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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4869216..4871971- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010982-T1 ID=KJC3_010982-T1|Name=KJC3_010982-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2756bp|location=Sequence derived from alignment at ch7:4869216..4871971- (Aspergillus niger KJC3)
GACGTGGGGTCGCTGCGATCAGCATCAGTATGTGAGAGAAGTGAGTGTTA
CTACTGATTTATCTACATTTTCAGCATCTTTGTCCTTTGGTTATACTACT
TTCTTGATCCTCTGGGCCCGTCTTTACTGTCGGACCCTAATGGCGCGGCT
ATCGTCCTCCACTACCGCCAGGAATAGTAACGCTTCGTCGCCCTTTACGC
CGTTCCACGCTGACCCACCGCGTTGGACCGGGTCGTCCAGGACTCCTAAT
CCGATGAATCCCTCCTCCTCCACCCCTCAGAGACCGCCGACCACATTCCT
CATGCCCCCTAGTCTCAGTGGTGGTCGCCGTAGCAGCGCGGATTACCGCC
CGAGCATCCGCAAGGCGCAAGGCCATGTGCCAGCCTGCCTGGTCAATGCT
TCGGTGACGTATTGCAATAATGACCAGATCTACGCTTTCGGCGGCTTCGA
TCAGTACACGGATGAAGGTGATATGCTTAGTTCTCATGCTGTTCATCGTC
TATGTCTGATACTAATGCTTTCTACTCGTTGAAATAGTTTACAACCACGT
CTTGCGTTTGAATCTCAACACTCTTCGGTGGGAACTAGTCGATAACTATG
GAGACATTCCCGGTGTCCGCATGGGTTAGCTTCCCCGCATTTTTTGAATA
CTTTTCTCGATAAGAAATACGCAAACCATACTAATTTATCCTCTCGATTG
TCGTAGGTCATACGGCTACCCTCTACCAAGGTGATAAGTTGATTGTATTT
GGTGGAGAAAATGAACACCGCGACCATCTATCTGACGTTGTCATCCTGGA
CATCTCGACCTCTACCTGGACTCAGCCGGAAATCCATGGACCGATTCCCC
GAGGAAGGGCTCGTCATGCCGCCGTCATCCACGATGAGAAGCTTTTCATC
ATGGGAGGAGTAACTGGAGAGAACAATGTGATCCTCGACGATTTGTCGTA
TCTGGACCTCAAAACCTGGACCTGGTCTCGCTCTTGGAGATTCACGGCTC
GTTTCGACCACATCGCCTGGGTTTGGGGCGGCCGCCTCTGGATCTTTGGA
GGCCTCGATCCCGACATGGAGCGTACAACGGATATTTGGTGGCTGGATCT
CAAAGGCATTCCGTCTCTTGGAGCGGCGACTTCGCAAGGTACCGTGGATT
CCCCAGCGCCAATCAGCAGGATTACTTATAGTCCAGACGCTATCTTTAGT
AGTCCCCCGCAGCAGCTCTCGGGCCGGTCCAGTAGCTATGCTGCGAATTC
CGGGAGTGTTCAAATTCGCAATGGCAATCGTCGGAAGCCGATCGCTCCGG
GCGCCATTTCCTGTCTTCGGTTCAAGTCTGGCCCTCACGTGCCTGCACTG
TTCTCTGGCACTCATTTCCAGGCTTATGCATCCGGAGTGCTCCTGGATCT
GATTACTCCTTCCGAGACAGTGCGTACCTATGAGTGCAATCTATCATCAC
TGGATCTGGACTCTTTGCGCTGGCAGCGGCTAGCTGACGGGCAAGAAATC
TTCAAACCCGGCTTTCGATGGCATTATTGCACCGTGAATGCCAGCGGCAC
CAAAGCGTGGCTTCTTGGTAGTAGCCTCGACACCGGTGCTACCCCGGGAA
CTAGTGATGAGAATCATATGAGCGAGGTGCTTTGCATTGACCTTGAAAAA
TACGGCTTACTGGGAAACGAGTTGTCCGCGTTTTCGCCCAGTCAAAGCCG
GACGTCGTTACCCGAACCAACAGGGATGGGATCTTTGTCCGGTTTGGGAG
CAGACCTTTCGGCAGCGTTCGATCAACCACCGGAGTCTGGTAGCGGTGCA
