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KJC3_010966-T1, KJC3_010966-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010966-T1
Unique NameKJC3_010966-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4824084..4825605+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010966-T1 ID=KJC3_010966-T1|Name=KJC3_010966-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1522bp|location=Sequence derived from alignment at ch7:4824084..4825605+ (Aspergillus niger KJC3)
TTACTCGTTATAGATGATTGTCTAGCTGCTCCTGGTTAGTCTGTAATTGA
GGGAAGTATGGATGATGGGGAGATGCTGATTGGTCAGTGCAGATACACTC
CATCCATACTACTATCACTAAGTACTGACTACCCAGATGGATGGAAGTGA
AGGCCGGCCTCCAGTCCTGTTACTCAGAGACTTCCCTCAGAGTCATACAC
TACGAAGTGCCCAGCGAAGATCTCCCAAATGGGGAGGATTCCTCTGTGAG
ATCATTCAATGAAGTCCACACTCTCTGCTCGCGACCAATGACGGGTTATC
GAAATTTGCTCAATCGTGCGCAGCAAGGTCCCCATCTGGACATCCCCCAC
CCCATGGATTGGTGGGAGAAGAGTACCTTGTAGGATGACAATGCCTCACG
ATGTCGTGATAGTTGAACTACCCCTCTTCTATCCTTATTTCTTGTTTCAT
CTATCTGCCTCCTTTTTTCTTTATCCAACATCACCACCATCTCAACCTAT
CCAACCAGCTACACACTACCACTCAAACCAAACCACCCAAAATGACTTCC
AAATGCACCCTCCCAGATCTACCCTACGACTACGATGTAAGTCACACCCC
CTTCCTTCCCACCCCCCATTAACCCCCATCTCATCAATAACAGGCCCTCG
AACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAAAAGCACCAC
CAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCAAGCCTCCGC
TCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGCAGAAACTCA
AGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGGAAGAACTTG
GCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGCCCCGAGCCT
CAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACTTCACGGATG
CGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGGGGCTGGCTG
GTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCACGAAGGATCA
GGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATATGTGGGAAC
ATGCTTATTATCTGCAGGTAAGTATCCCCTCCTTCCAGATTGCTTTGGTT
GAGTAATGCTAATGATGATGGTGGTGGTATAGTACTTGAACAACAAAGCC
TCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGAAGCGGAGCA
TCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGTTGTAGTTGG
TCTCGATCTATTGTACCTATCAACAGACTGTCGATAGTAGCCACATACAT
GATTGATTGATTGATTGATTCATTTAATCCTTCCTTTGTATTCCTGAATC
CATAAACACCAACCCTGAATACCATACAGCAAATGCTACGCATGTACAAT
AAAATTAAAGAGAGAGATCAATCATATCCCACCACCCCCCTCCCCATATC
CACAATCCCAGTCCCAGTCCCA
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Coding sequence (CDS) from alignment at ch7:4824084..4825605+

>KJC3_010966-T1 ID=KJC3_010966-T1|Name=KJC3_010966-T1|organism=Aspergillus niger KJC3|type=CDS|length=1899bp|location=Sequence derived from alignment at ch7:4824084..4825605+ (Aspergillus niger KJC3)
ATGACTTCCAAATGCACCCTCCCAGATCTACCCTACGACTACGATGCCCT
CGAACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAAAAGCACC
ACCAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCAAGCCTCC
GCTCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGCAGAAACT
CAAGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGGAAGAACT
TGGCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGCCCCGAGC
CTCAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACTTCACGGA
TGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGGGGCTGGC
TGGTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCACGAAGGAT
CAGGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATATGTGGGA
ACATGCTTATTATCTGCAGTACTTGAACAACAAAGCCTCCTACGTGCAGA
ACATCTGGAAGGTGATTAACTGGGAAGAAGCGGAGCATCGGTATCTGAAT
GGTACGGAGGAACTGGGTTCGTTGAAGTTGTAGATGACTTCCAAATGCAC
CCTCCCAGATCTACCCTACGACTACGATGCCCTCGAACCCATCATCTCCA
AACAAATCATGGAACTCCACCACAAAAAGCACCACCAGACCTATGTAAAC
AACCTAAACGCCGCCCTCGCTTCTCAAGCCTCCGCTCTCGACAGCAACGA
CATCACCCAGCTCATCAGCATCCAGCAGAAACTCAAGTTCAACGGCGGCG
GCCACATCAACCATTCTCTGTTTTGGAAGAACTTGGCTCGCTACGACTCC
CCGGCCACTAACCTGGAGAGATCCGCCCCGAGCCTCAAAGACGCCATCGA
GAAGCAGTGGGGATCAGTCAAAAACTTCACGGATGCGTTTGAGGCGGTGC
TGCTGGGCATCCAAGGCAGCGGATGGGGCTGGCTGGTGAGTTCGGGTAAG
ACGGGATTCCTTGAGATTGTCACCACGAAGGATCAGGATCCAGTGACGGG
ACCGATTCCGGTGTTCGGAGTGGATATGTGGGAACATGCTTATTATCTGC
AGTACTTGAACAACAAAGCCTCCTACGTGCAGAACATCTGGAAGGTGATT
AACTGGGAAGAAGCGGAGCATCGGTATCTGAATGGTACGGAGGAACTGGG
TTCGTTGAAGTTGTAGATGACTTCCAAATGCACCCTCCCAGATCTACCCT
ACGACTACGATGCCCTCGAACCCATCATCTCCAAACAAATCATGGAACTC
CACCACAAAAAGCACCACCAGACCTATGTAAACAACCTAAACGCCGCCCT
CGCTTCTCAAGCCTCCGCTCTCGACAGCAACGACATCACCCAGCTCATCA
GCATCCAGCAGAAACTCAAGTTCAACGGCGGCGGCCACATCAACCATTCT
CTGTTTTGGAAGAACTTGGCTCGCTACGACTCCCCGGCCACTAACCTGGA
GAGATCCGCCCCGAGCCTCAAAGACGCCATCGAGAAGCAGTGGGGATCAG
TCAAAAACTTCACGGATGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGC
AGCGGATGGGGCTGGCTGGTGAGTTCGGGTAAGACGGGATTCCTTGAGAT
TGTCACCACGAAGGATCAGGATCCAGTGACGGGACCGATTCCGGTGTTCG
GAGTGGATATGTGGGAACATGCTTATTATCTGCAGTACTTGAACAACAAA
GCCTCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGAAGCGGA
GCATCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004784superoxide dismutase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010966KJC3_010966Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010966-T1KJC3_010966-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010966-T1.utr5p1KJC3_010966-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010966-T1.utr5p2KJC3_010966-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010966-T1.exon1KJC3_010966-T1.exon1Aspergillus niger KJC3exon
KJC3_010966-T1.exon2KJC3_010966-T1.exon2Aspergillus niger KJC3exon
KJC3_010966-T1.exon3KJC3_010966-T1.exon3Aspergillus niger KJC3exon
KJC3_010966-T1.exon4KJC3_010966-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010966-T1.cdsKJC3_010966-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010966-T1.utr3p1KJC3_010966-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019833
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR019831
DBxrefInterPro:IPR036314
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR001189
DBxrefPFAM:PF00081
DBxrefPFAM:PF02777
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4824084..4825605 +
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