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KJC3_010954-T1, KJC3_010954-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010954-T1
Unique NameKJC3_010954-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4782082..4784766+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010954-T1 ID=KJC3_010954-T1|Name=KJC3_010954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2685bp|location=Sequence derived from alignment at ch7:4782082..4784766+ (Aspergillus niger KJC3)
ATGGCCATGAAGGGTGATACTGCTTGTCTGGTATGCCAGTGGTCCAATCA
CGCTTCTGTTGACCTAGCTAATATGTCTAGGCAGGGATCGCCTGTGGACC
GATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCCATTGGTG
AGGGAGCGAAGCCTGTGTTCAAGGTATACAGACAGCTGAGTTGCATGAAT
CGCTACAATATTTCTAGCTTACATATGCTAGTATTGTGGGGGAAATAGCC
ATCAATTATGGCATATACCTCGATTATGGGTGCGACAACTGTTAGCCGGG
TGGGCAGCATATGGAGTCCCTCTTAGTTGCCTCACCAAGCACGTGCTGTA
AGGCGGACATGGTGCCTTACGCTTAGGCATACCATAAGGTGACACCAAAG
TTGGGAAGGTCTTTTCTTGCTGGGAGGACTCGCGATCCCGAGGGGTTGTC
AATACTTGGAGTTTATATCCACGATTCCTGAGCAATGGCCGGCTTTTGAA
GCCAGCTGCTGAGAGAAATACTGGAGGGTGCAGGATTTGACGAGCAGATG
CAGTTGCATGCAGCACCGCTTCTCAGTTCGCAGCTAAAGTCTATTTTATC
TACTACTTAGCAGCCCTGCTCTCCCAAGCATGGAATGGCATAGTTTGATG
CTGATAGTCTTACATGTCGGAGCCCGTGGTGCTGGGAAGAGTCCTTGGGA
AAACTTGAAGCGCCATAGTATGCTTAATATTTCAGTGAAGCCGATCCTGG
GGCTGCTCAAAGTCTATCAACTATACCAGTCATATCAGCATTCGGCCTGT
CAAACGTGGGGAAGGCGGGCATTCTCCGCATCGGGATTTGAGGCCGAGCG
TCGATAGCCGACAGTGAACCAGAAAGAGTCATGCCAGTCTCTTCACAGCT
AGAAAGGGAGACGGAGCTATTTTTATTTTCATCTCATTGACACTGGCTTG
AGGATTCATGATATATATTAAGACATAACGCCAAGGACGAAAACGGATGT
CGTCTGCATGTTTGTGCTGATATCAGTTCTCAAGTACTTATCAGTTGCCG
AAAATATTGACCAGTTGGTGAAGGGGTTGAATTCGCATGGGACTGATCTA
TGCAACCCAGATAGGTTTAGCGTCTGCTTTTAGGAGAACAATATTCGATT
AGGGAATGCAACGAAACCAAAACTACCAGCACCTCACTTATTAGAGATAA
GTCTATAAGAGAATATTACATTCAACGTAGATAGCCTTGAGTTACCAAGA
ATAAGTATCGCGACACTTGTAACGCCATCGATCGACGAAATTGACATCGA
AGCAGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCG
GGCGGTGAGAGCGGCACCTACCCCAAGCCGCCTAGTGTTAGGGCTCCGAT
ACCCTAGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCT
CGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTC
ACCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGGTGAGTG
CTATATTCGCGTTTGATGCTATCGGTGGAAAATGGACATGTCAAAAAAGC
AAGGGAACAATATCCTGAAAGAAAGAACCGCTGCCCAACCTTTCGTTGTA
CCGGAATCCCTATCTATCATTTTCGATCCTGCGTTTTGGCCGTTGAAGGA
GAAAAAAAAAAGACTTCATACCGAACGATTTTCGACCTTCCCCTGCTATG
ATGAACTTCCGTCCACCGATATGCTATGTTATATGGAATTGTGTGCTTGG
AAAGAGGATATGAATGACATGCGAGGGATTGAATGAATGGTCTTGCTGAT
TGTTGGATTTTGTCGCCATCAGGTCCGTTACGCTGCTCAGGAGATTCCGG
CCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAG
AACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGC
CCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGC
GTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGTGAGTGGATGTGT
TTTTCTACGTTGAAGATTTTGGAAAAGAGACGGAAGTGAAAACAACGGAT
CGACAAGTGAACCGACATTGGCAGAATGTTTAGGGATGAAGAGGCTGGAT
GGATACTTTTTTTTGGAGGATATGGCAAAAATCAAACTTTTTGGCAAACG
AAGACGCTGACCGTCTTCTTTCTCTTTAGGCAAGCAGTGGGGTGTCAGCA
AGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAG
AACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGT
TGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCT
ACCGTGCTCACGGTCGTGTATGTTGAAGCCGGAATCCGAGACATCCCTCC
GTCACGAATCCCCGCAAAACTAACAATTCGATTAGATCAACCCCTACATG
ACCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGT
CGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTG
GTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAA
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Coding sequence (CDS) from alignment at ch7:4782082..4784766+

>KJC3_010954-T1 ID=KJC3_010954-T1|Name=KJC3_010954-T1|organism=Aspergillus niger KJC3|type=CDS|length=5838bp|location=Sequence derived from alignment at ch7:4782082..4784766+ (Aspergillus niger KJC3)
ATGGCCATGAAGGGTGATACTGCTTGTCTGGCAGGGATCGCCTGTGGACC
GATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCCATTGACA
ATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCGGCGG
GCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTCGCGATCTCAA
GTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCACCCGACATCG
AGGACCACCCGCTCGGCAACCACATCAAGATGGTCCGTTACGCTGCTCAG
GAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGT
CAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGC
TGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCT
GTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCAA
GCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCC
TTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCAAGGGTCTC
GACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAGGCTCCCAA
GGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTATCAACCCCTACATGA
CCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTC
GCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGG
TGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAAATGGCCATGAAGGGTG
ATACTGCTTGTCTGGCAGGGATCGCCTGTGGACCGATGACATTGACTACG
CGACTGATCGTTGCTCATACGGATGCCATTGACAATGAAGTTCCTGCGGA
CCGAAAGCTAAAGGGCATTACTGCCGGGCGGCGGGCGCCAAGAGCGAAAA
AGCGCACCACAACGAGCGAGCCTCGCGATCTCAAGTTCCAGCGGCCGACG
ACAGGAAAACGACAAAACTTCTCACCCGACATCGAGGACCACCCGCTCGG
CAACCACATCAAGATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTA
AGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACC
CGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTAC
CTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGT
ACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGC
AAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAA
GAACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCG
TTGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACC
TACCGTGCTCACGGTCGTATCAACCCCTACATGACCAACCCCTGCCACAT
CGAGCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTG
TCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGT
GCTCTCATTGAGGCATAAATGGCCATGAAGGGTGATACTGCTTGTCTGGC
AGGGATCGCCTGTGGACCGATGACATTGACTACGCGACTGATCGTTGCTC
ATACGGATGCCATTGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGC
ATTACTGCCGGGCGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAG
CGAGCCTCGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAA
ACTTCTCACCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATG
GTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCG
GGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTCAGG
CCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAACGTC
ACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCACCGG
TCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCG
TCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCAAC
GCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAGCACATCCA
GGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTCACGGTC
GTATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTTACC
GAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCT
CAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCAT
AAATGGCCATGAAGGGTGATACTGCTTGTCTGGCAGGGATCGCCTGTGGA
CCGATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCCATTGA
CAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCGGC
GGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTCGCGATCTC
AAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCACCCGACAT
CGAGGACCACCCGCTCGGCAACCACATCAAGATGGTCCGTTACGCTGCTC
AGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGT
GTCAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAA
GCTGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGG
CTGTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGC
AAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTT
CCTTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCAAGGGTC
TCGACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAGGCTCCC
AAGGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTATCAACCCCTACAT
GACCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCG
TCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGT
GGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAAATGGCCATGAAGGG
TGATACTGCTTGTCTGGCAGGGATCGCCTGTGGACCGATGACATTGACTA
CGCGACTGATCGTTGCTCATACGGATGCCATTGACAATGAAGTTCCTGCG
GACCGAAAGCTAAAGGGCATTACTGCCGGGCGGCGGGCGCCAAGAGCGAA
AAAGCGCACCACAACGAGCGAGCCTCGCGATCTCAAGTTCCAGCGGCCGA
CGACAGGAAAACGACAAAACTTCTCACCCGACATCGAGGACCACCCGCTC
GGCAACCACATCAAGATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGC
TAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACA
CCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTT
ACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCG
GTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCA
GCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTG
AAGAACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCT
CGTTGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCA
CCTACCGTGCTCACGGTCGTATCAACCCCTACATGACCAACCCCTGCCAC
ATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGC
TGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCC
GTGCTCTCATTGAGGCATAAATGGCCATGAAGGGTGATACTGCTTGTCTG
GCAGGGATCGCCTGTGGACCGATGACATTGACTACGCGACTGATCGTTGC
TCATACGGATGCCATTGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGG
GCATTACTGCCGGGCGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACG
AGCGAGCCTCGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACA
AAACTTCTCACCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGA
TGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCC
CGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTCA
GGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAACG
TCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCACC
GGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCC
CGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCA
ACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAGCACATC
CAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTCACGG
TCGTATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTTA
CCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGC
CTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGC
ATAAATGGCCATGAAGGGTGATACTGCTTGTCTGGCAGGGATCGCCTGTG
GACCGATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCCATT
GACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCG
GCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTCGCGATC
TCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCACCCGAC
ATCGAGGACCACCCGCTCGGCAACCACATCAAGATGGTCCGTTACGCTGC
TCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGC
GTGTCAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAACGGCATG
AAGCTGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGA
GGCTGTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGG
GCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAG
TTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCAAGGG
TCTCGACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAGGCTC
CCAAGGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTATCAACCCCTAC
ATGACCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGAC
CGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGC
GTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL17KJC3_010954Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010954-T1KJC3_010954-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010954-T1.exon1KJC3_010954-T1.exon1Aspergillus niger KJC3exon
KJC3_010954-T1.exon2KJC3_010954-T1.exon2Aspergillus niger KJC3exon
KJC3_010954-T1.exon3KJC3_010954-T1.exon3Aspergillus niger KJC3exon
KJC3_010954-T1.exon4KJC3_010954-T1.exon4Aspergillus niger KJC3exon
KJC3_010954-T1.exon5KJC3_010954-T1.exon5Aspergillus niger KJC3exon
KJC3_010954-T1.exon6KJC3_010954-T1.exon6Aspergillus niger KJC3exon
KJC3_010954-T1.exon7KJC3_010954-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010954-T1.cdsKJC3_010954-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR018260
DBxrefInterPro:IPR001063
DBxrefInterPro:IPR036394
DBxrefInterPro:IPR005721
DBxrefPFAM:PF00237
Product60S ribosomal protein L17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4782082..4784766 +
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