GACTTTATAATTACCGCTAATCCAGATGATCAGGTTGACACGGACGAGGA
GCCGGACACCCCCACTTCCCGATCAGAGCCAGCCTTCCTCTCCCCCAACA
CACCTACTTCGCCTCCGATTCATGTGCACCGGATCATTCTGCAGCTGCGA
TGGCCCCACTTCAAGAGGCTCTATTCGGCTCAGATGGCTGAATATCATGC
AAACAGGATGCACATTCCCGAGCCATACTCGGTAGTGCGTGCGTTCATCT
ACTATCTGTATACAGATAGCATCGCCGGCCACCTGGAATTTTGTTCCGAT
ATCATCGACGTTGCGGGAATGCTCGTCATGGCGAATCTTTACGACATGCC
CAAGTTGCGTCTACTTTGTGTCAACCGCCTTAGCCGCGAACTGGATGTAG
AGAACGCCGCAATCATTTGGGAACGTGCAGGGCGCACCAACGAACAGTGG
CTGATGCGTCGTGCCGCTCAGTTCTGTCTTGCCAATTGGGGACGTGTTGT
CCGGACCGATGGCTTCAAGTCTCTAAGCCGGCAGAGTTTGATCGAGCTGT
GCGAGGTAGTCGACACTGAGGGTCGTATTATCGCCGGGCCTGAGCTGGAG
ATGGTTGGGGCCTTTGGAGAAGGATATGGATCTAATAAGGATCCCAAGCC
TTCTCAGATAGCACTAAGCGGTGCTATGGCTGACAATATGGAGGATATTG
ATGGTGATGATATTGATGGCATGGACATCATCTGATGTTGAGGAAGAGTG
TCTGGGTAGAGCTTCCTTTCTTTTCTTTGTTTATTTTGTGTTCTGGATTC
TTTTTTTTTTTTACAGAGCATCTATGATATGGGATGGCGTGAAACAGGCT
GAGAGCATATATGTATGGGTCAAAATGGGGTTATGAGATAGGAGTTTTGC
AAATTGCGGTCACGATAGGGAGTATTTGCAGTATAGCGTTAGCATAGAAT
GATCAC back to topCoding sequence (CDS) from alignment at ch7:4869216..4871971- >KJC3_010982-T1 ID=KJC3_010982-T1|Name=KJC3_010982-T1|organism=Aspergillus niger KJC3|type=CDS|length=6732bp|location=Sequence derived from alignment at ch7:4869216..4871971- (Aspergillus niger KJC3)
GTCATACGGCTACCCTCTACCAAGGTGATAAGTTGATTGTATTTGGTGGA
GAAAATGAACACCGCGACCATCTATCTGACGTTGTCATCCTGGACATCTC
GACCTCTACCTGGACTCAGCCGGAAATCCATGGACCGATTCCCCGAGGAA
GGGCTCGTCATGCCGCCGTCATCCACGATGAGAAGCTTTTCATCATGGGA
GGAGTAACTGGAGAGAACAATGTGATCCTCGACGATTTGTCGTATCTGGA
CCTCAAAACCTGGACCTGGTCTCGCTCTTGGAGATTCACGGCTCGTTTCG
ACCACATCGCCTGGGTTTGGGGCGGCCGCCTCTGGATCTTTGGAGGCCTC
GATCCCGACATGGAGCGTACAACGGATATTTGGTGGCTGGATCTCAAAGG
CATTCCGTCTCTTGGAGCGGCGACTTCGCAAGGTACCGTGGATTCCCCAG
CGCCAATCAGCAGGATTACTTATAGTCCAGACGCTATCTTTAGTAGTCCC
CCGCAGCAGCTCTCGGGCCGGTCCAGTAGCTATGCTGCGAATTCCGGGAG
TGTTCAAATTCGCAATGGCAATCGTCGGAAGCCGATCGCTCCGGGCGCCA
TTTCCTGTCTTCGGTTCAAGTCTGGCCCTCACGTGCCTGCACTGTTCTCT
GGCACTCATTTCCAGGCTTATGCATCCGGAGTGCTCCTGGATCTGATTAC
TCCTTCCGAGACAGTGCGTACCTATGAGTGCAATCTATCATCACTGGATC
TGGACTCTTTGCGCTGGCAGCGGCTAGCTGACGGGCAAGAAATCTTCAAA
CCCGGCTTTCGATGGCATTATTGCACCGTGAATGCCAGCGGCACCAAAGC
GTGGCTTCTTGGTAGTAGCCTCGACACCGGTGCTACCCCGGGAACTAGTG
