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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4814984..4817015- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010963-T1 ID=KJC3_010963-T1|Name=KJC3_010963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2032bp|location=Sequence derived from alignment at ch7:4814984..4817015- (Aspergillus niger KJC3)
GTGGAGTCGGGCCTCGGCTGTGTTGCTTCTCCGCATTCCACTTAAGTATC
AAAGTATCATCAACACGATTCTCTGCCTCTCCTTCTCTTCGCAAAACTCA
ATTCTCAATTAATACCCTTCAAAGCCAAGGAGTAACATGTCTGACTATCA
ATCTATTGCAGCTCGCAAGCAGCAGCATTTGGATTCACTCATTCCCCCAG
AATGGCGTCTCAACGCCTCGCAAATCCCCGCGGGGATGCTTTCCGTCGCC
GACTCTGTCACCAACCCTTCCTACAGCGAGAGCATCAATGTCGTTGACAT
TCCGCGAACTTGCGGTCTGCTCACTCCTCATGAACTGCACATCACAGAAG
ACTACGACATCCGCTCCCTCCTGAAAGAACTCCACTCCAAACGTCTCAGC
GCGGAAGAAGTCACCCGCGCGTTCTGCAAGGTATATCCCATTCCATACCG
GAATATCACATCACTAACCCTGCATCTTCTCAGCGCGCCGCAATTGCCCA
ACAACTCTCTCGCTGTCTCTCCGAGCCTCTCTTCACCCAAGCCCTCGCTC
GCGCCCGCAGCCTCGACGCCCACCTTCACACCACCAACACCCCCATCGGC
CCACTCCACGGCCTCCCCATCTCCGTCAAAGACACTTTCCAAATCACCGG
CGTCGACGCAACCAACGGTCTCGCCGCCCTCGCCTTCCACCCCTCCACCA
AGGACGCCGATCTAGTCACCCTCCTCCAATCCCTCGGCGCCATCATCATC
ACCAAGACCAACGTCCCTCAAACCGTCTCCACCCTCGACACCGCAAACCA
TCTCTTCGGCCGCACCCTGAACCCCCTCAACCGCCGCCTAACCGTTGGCG
GCAGTACCGGCGGCGAAGCTGCTCTCCTAGCCCTCCGCGGTACCACCCTC
AGCTTCGGCACTGACATCGGCGGCAGTGTGCGTATCCCGCCCATGTGCGT
GGGCAAATACGGCTTCAAGCCCAGCCAGGGCCGACTCCCATACGGCGGAC
AGCAAGAGAGCGGACATCTGCTGGCGAAGAACCGCATTGCATTGCAGCCC
GTGGCAGGAGTGATGGCCCACTCTGTGGAAGACATAGGGCTAGCTTTGGG
GGAGATTGTGCCTTGGGCAGAACTGTTCGGAGAGGACTGTATACCCGGCC
ACTGGGGACCGTCATCATCCCTAACACCTACAAAGCAGAAACTAACCATT
GGCATCCTCCGCACCGACGGCCTCGTCGAACCCCTCCCTCCTATCCGGAA
CATCCTCAACGAAGTCGCTACCATCCTCCACCACCATCACCATATCGAGC
TCATCGAACTCCCCACCCCACCCGCCCTCCGCAAATGCCAAACCATCGCC
AACAAGCTCATGGGGGTCGACGGCGGCAACCTCATGCACGACCTCCTCGA
ACAGACCAACGAGCCCCTGATCCCCTGGCTCCAGGGGCGCTCGAAGCGCC
GCAACCCACTCACGGTCCCAGAGCTATGCGAGCTCCAGCACCAACGAGCA
CAAGTCCAGCGCGAGATGATGAACATGTGGACGTATACCTCCCCCACGGA
TAAGGAAACCGGGAGTAAGAAGAGGATAGACGCAATCATCCACCCCGTCG
CACCGCACCCCGTCCCCGAACACGACAAGTATAACGCCGTCGGGTATACC
TCGTCCTGGGTGTTGTTGGATTATCCGGCGGGAGTTGTGCCGGTGCGGAA
