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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4762044..4764829+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010949-T1 ID=KJC3_010949-T1|Name=KJC3_010949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2786bp|location=Sequence derived from alignment at ch7:4762044..4764829+ (Aspergillus niger KJC3)
CACAGTATTATCGTTCCCCACGACTTCCCCTCCCTACCATCTCTCCTAGC
CACATCCTGATCTGCGTCTGTGGTGGTCTACTGCATGACTTAAACATTCT
TTAGGAGCTCGCTACTTTTTCTGCCCTTAGCTCCCCCTCTATATCCTTAT
TAGCTAGGCTATTCTGACGCACACGACTCCCGCGGCTCATCTATACCCCC
ATCACTCACGCCAGTTCCAGTTCCACTGGCCTCGCTGCTCCTTTCCAAGC
CATTCTGTTCATGGATGATATCGTCAATTGACCATGTCCACCTCCGGGCT
TGATATATCCCAACTCTCCGACAGCGAGAGGTCCGCTCTCGAGACTTATA
CTGCGGTCACCGGTCAGGAACATTCGGAAGCCATTCCTTTGTTGCGCCGC
TCACAATGGAATGTGCAGGTAAGGCCGGATGATGACATACTACCTTCAGA
TGTCATGGGAACTAATCAGTCGCTGCTTTCAGATCGCCATCTCCAAGTTC
TTTGACGGCGAAGGGCCGGATCCCGTCGAGGAAGCCCGCGCTGCTCTCAA
CTCCCCTCCTCCGCGACCCGCTCGACAGACACAAAACCTCATGACTGATG
ACATTGCTGCGCAATTTGCTCCGAATCCCCGTGCGGCCGAGCCAGCTCCT
CGGATAAATACCCAACCTGAAGATCAATCGGTCTATCGCCCGCCTTTCAT
ACTAGCTCTGCTGTTTACTCCGCTCAACCTCCTCTATCGACTACTCTACA
GCTCCTTCCGCCTCTTTGGTGCCTTGTTTCCCTTCCTTCCGCGCTTCTTT
AACACAACAGCGAATCCCGCTCTTCAAAGCTCCCGGAGAAATACCAACGG
TCGCCGGCCCTTGAGTCCCAAAGATACGGCCGCCCGGTTCATCCGGGAAT
TCGAGGAGGAATATGGCACCAACTCGATCAGTTTCCTCGAGAACGGATAT
AATATGGCGTTGGAGAAAGCCCACCGGGACCTCAAATTCCTCCTAGTTGT
GCTTCTTGCCCCCGAGCATGACGATACAAATGGCTGGGTCCGAGACACAT
TTCTATCTCGCGAAGTGACCGACTTTGTGAACGACCCGCAAAACGACTTG
CTTGTCTGGGGAGGGAATGTTCAAGACTCTGAGGCTTACCAGGTTGCCAA
CTCCATCCGCTGCACCAAGTTTCCCTTTGCAGCGGCACTAGTCCACACTC
CGAATGTTTCCTCGAATGCGATGTCGGTTGTGTCGAGAATATCTGGAACA
ATGTCCCCTGCGGAGTTTGTAGAGAAACTCCGATCGGCAATCTCGCAGCA
CAAGGAGCCTCTCGAGCGCATCCGGTCAACCCGGGCGGAGCAGCAAGCTT
CACGCAGCCTCCGTGAGCAGCAGGACTCCGCCTACGAGCGTTCTCTGGCC
ATTGACAGAGAGCGAGCGAGACAGAGGCGGGAAGCAGAGGCAGCCCGACA
GAGGGAAGAGCAAGAGGCAGCAGAACGTCGAGCGGCCGAGGAGAAGCGCA
TACATGATCTCCAGCAATGGAAGCAATGGCGGGCACAAACCATCACCGAG
GAACCCGGACCGGACGTCAAGGACGCTGTTCGCATTAGTATTCGACTGCC
TTCTGGCGAGCGTGTCATCCGCAAGTTTGCGCCTGACGCGTCGCTTGACG
AGCTCTACGCTTTTGTTGAATGCTACGATATCCTGAAGGAGCCAACAGAA
AAGGCTGCGGAAGCAGTGAAGCCGGAGGGCTTCGAACACCAGTATGGGTT
CCGGCTGGTTTCACCCATGCCGCGGGTGGTCTACGAAGTGGAGGCTGGGG
GATCAGTGCGGGACAAGATCGGCCGAGGAGGGAACCTTCTAGTCGAACCG
ATCGATGACGACAGCGACGAGGAGGACGAAGAAGAGGCATAAAGCTCTTG
GTCTGACGGTTGTAATTGTATTGTTTTCGCATCCTGGCTGCATGGCGCAA
