAGCTACGTGAGACGCGCGTCGAC
CGCACGTCCCGGGAGCGAGCGGAGGAGCCGCCTTCGTCCAAGGAGGCCTC
TGCGACCCATCCACTGCCCACTCCTGTGGCAGCACCACCGTCGTCGACGG
CAGCCCCCACCCCGGTGTCTGGGCCACTGTTGCCCGAGACGGAGCCGCGA
CCTCGCGAGCGCGAGATTGCGTCCGAGTACAGCGTGCGCCGCGAGTCTGC
GCCGACGGGCGGACCGATTGCGGGGATGGCGCTGGCCAAGGAGACGTCAC
CGCGGCGAGCCATGAGCGAGATGCATGGGAGCAGCGGGATGAGCCACGAG
CGGCGGGTCAGCCTGCATCGGCACGCGGAGGCGGACGACGATGATCCGGA
TGCCAACCAGCGGCTGATGCAGGCGATTCTGGATACGGTGGACCACCACA
CGCGGGTGGCGGCGGCGGTGAAGGAGGGGCATGAAGTGAGCAACGAGCGG
GAGCGGGAGCGCGAGCAGGAACGAGAGCGGGAGCGGAAGTTGGTGCGGGC
GTAGATGGAGTCCAGAACCGCGACGGCTGAGCCGTCGAGTAAACGACCGC
GCTCACCTTCCGGCGATTTCCCTCCTATCGCATCCAAGGTTCCCAAAACC
CATTCCAATCACCTGCAGATCAACTACCTCGCCCGCCAATACCCTGACAA
CCTTCCTCTCGTCTCCGTCGATGATACCATGCCCGCCATTGTGCATCTCA
TTGGTGAGTACGACGGCGTCTTACATCGTCACGAAAGCATCGCTGGGAAC
TTGGGCGCCTGTCCGCTGGGGCCCATCTTGATCAAGCGCTTTGAGCGCTT
GTTCGATGGGCCGCCTCGCGTGCTCAAGTCGCATGGCAAGGACTCCCCCA
ACGTGACCTGGCTGGATGTAGTCGAGTTTGCCAAGAACAAACCTGAGCAG
TTCAACCTGGAAAAGTCGCGCAACGGGGTGCGAGTGTGCCAATTCTATAC
CAAGCAGTGTCGGGTGGAGATCAGCGAGGAGGACTTTGTGTTGATCGCCT
CGGGGATGCCCCAGAAGATGATCCCCCCGCAGCCGATCATTGAGGATGAG
GAGAAGGAATTGGGCGCATTGGAGATTCTGGAGAAGAACCTCCAGCAGAT
CATCCAGATGGCCGACCAGGTGTCTGCCCGCGCCCGACAACTGAACCACC
GTTTGAAAAACCGCCGAACGGCGATTGTCACTCGGCGGGAGAACGACATG
TCGCTCCACTCGCAGCGACAGCAACAACAACAACAGCAGCAACAACATCG
TTCCATCAGCCCTGCCTGGCGCGATGCCAATGGCCATGCCCAGAATCCAA
ATGGCAGTACCCCTGCTAGCGCCCAGTCTCCCTCCACTGGTTTTGTTGCC
GTGAATGCCGGCCGGCCCGGCGGCGGAGAAGCCACTGTGGAGGAGAATGC
GCTGTCATCGCAGTTTATGTTCTCGCATTCCAATACGGACAACGTTACTA
TCATCAACGGCACCTCGATCAAAGGCGCCTCGCCGACGACCCGCGCCGAG
CTCATGAAAAAGTTCTTCACAACTCAGGATCGGCAGGCGCGCAGCATTGA
AGAGGGACCCGGCTCCAATAGCCGGCAGTCTTCCCGGCCGCGGCCGCGAG
CGTCGGATGCGGCGGACTACAATCTGTACACTCCGGCACCGACTACGGTT
GCTATTCCCAATACACCGTCGTCGCTTCTGCCTCCGCCCAAGTCCCACCA
CCACGAAAAGGATGACGGCGGCCCGCACAAGATGGAGATGGTGGCGCGCA
TGGAAGAACTACAGCGGGGCGAGCGCATCTTGCCGCCCTGCGATCGCTGT
CGTCGGCTACACATGGATTGTCTGAAGAACCTGACCGCCTGCATGGGGTG
CACCAAGAAACACGCCAAGTGTTCCTGGAAGGACGTGAAGGAGGACGAGC
TACGTGAGACGCGCGTCGACCGCACGTCCCGGGAGCGAGCGGAGGAGCCG
CCTTCGTCCAAGGAGGCCTCTGCGACCCATCCACTGCCCACTCCTGTGGC
AGCACCACCGTCGTCGACGGCAGCCCCCACCCCGGTGTCTGGGCCACTGT
TGCCCGAGACGGAGCCGCGACCTCGCGAGCGCGAGATTGCGTCCGAGTAC
AGCGTGCGCCGCGAGTCTGCGCCGACGGGCGGACCGATTGCGGGGATGGC
GCTGGCCAAGGAGACGTCACCGCGGCGAGCCATGAGCGAGATGCATGGGA
GCAGCGGGATGAGCCACGAGCGGCGGGTCAGCCTGCATCGGCACGCGGAG
GCGGACGACGATGATCCGGATGCCAACCAGCGGCTGATGCAGGCGATTCT
GGATACGGTGGACCACCACACGCGGGTGGCGGCGGCGGTGAAGGAGGGGC
ATGAAGTGAGCAACGAGCGGGAGCGGGAGCGCGAGCAGGAACGAGAGCGG
GAGCGGAAGTTGGTGCGGGCGTAGATGGAGTCCAGAACCGCGACGGCTGA
GCCGTCGAGTAAACGACCGCGCTCACCTTCCGGCGATTTCCCTCCTATCG
CATCCAAGGTTCCCAAAACCCATTCCAATCACCTGCAGATCAACTACCTC
GCCCGCCAATACCCTGACAACCTTCCTCTCGTCTCCGTCGATGATACCAT
GCCCGCCATTGTGCATCTCATTGGTGAGTACGACGGCGTCTTACATCGTC
ACGAAAGCATCGCTGGGAACTTGGGCGCCTGTCCGCTGGGGCCCATCTTG
ATCAAGCGCTTTGAGCGCTTGTTCGATGGGCCGCCTCGCGTGCTCAAGTC
GCATGGCAAGGACTCCCCCAACGTGACCTGGCTGGATGTAGTCGAGTTTG
CCAAGAACAAACCTGAGCAGTTCAACCTGGAAAAGTCGCGCAACGGGGTG
CGAGTGTGCCAATTCTATACCAAGCAGTGTCGGGTGGAGATCAGCGAGGA
GGACTTTGTGTTGATCGCCTCGGGGATGCCCCAGAAGATGATCCCCCCGC
AGCCGATCATTGAGGATGAGGAGAAGGAATTGGGCGCATTGGAGATTCTG
GAGAAGAACCTCCAGCAGATCATCCAGATGGCCGACCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010945-T1.utr3p1 | KJC3_010945-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4750685..4754427 - |
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