GGTCACGATGGAGGATTTGGAGGTGGGGAGGGAGATGAAGGATCCGGTGA
GGGGGAGCTGGGATGGGAAGAATAGGGAGTTGTGTATGTTTCTCCTCTCT
CTCTATCCTCCTTTTATTATTGTGATAATTTCTGTTTGGATGCTGTGCTA
ACCAGTGGATGGGTGCAGGGGACGAGAAACTCGTCGATAGACACGTGTAC
CTTGATTCGCCGCTCAGCGTGCAGGTCATCACGCCTAGACTGCATGATTA
TGAATTGTATACGGCGATGGGGGTGATCGATCGGGCTGTGAAGGAGCATT
ACTCGAAGAGTAAGGATACTGCGAAGCTATAG back to topCoding sequence (CDS) from alignment at ch7:4814984..4817015- >KJC3_010963-T1 ID=KJC3_010963-T1|Name=KJC3_010963-T1|organism=Aspergillus niger KJC3|type=CDS|length=5274bp|location=Sequence derived from alignment at ch7:4814984..4817015- (Aspergillus niger KJC3)
GGGACGAGAAACTCGTCGATAGACACGTGTACCTTGATTCGCCGCTCAGC
GTGCAGGTCATCACGCCTAGACTGCATGATTATGAATTGTATACGGCGAT
GGGGGTGATCGATCGGGCTGTGAAGGAGCATTACTCGAAGAGTAAGGATA
CTGCGAAGCTATAGCGCGCCGCAATTGCCCAACAACTCTCTCGCTGTCTC
TCCGAGCCTCTCTTCACCCAAGCCCTCGCTCGCGCCCGCAGCCTCGACGC
CCACCTTCACACCACCAACACCCCCATCGGCCCACTCCACGGCCTCCCCA
TCTCCGTCAAAGACACTTTCCAAATCACCGGCGTCGACGCAACCAACGGT
CTCGCCGCCCTCGCCTTCCACCCCTCCACCAAGGACGCCGATCTAGTCAC
CCTCCTCCAATCCCTCGGCGCCATCATCATCACCAAGACCAACGTCCCTC
AAACCGTCTCCACCCTCGACACCGCAAACCATCTCTTCGGCCGCACCCTG
AACCCCCTCAACCGCCGCCTAACCGTTGGCGGCAGTACCGGCGGCGAAGC
TGCTCTCCTAGCCCTCCGCGGTACCACCCTCAGCTTCGGCACTGACATCG
GCGGCAGTGTGCGTATCCCGCCCATGTGCGTGGGCAAATACGGCTTCAAG
CCCAGCCAGGGCCGACTCCCATACGGCGGACAGCAAGAGAGCGGACATCT
GCTGGCGAAGAACCGCATTGCATTGCAGCCCGTGGCAGGAGTGATGGCCC
ACTCTGTGGAAGACATAGGGCTAGCTTTGGGGGAGATTGTGCCTTGGGCA
GAACTGTTCGGAGAGGACTGTATACCCGGCCACTGGGGACCGTCATCATC
CCTAACACCTACAAAGCAGAAACTAACCATTGGCATCCTCCGCACCGACG
GCCTCGTCGAACCCCTCCCTCCTATCCGGAACATCCTCAACGAAGTCGCT
ACCATCCTCCACCACCATCACCATATCGAGCTCATCGAACTCCCCACCCC
ACCCGCCCTCCGCAAATGCCAAACCATCGCCAACAAGCTCATGGGGGTCG
ACGGCGGCAACCTCATGCACGACCTCCTCGAACAGACCAACGAGCCCCTG
ATCCCCTGGCTCCAGGGGCGCTCGAAGCGCCGCAACCCACTCACGGTCCC
AGAGCTATGCGAGCTCCAGCACCAACGAGCACAAGTCCAGCGCGAGATGA
TGAACATGTGGACGTATACCTCCCCCACGGATAAGGAAACCGGGAGTAAG
AAGAGGATAGACGCAATCATCCACCCCGTCGCACCGCACCCCGTCCCCGA
ACACGACAAGTATAACGCCGTCGGGTATACCTCGTCCTGGGTGTTGTTGG
ATTATCCGGCGGGAGTTGTGCCGGTGCGGAAGGTCACGATGGAGGATTTG
GAGGTGGGGAGGGAGATGAAGGATCCGGTGAGGGGGAGCTGGGATGGGAA