ATGAGAATCATATGAGCGAGGTGCTTTGCATTGACCTTGAAAAATACGGC
TTACTGGGAAACGAGTTGTCCGCGTTTTCGCCCAGTCAAAGCCGGACGTC
GTTACCCGAACCAACAGGGATGGGATCTTTGTCCGGTTTGGGAGCAGACC
TTTCGGCAGCGTTCGATCAACCACCGGAGTCTGGTAGCGGTGCAGACTTT
ATAATTACCGCTAATCCAGATGATCAGGTTGACACGGACGAGGAGCCGGA
CACCCCCACTTCCCGATCAGAGCCAGCCTTCCTCTCCCCCAACACACCTA
CTTCGCCTCCGATTCATGTGCACCGGATCATTCTGCAGCTGCGATGGCCC
CACTTCAAGAGGCTCTATTCGGCTCAGATGGCTGAATATCATGCAAACAG
GATGCACATTCCCGAGCCATACTCGGTAGTGCGTGCGTTCATCTACTATC
TGTATACAGATAGCATCGCCGGCCACCTGGAATTTTGTTCCGATATCATC
GACGTTGCGGGAATGCTCGTCATGGCGAATCTTTACGACATGCCCAAGTT
GCGTCTACTTTGTGTCAACCGCCTTAGCCGCGAACTGGATGTAGAGAACG
CCGCAATCATTTGGGAACGTGCAGGGCGCACCAACGAACAGTGGCTGATG
CGTCGTGCCGCTCAGTTCTGTCTTGCCAATTGGGGACGTGTTGTCCGGAC
CGATGGCTTCAAGTCTCTAAGCCGGCAGAGTTTGATCGAGCTGTGCGAGG
TAGTCGACACTGAGGGTCGTATTATCGCCGGGCCTGAGCTGGAGATGGTT
GGGGCCTTTGGAGAAGGATATGGATCTAATAAGGATCCCAAGCCTTCTCA
GATAGCACTAAGCGGTGCTATGGCTGACAATATGGAGGATATTGATGGTG
ATGATATTGATGGCATGGACATCATCTGATTTACAACCACGTCTTGCGTT
TGAATCTCAACACTCTTCGGTGGGAACTAGTCGATAACTATGGAGACATT
CCCGGTGTCCGCATGGATGGCGCGGCTATCGTCCTCCACTACCGCCAGGA
ATAGTAACGCTTCGTCGCCCTTTACGCCGTTCCACGCTGACCCACCGCGT
TGGACCGGGTCGTCCAGGACTCCTAATCCGATGAATCCCTCCTCCTCCAC
CCCTCAGAGACCGCCGACCACATTCCTCATGCCCCCTAGTCTCAGTGGTG
GTCGCCGTAGCAGCGCGGATTACCGCCCGAGCATCCGCAAGGCGCAAGGC
CATGTGCCAGCCTGCCTGGTCAATGCTTCGGTGACGTATTGCAATAATGA
CCAGATCTACGCTTTCGGCGGCTTCGATCAGTACACGGATGAAGGTCATA
CGGCTACCCTCTACCAAGGTGATAAGTTGATTGTATTTGGTGGAGAAAAT
GAACACCGCGACCATCTATCTGACGTTGTCATCCTGGACATCTCGACCTC
TACCTGGACTCAGCCGGAAATCCATGGACCGATTCCCCGAGGAAGGGCTC
GTCATGCCGCCGTCATCCACGATGAGAAGCTTTTCATCATGGGAGGAGTA
ACTGGAGAGAACAATGTGATCCTCGACGATTTGTCGTATCTGGACCTCAA
AACCTGGACCTGGTCTCGCTCTTGGAGATTCACGGCTCGTTTCGACCACA
TCGCCTGGGTTTGGGGCGGCCGCCTCTGGATCTTTGGAGGCCTCGATCCC
GACATGGAGCGTACAACGGATATTTGGTGGCTGGATCTCAAAGGCATTCC
GTCTCTTGGAGCGGCGACTTCGCAAGGTACCGTGGATTCCCCAGCGCCAA
TCAGCAGGATTACTTATAGTCCAGACGCTATCTTTAGTAGTCCCCCGCAG
CAGCTCTCGGGCCGGTCCAGTAGCTATGCTGCGAATTCCGGGAGTGTTCA
AATTCGCAATGGCAATCGTCGGAAGCCGATCGCTCCGGGCGCCATTTCCT
GTCTTCGGTTCAAGTCTGGCCCTCACGTGCCTGCACTGTTCTCTGGCACT
CATTTCCAGGCTTATGCATCCGGAGTGCTCCTGGATCTGATTACTCCTTC
CGAGACAGTGCGTACCTATGAGTGCAATCTATCATCACTGGATCTGGACT
CTTTGCGCTGGCAGCGGCTAGCTGACGGGCAAGAAATCTTCAAACCCGGC