GAATGGAGCTGTCCGGGTGATTTGCAGAGACTTTCCAGCAACTTGACTGT
CTTAGTATGTAATAACAAAGATCACGATAATGACACGGGAAAAGAAAGCC
CCAACGGCCCAGTGACGCTATGCCACCCTGCAGGAAGAGCCTCTGTGCGC
GGGTGTGGTTCCTAAACTCAATTTCTTGTAGCAGATGTGTGTAGTCATGT
GCGGTTTGGGTTCCCCCGGGAGGCCCGACAGCACGGAATCTTGGCCATCC
GAAGGCAGATGCAGAACGCGTTGCCCTCATTGTTTACTCTGCCAATTAAA
ATCGGTAGCGGCGTGTATCAGACATGATGAGCTCGTATGAGTCACATTGT
TATCATTGTCGGGGCTGCATGCTGATCCTGCCGTGGCTTGACCTCAGACC
GCACTTGTAACTTTATATTGAATCGGAAGTGATACAACACCCGATGGCGT
GGAGTCAAGGCTTTGCACTTCCCGAAAAGGCAAATCCCGCCAGTGATGAT
GCTCGGAAAGATTAGGCAGGAAGAGCACGTACGCATTCATATATTGGGCA
TGTTAAGCAAGGAATCTCACCGTGTTGGGCGGTGATTGGAACTATCCGGA
GTTTGGACATGAGTCTGAAGACAAGTCGTTGCGCTCTACCGAGTAGGTCA
TAGTAAGTACGAGATAACCGTTGACAGTAGGCGCACAGGGTTGGGTGAAG
ATTACCCACATGGATACGCAGGCCTGCTGTCATTCTGGGATCGCAGGTGC
CACATATTCAGCCATCCCAGCAGCGATCATCTGTGGAGCGAGTACATGAC
ACAGAGCCGCTCTTTATCTCGAGTCTGTAAGTAAGC back to topCoding sequence (CDS) from alignment at ch7:4762044..4764829+ >KJC3_010949-T1 ID=KJC3_010949-T1|Name=KJC3_010949-T1|organism=Aspergillus niger KJC3|type=CDS|length=3090bp|location=Sequence derived from alignment at ch7:4762044..4764829+ (Aspergillus niger KJC3)
ATGTCCACCTCCGGGCTTGATATATCCCAACTCTCCGACAGCGAGAGGTC
CGCTCTCGAGACTTATACTGCGGTCACCGGTCAGGAACATTCGGAAGCCA
TTCCTTTGTTGCGCCGCTCACAATGGAATGTGCAGATCGCCATCTCCAAG
TTCTTTGACGGCGAAGGGCCGGATCCCGTCGAGGAAGCCCGCGCTGCTCT
CAACTCCCCTCCTCCGCGACCCGCTCGACAGACACAAAACCTCATGACTG
ATGACATTGCTGCGCAATTTGCTCCGAATCCCCGTGCGGCCGAGCCAGCT
CCTCGGATAAATACCCAACCTGAAGATCAATCGGTCTATCGCCCGCCTTT
CATACTAGCTCTGCTGTTTACTCCGCTCAACCTCCTCTATCGACTACTCT
ACAGCTCCTTCCGCCTCTTTGGTGCCTTGTTTCCCTTCCTTCCGCGCTTC
TTTAACACAACAGCGAATCCCGCTCTTCAAAGCTCCCGGAGAAATACCAA
CGGTCGCCGGCCCTTGAGTCCCAAAGATACGGCCGCCCGGTTCATCCGGG
AATTCGAGGAGGAATATGGCACCAACTCGATCAGTTTCCTCGAGAACGGA
TATAATATGGCGTTGGAGAAAGCCCACCGGGACCTCAAATTCCTCCTAGT
TGTGCTTCTTGCCCCCGAGCATGACGATACAAATGGCTGGGTCCGAGACA
CATTTCTATCTCGCGAAGTGACCGACTTTGTGAACGACCCGCAAAACGAC
TTGCTTGTCTGGGGAGGGAATGTTCAAGACTCTGAGGCTTACCAGGTTGC
CAACTCCATCCGCTGCACCAAGTTTCCCTTTGCAGCGGCACTAGTCCACA
CTCCGAATGTTTCCTCGAATGCGATGTCGGTTGTGTCGAGAATATCTGGA
ACAATGTCCCCTGCGGAGTTTGTAGAGAAACTCCGATCGGCAATCTCGCA
GCACAAGGAGCCTCTCGAGCGCATCCGGTCAACCCGGGCGGAGCAGCAAG
CTTCACGCAGCCTCCGTGAGCAGCAGGACTCCGCCTACGAGCGTTCTCTG
GCCATTGACAGAGAGCGAGCGAGACAGAGGCGGGAAGCAGAGGCAGCCCG
ACAGAGGGAAGAGCAAGAGGCAGCAGAACGTCGAGCGGCCGAGGAGAAGC
GCATACATGATCTCCAGCAATGGAAGCAATGGCGGGCACAAACCATCACC
GAGGAACCCGGACCGGACGTCAAGGACGCTGTTCGCATTAGTATTCGACT