GAATAGGGAGTTGTATGTCTGACTATCAATCTATTGCAGCTCGCAAGCAG
CAGCATTTGGATTCACTCATTCCCCCAGAATGGCGTCTCAACGCCTCGCA
AATCCCCGCGGGGATGCTTTCCGTCGCCGACTCTGTCACCAACCCTTCCT
ACAGCGAGAGCATCAATGTCGTTGACATTCCGCGAACTTGCGGTCTGCTC
ACTCCTCATGAACTGCACATCACAGAAGACTACGACATCCGCTCCCTCCT
GAAAGAACTCCACTCCAAACGTCTCAGCGCGGAAGAAGTCACCCGCGCGT
TCTGCAAGGGGACGAGAAACTCGTCGATAGACACGTGTACCTTGATTCGC
CGCTCAGCGTGCAGGTCATCACGCCTAGACTGCATGATTATGAATTGTAT
ACGGCGATGGGGGTGATCGATCGGGCTGTGAAGGAGCATTACTCGAAGAG
TAAGGATACTGCGAAGCTATAGCGCGCCGCAATTGCCCAACAACTCTCTC
GCTGTCTCTCCGAGCCTCTCTTCACCCAAGCCCTCGCTCGCGCCCGCAGC
CTCGACGCCCACCTTCACACCACCAACACCCCCATCGGCCCACTCCACGG
CCTCCCCATCTCCGTCAAAGACACTTTCCAAATCACCGGCGTCGACGCAA
CCAACGGTCTCGCCGCCCTCGCCTTCCACCCCTCCACCAAGGACGCCGAT
CTAGTCACCCTCCTCCAATCCCTCGGCGCCATCATCATCACCAAGACCAA
CGTCCCTCAAACCGTCTCCACCCTCGACACCGCAAACCATCTCTTCGGCC
GCACCCTGAACCCCCTCAACCGCCGCCTAACCGTTGGCGGCAGTACCGGC
GGCGAAGCTGCTCTCCTAGCCCTCCGCGGTACCACCCTCAGCTTCGGCAC
TGACATCGGCGGCAGTGTGCGTATCCCGCCCATGTGCGTGGGCAAATACG
GCTTCAAGCCCAGCCAGGGCCGACTCCCATACGGCGGACAGCAAGAGAGC
GGACATCTGCTGGCGAAGAACCGCATTGCATTGCAGCCCGTGGCAGGAGT
GATGGCCCACTCTGTGGAAGACATAGGGCTAGCTTTGGGGGAGATTGTGC
CTTGGGCAGAACTGTTCGGAGAGGACTGTATACCCGGCCACTGGGGACCG
TCATCATCCCTAACACCTACAAAGCAGAAACTAACCATTGGCATCCTCCG
CACCGACGGCCTCGTCGAACCCCTCCCTCCTATCCGGAACATCCTCAACG
AAGTCGCTACCATCCTCCACCACCATCACCATATCGAGCTCATCGAACTC
CCCACCCCACCCGCCCTCCGCAAATGCCAAACCATCGCCAACAAGCTCAT
GGGGGTCGACGGCGGCAACCTCATGCACGACCTCCTCGAACAGACCAACG
AGCCCCTGATCCCCTGGCTCCAGGGGCGCTCGAAGCGCCGCAACCCACTC
ACGGTCCCAGAGCTATGCGAGCTCCAGCACCAACGAGCACAAGTCCAGCG
CGAGATGATGAACATGTGGACGTATACCTCCCCCACGGATAAGGAAACCG
GGAGTAAGAAGAGGATAGACGCAATCATCCACCCCGTCGCACCGCACCCC
GTCCCCGAACACGACAAGTATAACGCCGTCGGGTATACCTCGTCCTGGGT
GTTGTTGGATTATCCGGCGGGAGTTGTGCCGGTGCGGAAGGTCACGATGG
AGGATTTGGAGGTGGGGAGGGAGATGAAGGATCCGGTGAGGGGGAGCTGG
GATGGGAAGAATAGGGAGTTGTATGTCTGACTATCAATCTATTGCAGCTC
GCAAGCAGCAGCATTTGGATTCACTCATTCCCCCAGAATGGCGTCTCAAC
GCCTCGCAAATCCCCGCGGGGATGCTTTCCGTCGCCGACTCTGTCACCAA
CCCTTCCTACAGCGAGAGCATCAATGTCGTTGACATTCCGCGAACTTGCG
GTCTGCTCACTCCTCATGAACTGCACATCACAGAAGACTACGACATCCGC
TCCCTCCTGAAAGAACTCCACTCCAAACGTCTCAGCGCGGAAGAAGTCAC
CCGCGCGTTCTGCAAGGGGACGAGAAACTCGTCGATAGACACGTGTACCT