TTTCGATGGCATTATTGCACCGTGAATGCCAGCGGCACCAAAGCGTGGCT
TCTTGGTAGTAGCCTCGACACCGGTGCTACCCCGGGAACTAGTGATGAGA
ATCATATGAGCGAGGTGCTTTGCATTGACCTTGAAAAATACGGCTTACTG
GGAAACGAGTTGTCCGCGTTTTCGCCCAGTCAAAGCCGGACGTCGTTACC
CGAACCAACAGGGATGGGATCTTTGTCCGGTTTGGGAGCAGACCTTTCGG
CAGCGTTCGATCAACCACCGGAGTCTGGTAGCGGTGCAGACTTTATAATT
ACCGCTAATCCAGATGATCAGGTTGACACGGACGAGGAGCCGGACACCCC
CACTTCCCGATCAGAGCCAGCCTTCCTCTCCCCCAACACACCTACTTCGC
CTCCGATTCATGTGCACCGGATCATTCTGCAGCTGCGATGGCCCCACTTC
AAGAGGCTCTATTCGGCTCAGATGGCTGAATATCATGCAAACAGGATGCA
CATTCCCGAGCCATACTCGGTAGTGCGTGCGTTCATCTACTATCTGTATA
CAGATAGCATCGCCGGCCACCTGGAATTTTGTTCCGATATCATCGACGTT
GCGGGAATGCTCGTCATGGCGAATCTTTACGACATGCCCAAGTTGCGTCT
ACTTTGTGTCAACCGCCTTAGCCGCGAACTGGATGTAGAGAACGCCGCAA
TCATTTGGGAACGTGCAGGGCGCACCAACGAACAGTGGCTGATGCGTCGT
GCCGCTCAGTTCTGTCTTGCCAATTGGGGACGTGTTGTCCGGACCGATGG
CTTCAAGTCTCTAAGCCGGCAGAGTTTGATCGAGCTGTGCGAGGTAGTCG
ACACTGAGGGTCGTATTATCGCCGGGCCTGAGCTGGAGATGGTTGGGGCC
TTTGGAGAAGGATATGGATCTAATAAGGATCCCAAGCCTTCTCAGATAGC
ACTAAGCGGTGCTATGGCTGACAATATGGAGGATATTGATGGTGATGATA
TTGATGGCATGGACATCATCTGATTTACAACCACGTCTTGCGTTTGAATC
TCAACACTCTTCGGTGGGAACTAGTCGATAACTATGGAGACATTCCCGGT
GTCCGCATGGATGGCGCGGCTATCGTCCTCCACTACCGCCAGGAATAGTA
ACGCTTCGTCGCCCTTTACGCCGTTCCACGCTGACCCACCGCGTTGGACC
GGGTCGTCCAGGACTCCTAATCCGATGAATCCCTCCTCCTCCACCCCTCA
GAGACCGCCGACCACATTCCTCATGCCCCCTAGTCTCAGTGGTGGTCGCC
GTAGCAGCGCGGATTACCGCCCGAGCATCCGCAAGGCGCAAGGCCATGTG
CCAGCCTGCCTGGTCAATGCTTCGGTGACGTATTGCAATAATGACCAGAT
CTACGCTTTCGGCGGCTTCGATCAGTACACGGATGAAGGTCATACGGCTA
CCCTCTACCAAGGTGATAAGTTGATTGTATTTGGTGGAGAAAATGAACAC
CGCGACCATCTATCTGACGTTGTCATCCTGGACATCTCGACCTCTACCTG
GACTCAGCCGGAAATCCATGGACCGATTCCCCGAGGAAGGGCTCGTCATG
CCGCCGTCATCCACGATGAGAAGCTTTTCATCATGGGAGGAGTAACTGGA
GAGAACAATGTGATCCTCGACGATTTGTCGTATCTGGACCTCAAAACCTG
GACCTGGTCTCGCTCTTGGAGATTCACGGCTCGTTTCGACCACATCGCCT
GGGTTTGGGGCGGCCGCCTCTGGATCTTTGGAGGCCTCGATCCCGACATG
GAGCGTACAACGGATATTTGGTGGCTGGATCTCAAAGGCATTCCGTCTCT
TGGAGCGGCGACTTCGCAAGGTACCGTGGATTCCCCAGCGCCAATCAGCA
GGATTACTTATAGTCCAGACGCTATCTTTAGTAGTCCCCCGCAGCAGCTC
TCGGGCCGGTCCAGTAGCTATGCTGCGAATTCCGGGAGTGTTCAAATTCG
CAATGGCAATCGTCGGAAGCCGATCGCTCCGGGCGCCATTTCCTGTCTTC
GGTTCAAGTCTGGCCCTCACGTGCCTGCACTGTTCTCTGGCACTCATTTC