GCCTTCTGGCGAGCGTGTCATCCGCAAGTTTGCGCCTGACGCGTCGCTTG
ACGAGCTCTACGCTTTTGTTGAATGCTACGATATCCTGAAGGAGCCAACA
GAAAAGGCTGCGGAAGCAGTGAAGCCGGAGGGCTTCGAACACCAGTATGG
GTTCCGGCTGGTTTCACCCATGCCGCGGGTGGTCTACGAAGTGGAGGCTG
GGGGATCAGTGCGGGACAAGATCGGCCGAGGAGGGAACCTTCTAGTCGAA
CCGATCGATGACGACAGCGACGAGGAGGACGAAGAAGAGGCATAAATGTC
CACCTCCGGGCTTGATATATCCCAACTCTCCGACAGCGAGAGGTCCGCTC
TCGAGACTTATACTGCGGTCACCGGTCAGGAACATTCGGAAGCCATTCCT
TTGTTGCGCCGCTCACAATGGAATGTGCAGATCGCCATCTCCAAGTTCTT
TGACGGCGAAGGGCCGGATCCCGTCGAGGAAGCCCGCGCTGCTCTCAACT
CCCCTCCTCCGCGACCCGCTCGACAGACACAAAACCTCATGACTGATGAC
ATTGCTGCGCAATTTGCTCCGAATCCCCGTGCGGCCGAGCCAGCTCCTCG
GATAAATACCCAACCTGAAGATCAATCGGTCTATCGCCCGCCTTTCATAC
TAGCTCTGCTGTTTACTCCGCTCAACCTCCTCTATCGACTACTCTACAGC
TCCTTCCGCCTCTTTGGTGCCTTGTTTCCCTTCCTTCCGCGCTTCTTTAA
CACAACAGCGAATCCCGCTCTTCAAAGCTCCCGGAGAAATACCAACGGTC
GCCGGCCCTTGAGTCCCAAAGATACGGCCGCCCGGTTCATCCGGGAATTC
GAGGAGGAATATGGCACCAACTCGATCAGTTTCCTCGAGAACGGATATAA
TATGGCGTTGGAGAAAGCCCACCGGGACCTCAAATTCCTCCTAGTTGTGC
TTCTTGCCCCCGAGCATGACGATACAAATGGCTGGGTCCGAGACACATTT
CTATCTCGCGAAGTGACCGACTTTGTGAACGACCCGCAAAACGACTTGCT
TGTCTGGGGAGGGAATGTTCAAGACTCTGAGGCTTACCAGGTTGCCAACT
CCATCCGCTGCACCAAGTTTCCCTTTGCAGCGGCACTAGTCCACACTCCG
AATGTTTCCTCGAATGCGATGTCGGTTGTGTCGAGAATATCTGGAACAAT
GTCCCCTGCGGAGTTTGTAGAGAAACTCCGATCGGCAATCTCGCAGCACA
AGGAGCCTCTCGAGCGCATCCGGTCAACCCGGGCGGAGCAGCAAGCTTCA
CGCAGCCTCCGTGAGCAGCAGGACTCCGCCTACGAGCGTTCTCTGGCCAT
TGACAGAGAGCGAGCGAGACAGAGGCGGGAAGCAGAGGCAGCCCGACAGA
GGGAAGAGCAAGAGGCAGCAGAACGTCGAGCGGCCGAGGAGAAGCGCATA
CATGATCTCCAGCAATGGAAGCAATGGCGGGCACAAACCATCACCGAGGA
ACCCGGACCGGACGTCAAGGACGCTGTTCGCATTAGTATTCGACTGCCTT
CTGGCGAGCGTGTCATCCGCAAGTTTGCGCCTGACGCGTCGCTTGACGAG
CTCTACGCTTTTGTTGAATGCTACGATATCCTGAAGGAGCCAACAGAAAA
GGCTGCGGAAGCAGTGAAGCCGGAGGGCTTCGAACACCAGTATGGGTTCC
GGCTGGTTTCACCCATGCCGCGGGTGGTCTACGAAGTGGAGGCTGGGGGA
TCAGTGCGGGACAAGATCGGCCGAGGAGGGAACCTTCTAGTCGAACCGAT
CGATGACGACAGCGACGAGGAGGACGAAGAAGAGGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010949-T1.utr5p1 | KJC3_010949-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010949-T1.utr3p1 | KJC3_010949-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262E4T |
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR001012 |
| DBxref | InterPro:IPR006577 |
| DBxref | PFAM:PF00789 |
| DBxref | PFAM:PF14555 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4762044..4764829 + |
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