TGATTCGCCGCTCAGCGTGCAGGTCATCACGCCTAGACTGCATGATTATG
AATTGTATACGGCGATGGGGGTGATCGATCGGGCTGTGAAGGAGCATTAC
TCGAAGAGTAAGGATACTGCGAAGCTATAGCGCGCCGCAATTGCCCAACA
ACTCTCTCGCTGTCTCTCCGAGCCTCTCTTCACCCAAGCCCTCGCTCGCG
CCCGCAGCCTCGACGCCCACCTTCACACCACCAACACCCCCATCGGCCCA
CTCCACGGCCTCCCCATCTCCGTCAAAGACACTTTCCAAATCACCGGCGT
CGACGCAACCAACGGTCTCGCCGCCCTCGCCTTCCACCCCTCCACCAAGG
ACGCCGATCTAGTCACCCTCCTCCAATCCCTCGGCGCCATCATCATCACC
AAGACCAACGTCCCTCAAACCGTCTCCACCCTCGACACCGCAAACCATCT
CTTCGGCCGCACCCTGAACCCCCTCAACCGCCGCCTAACCGTTGGCGGCA
GTACCGGCGGCGAAGCTGCTCTCCTAGCCCTCCGCGGTACCACCCTCAGC
TTCGGCACTGACATCGGCGGCAGTGTGCGTATCCCGCCCATGTGCGTGGG
CAAATACGGCTTCAAGCCCAGCCAGGGCCGACTCCCATACGGCGGACAGC
AAGAGAGCGGACATCTGCTGGCGAAGAACCGCATTGCATTGCAGCCCGTG
GCAGGAGTGATGGCCCACTCTGTGGAAGACATAGGGCTAGCTTTGGGGGA
GATTGTGCCTTGGGCAGAACTGTTCGGAGAGGACTGTATACCCGGCCACT
GGGGACCGTCATCATCCCTAACACCTACAAAGCAGAAACTAACCATTGGC
ATCCTCCGCACCGACGGCCTCGTCGAACCCCTCCCTCCTATCCGGAACAT
CCTCAACGAAGTCGCTACCATCCTCCACCACCATCACCATATCGAGCTCA
TCGAACTCCCCACCCCACCCGCCCTCCGCAAATGCCAAACCATCGCCAAC
AAGCTCATGGGGGTCGACGGCGGCAACCTCATGCACGACCTCCTCGAACA
GACCAACGAGCCCCTGATCCCCTGGCTCCAGGGGCGCTCGAAGCGCCGCA
ACCCACTCACGGTCCCAGAGCTATGCGAGCTCCAGCACCAACGAGCACAA
GTCCAGCGCGAGATGATGAACATGTGGACGTATACCTCCCCCACGGATAA
GGAAACCGGGAGTAAGAAGAGGATAGACGCAATCATCCACCCCGTCGCAC
CGCACCCCGTCCCCGAACACGACAAGTATAACGCCGTCGGGTATACCTCG
TCCTGGGTGTTGTTGGATTATCCGGCGGGAGTTGTGCCGGTGCGGAAGGT
CACGATGGAGGATTTGGAGGTGGGGAGGGAGATGAAGGATCCGGTGAGGG
GGAGCTGGGATGGGAAGAATAGGGAGTTGTATGTCTGACTATCAATCTAT
TGCAGCTCGCAAGCAGCAGCATTTGGATTCACTCATTCCCCCAGAATGGC
GTCTCAACGCCTCGCAAATCCCCGCGGGGATGCTTTCCGTCGCCGACTCT
GTCACCAACCCTTCCTACAGCGAGAGCATCAATGTCGTTGACATTCCGCG
AACTTGCGGTCTGCTCACTCCTCATGAACTGCACATCACAGAAGACTACG
ACATCCGCTCCCTCCTGAAAGAACTCCACTCCAAACGTCTCAGCGCGGAA
GAAGTCACCCGCGCGTTCTGCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010963-T1.utr5p1 | KJC3_010963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036928 |
| DBxref | InterPro:IPR023631 |
| DBxref | PFAM:PF01425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4814984..4817015 - |
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