CAGGCTTATGCATCCGGAGTGCTCCTGGATCTGATTACTCCTTCCGAGAC
AGTGCGTACCTATGAGTGCAATCTATCATCACTGGATCTGGACTCTTTGC
GCTGGCAGCGGCTAGCTGACGGGCAAGAAATCTTCAAACCCGGCTTTCGA
TGGCATTATTGCACCGTGAATGCCAGCGGCACCAAAGCGTGGCTTCTTGG
TAGTAGCCTCGACACCGGTGCTACCCCGGGAACTAGTGATGAGAATCATA
TGAGCGAGGTGCTTTGCATTGACCTTGAAAAATACGGCTTACTGGGAAAC
GAGTTGTCCGCGTTTTCGCCCAGTCAAAGCCGGACGTCGTTACCCGAACC
AACAGGGATGGGATCTTTGTCCGGTTTGGGAGCAGACCTTTCGGCAGCGT
TCGATCAACCACCGGAGTCTGGTAGCGGTGCAGACTTTATAATTACCGCT
AATCCAGATGATCAGGTTGACACGGACGAGGAGCCGGACACCCCCACTTC
CCGATCAGAGCCAGCCTTCCTCTCCCCCAACACACCTACTTCGCCTCCGA
TTCATGTGCACCGGATCATTCTGCAGCTGCGATGGCCCCACTTCAAGAGG
CTCTATTCGGCTCAGATGGCTGAATATCATGCAAACAGGATGCACATTCC
CGAGCCATACTCGGTAGTGCGTGCGTTCATCTACTATCTGTATACAGATA
GCATCGCCGGCCACCTGGAATTTTGTTCCGATATCATCGACGTTGCGGGA
ATGCTCGTCATGGCGAATCTTTACGACATGCCCAAGTTGCGTCTACTTTG
TGTCAACCGCCTTAGCCGCGAACTGGATGTAGAGAACGCCGCAATCATTT
GGGAACGTGCAGGGCGCACCAACGAACAGTGGCTGATGCGTCGTGCCGCT
CAGTTCTGTCTTGCCAATTGGGGACGTGTTGTCCGGACCGATGGCTTCAA
GTCTCTAAGCCGGCAGAGTTTGATCGAGCTGTGCGAGGTAGTCGACACTG
AGGGTCGTATTATCGCCGGGCCTGAGCTGGAGATGGTTGGGGCCTTTGGA
GAAGGATATGGATCTAATAAGGATCCCAAGCCTTCTCAGATAGCACTAAG
CGGTGCTATGGCTGACAATATGGAGGATATTGATGGTGATGATATTGATG
GCATGGACATCATCTGATTTACAACCACGTCTTGCGTTTGAATCTCAACA
CTCTTCGGTGGGAACTAGTCGATAACTATGGAGACATTCCCGGTGTCCGC
ATGGATGGCGCGGCTATCGTCCTCCACTACCGCCAGGAATAGTAACGCTT
CGTCGCCCTTTACGCCGTTCCACGCTGACCCACCGCGTTGGACCGGGTCG
TCCAGGACTCCTAATCCGATGAATCCCTCCTCCTCCACCCCTCAGAGACC
GCCGACCACATTCCTCATGCCCCCTAGTCTCAGTGGTGGTCGCCGTAGCA
GCGCGGATTACCGCCCGAGCATCCGCAAGGCGCAAGGCCATGTGCCAGCC
TGCCTGGTCAATGCTTCGGTGACGTATTGCAATAATGACCAGATCTACGC
TTTCGGCGGCTTCGATCAGTACACGGATGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010982-T1.utr3p1 | KJC3_010982-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010982-T1.utr5p1 | KJC3_010982-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011333 |
| DBxref | InterPro:IPR015915 |
| DBxref | InterPro:IPR000210 |
| DBxref | PFAM:PF13854 |
| DBxref | PFAM:PF13418 |
| DBxref | PFAM:PF13415 |
| DBxref | PFAM:PF07646 |
| DBxref | PFAM:PF01344 |
| DBxref | PFAM:PF00651 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch7 | supercontig | ch7:4869216..4871971 - |
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