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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4868169..4869069+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010981-T1 ID=KJC3_010981-T1|Name=KJC3_010981-T1|organism=Aspergillus niger KJC3|type=mRNA|length=901bp|location=Sequence derived from alignment at ch7:4868169..4869069+ (Aspergillus niger KJC3)
GTTCATACTTTACAACATCCCCCACAATCCACTCCCATTGCCTATCAAGA
CCTCACCCAAACATCGGATCTACTTAACCAAGAAAACACATAAACAAGAT
AAACACCATGACCCCCAACCAAACACCAACTCCCAACCCCAAACGCCGCC
GTCTAAACACCACCATATCATCACCCTCATCCACACTCACCAAACCATTC
AAGTCGCCTCTCCGCAGACCAGCCCCAGCCACAGATACCACCACCACGAA
CACACCTTCTTCTATCTCTAAAGACTCACATCCACAACCACAACCACCAT
TCCACCCATCACCATCCACCCCCAAACCCTCCCCTAAAGATCCCCCAAAA
GGTACCCCCAAAATAGAAGACCCCACCCTCCAATCCCTCCAAACCACGCA
CCGACACCTCCAATCGCAACTCCTCTCTCTCCGCACAGAACTAGAATCAC
TCACGCAGGCTTCCCGCATCGAGGAATCTCACCGAGATGAAGAACTAGAG
AAATTGATCGTGAAGTGGAGGGGCGTGGGGCAGAGAGTTGCCGAGGAGGT
GTTTGAGGGGGCGAGAGAGAGGGTTAGTCGGATGGGGGGTGTGAGGGGCT
GGAGGGAGAGGGAGATGGAGAGGAGTAGGAGTGGTGGGTGGTGGGATGAT
AACGAGGGGAAGAATGGGGGTGGGGAGGGGGTTAAAGGCGATGAGGAGAA
GGTTTGTCTATTCTTTTTTTCTATTTTGATTGTGTTGTTTGTGCGTGGTT
GATGCGTTGTGGATGTATGCTGATTTAGTTGTGATAGGAGGTAGAGGCAG
AGGAAGAGGAAGAGGAATTCACGATAGGGATGATGTTGAAGACGATGGGG
ATTGATTTCAAGGTTATTGGGTATGATGGGGAGGGGCAGAGATGGGTGTG
A back to topCoding sequence (CDS) from alignment at ch7:4868169..4869069+ >KJC3_010981-T1 ID=KJC3_010981-T1|Name=KJC3_010981-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch7:4868169..4869069+ (Aspergillus niger KJC3)
ATGACCCCCAACCAAACACCAACTCCCAACCCCAAACGCCGCCGTCTAAA
CACCACCATATCATCACCCTCATCCACACTCACCAAACCATTCAAGTCGC
CTCTCCGCAGACCAGCCCCAGCCACAGATACCACCACCACGAACACACCT
TCTTCTATCTCTAAAGACTCACATCCACAACCACAACCACCATTCCACCC
ATCACCATCCACCCCCAAACCCTCCCCTAAAGATCCCCCAAAAGGTACCC
CCAAAATAGAAGACCCCACCCTCCAATCCCTCCAAACCACGCACCGACAC
CTCCAATCGCAACTCCTCTCTCTCCGCACAGAACTAGAATCACTCACGCA
GGCTTCCCGCATCGAGGAATCTCACCGAGATGAAGAACTAGAGAAATTGA
TCGTGAAGTGGAGGGGCGTGGGGCAGAGAGTTGCCGAGGAGGTGTTTGAG
GGGGCGAGAGAGAGGGTTAGTCGGATGGGGGGTGTGAGGGGCTGGAGGGA
GAGGGAGATGGAGAGGAGTAGGAGTGGTGGGTGGTGGGATGATAACGAGG
GGAAGAATGGGGGTGGGGAGGGGGTTAAAGGCGATGAGGAGAAGGAGGTA
GAGGCAGAGGAAGAGGAAGAGGAATTCACGATAGGGATGATGTTGAAGAC
GATGGGGATTGATTTCAAGGTTATTGGGTATGATGGGGAGGGGCAGAGAT
GGGTGTGAATGACCCCCAACCAAACACCAACTCCCAACCCCAAACGCCGC
CGTCTAAACACCACCATATCATCACCCTCATCCACACTCACCAAACCATT
CAAGTCGCCTCTCCGCAGACCAGCCCCAGCCACAGATACCACCACCACGA
ACACACCTTCTTCTATCTCTAAAGACTCACATCCACAACCACAACCACCA
TTCCACCCATCACCATCCACCCCCAAACCCTCCCCTAAAGATCCCCCAAA
AGGTACCCCCAAAATAGAAGACCCCACCCTCCAATCCCTCCAAACCACGC
ACCGACACCTCCAATCGCAACTCCTCTCTCTCCGCACAGAACTAGAATCA
CTCACGCAGGCTTCCCGCATCGAGGAATCTCACCGAGATGAAGAACTAGA
GAAATTGATCGTGAAGTGGAGGGGCGTGGGGCAGAGAGTTGCCGAGGAGG
TGTTTGAGGGGGCGAGAGAGAGGGTTAGTCGGATGGGGGGTGTGAGGGGC
TGGAGGGAGAGGGAGATGGAGAGGAGTAGGAGTGGTGGGTGGTGGGATGA
TAACGAGGGGAAGAATGGGGGTGGGGAGGGGGTTAAAGGCGATGAGGAGA
AGGAGGTAGAGGCAGAGGAAGAGGAAGAGGAATTCACGATAGGGATGATG
TTGAAGACGATGGGGATTGATTTCAAGGTTATTGGGTATGATGGGGAGGG
GCAGAGATGGGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010981-T1.utr5p1 | KJC3_010981-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018468 |
| DBxref | PFAM:PF10376 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4868169..4869069 + |
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