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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4881712..4885328- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010986-T1 ID=KJC3_010986-T1|Name=KJC3_010986-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3617bp|location=Sequence derived from alignment at ch7:4881712..4885328- (Aspergillus niger KJC3)
TCCGGTCGTTGCTGCTTGCCGCCAGTTGCTGGGCTTCCTGACTTCGCTGC
TGTCGGTGAAATTGGGTGTTGTTCCTCGTGTGTGTGTGCGTGTTGCCCAC
ACCCTCCCCCATTAACCATCGCCCATCTTCATCATACTCTTTTACACCAT
CATCAACTTCTCATCATCGCCATCTACTACTGTTGTGACTACCTTCTTTC
TCTGCATCTTTGAATTTGTTTTCTTGCCTTTCGTGACTGCATCGACGAAG
TATTATCGTTACGTCCCGCCACCTTTCCCGAATCCGTCACAGTTCCGCAG
CCAAAGCGGGACAACATCCGAGGGTGGTGGACACTCCTTGTGTGATCCCG
CCCAAAACCGCCGTCGTGGAATCGTTCCTTAATGCTCGGGTCGTCAGAAG
CGACGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATCGGG
GACCTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCCCCT
CGGGTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGGATT
CCTCGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCACCG
TACTTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGACTT
CCCTCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTGCAG
CCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCCGGA
CAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGGAGA
ACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCTTCA
AGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAATGG
GGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAAAGG
CCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGGGTG
GTGTGTCTGTTGGCAGTTGGATTCGCGATGAGTGAGTGTCCTTTGTCCTT
ATGGGAATCATTTCGGTTTCCCCTGATCGCGCAAGTGCTTTGGCCACTGG
AAGCTGACGATGAATCATCTAGCATAATCATGACCGGCACATCTCCGTTC
ACTTTCCAGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGA
GGCAAACTTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGC
TTCACGATCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCT
CAGCAGGGCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGC
GGTGGCGATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCC
GTGGATTGCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAG
GTCCCTCACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGA
ACTCGATGAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCG
CGCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAA
AGGGTTCCGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAA
AGGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGC
AGAACAACCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAAC
CCTCTACAGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGG
GACGCCGGCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGG
CTATGCAAAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCT
GGGAACAACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACG
GTTGTTTAGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGC
TAAGTGGAGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGA
GAGCAACAGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAA
CGAGGAACCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGT
ATAAGAACCAGAATGGTCTGAAATACCACAAAGCTGTAAGTCTTTCGAAC
CAAACCACTTAGCTTTTCTAACTGTTTCCTAGCACGGCCACAATAACCAG
CAGCTTCATGACAACGCAGACGGCACCTTTTCCATCGTCAATCCCGAGAC
CTCAACTCCATATCCTGGAACACTTGGTATGGAGAAGGAGAAGCCCTACC
GCTGCGAGGTCTGTGGCAAGCGTTATAAGAACCTGAATGGTCTTAAATAT
CACAAGTCGCACTCGCCGCCATGCAATCCTGACTTCCAGCTTGCTGCAGG
CAGGAACTTGGCTTTTGGTGGAGGCGTCATGCAAGGGCAGAACATCAACG
TTGCTGGGGCTGGCCTACCTGGCATCGGTGAAGAGGGTCTTTTATAAGGT
CCCCATATCACGAACGACATGCAATTCAATTTTACGCATCATTATTCCCA
CACTAATTCGACGACGATTTTTGACGGCTTCGTCGCGCGGAATACGATTT
AATGATAGGTTTGGTGGCTTGGAGTTAATGGTATGAACGTCATGTCAATC
GCGGTTTGGGACGACCGTGCTTTGGTCTGGTAATAAATCAGTCCTTTCAA
GACTTTGAAGAAGATCTTCCACGACTCATTAGCCGATAGACGTATCGGCG
GTGGATTCTCTGGTTTCTTTTGCTTGCCCCTGGCATTTGCTTAGCTTTCA
CGGTCATGTGTATTCGGGATCAAAACAGAGAGTTGGGGGTTGCTTATGTC
GTCTTCCATTGTCACGTCTCCATTGCTAGGCTCCTTCGCGATCCACGATA
CCGAGTCATCTAATCAGAACTTTCTCAAAGGCTTGTCATGCCCTGCAGAA
ACAGAATCTGGAGTACGGTTGCGATGGGATGATAGGACGACTTTGGATTT
GAAAAAAAGAACGAAAAGCAATTTTTTAGCGCAAGGGTTTCTACTGGATA
TGCAAAGTTGGAGCAACGCGGTGGTTGTTGTTCTTTGCCTTTCTCTGGCA
CAATGAGGTTTCGCAGCTTGGAGACAAGGAAAGACCAGGAAAAAAAAGTA
ACTACTGGTGGTACTCTGGCGTCACTTAGTTCTGTAGATAATGTTTTCTC
CTTTTTCAGACCGGCTTCTGGTTCTTACACTGCGTGTCTTGTGTCATTTT
CTTCCCTTTCCTTTTCTTTGCTATCATTACTTCCTTCGTTTTTGCGTCTC
TTGTTCTTATTTGCCTGTGGTGTGTTGTTGGTGTTGTTGGAGAAACATGG
GACTTTCGAACTGACTGGCTGAGTTGCTGATAGAGCTTTTTACTCGCTAT
GTTCTTGTTGCTTGTTTTGCCTGCCTGCTCTTTTGAGATTCCCGTTTCGA
TTGAAGGTTTGATTTAATGTTGTTTGCTTGCGGAAAAAGGGCTCCTTTCT
TCATACCAAAAAAGTCTGAACATGAACCAATTTCACTCCATATCAATCAT
TAGCTCTCGGATATGCT back to topCoding sequence (CDS) from alignment at ch7:4881712..4885328- >KJC3_010986-T1 ID=KJC3_010986-T1|Name=KJC3_010986-T1|organism=Aspergillus niger KJC3|type=CDS|length=6084bp|location=Sequence derived from alignment at ch7:4881712..4885328- (Aspergillus niger KJC3)
CACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTTC
CATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATGG
AGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAAC
CTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTGA
CTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATGC
AAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGAA
GAGGGTCTTTTATAACATAATCATGACCGGCACATCTCCGTTCACTTTCC
AGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGAGGCAAAC
TTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGCTTCACGA
TCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCTCAGCAGG
GCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCGGTGGCG
ATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCCGTGGATT
GCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGGTCCCTC
ACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGAACTCGAT
GAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCGCGCCTCA
GTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAAGGGTTC
CGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAAAGGCTCT
CAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCAGAACAA
CCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAACCCTCTAC
AGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGGGACGCCG
GCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGGCTATGCA
AAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTGGGAACA
ACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACGGTTGTTT
AGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGCTAAGTGG
AGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGAGAGCAAC
AGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAACGAGGAA
CCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTATAAGAA
CCAGAATGGTCTGAAATACCACAAAGCTATGCTCGGGTCGTCAGAAGCGA
CGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATCGGGGAC
CTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCCCCTCGG
GTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGGATTCCT
CGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCACCGTAC
TTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGACTTCCC
TCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTGCAGCCG
CTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCCGGACAG
CAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGGAGAACG
GACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCTTCAAGG
CCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAATGGGGC
AACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAAAGGCCG
CCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGGGTGGTG
TGTCTGTTGGCAGTTGGATTCGCGATGACACGGCCACAATAACCAGCAGC
TTCATGACAACGCAGACGGCACCTTTTCCATCGTCAATCCCGAGACCTCA
ACTCCATATCCTGGAACACTTGGTATGGAGAAGGAGAAGCCCTACCGCTG
CGAGGTCTGTGGCAAGCGTTATAAGAACCTGAATGGTCTTAAATATCACA
AGTCGCACTCGCCGCCATGCAATCCTGACTTCCAGCTTGCTGCAGGCAGG
AACTTGGCTTTTGGTGGAGGCGTCATGCAAGGGCAGAACATCAACGTTGC
TGGGGCTGGCCTACCTGGCATCGGTGAAGAGGGTCTTTTATAACATAATC
ATGACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATC
CTCATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTT
GTGGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAA
GCTCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGA
CAGTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTC
AGCAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGAC
TTGCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATAT
GGATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATG
CCGCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGA
GGTTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCT
TCCAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTT
CTGGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAAT
ACTCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCAC
ACCAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGC
TTGGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAG
TCTCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTG
TATCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACA
CTCCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGT
GAGATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGA
TACCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAG
TCATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCAC
AAAGCTATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTC
TCTTCATTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGG
ACTCGACCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGA
CCGGATAGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGA
CATCGGCGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACT
CTCACTCTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATA
CAAACCAACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCG
CCAGAGTTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTG
CTCTGCAGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCA
AATGGTGTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTC
TATCGGTGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAA
TGTCCGGCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGT
TTAGTTGGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCG
CGATGACACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCAC
CTTTTCCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTG
GTATGGAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTAT
AAGAACCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAA
TCCTGACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCG
TCATGCAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATC
GGTGAAGAGGGTCTTTTATAACATAATCATGACCGGCACATCTCCGTTCA
CTTTCCAGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGAG
GCAAACTTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGCT
TCACGATCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCTC
AGCAGGGCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCG
GTGGCGATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCCG
TGGATTGCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGG
TCCCTCACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGAA
CTCGATGAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCGC
GCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAA
GGGTTCCGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAAA
GGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCA
GAACAACCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAACC
CTCTACAGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGGG
ACGCCGGCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGGC
TATGCAAAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTG
GGAACAACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACGG
TTGTTTAGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGCT
AAGTGGAGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGAG
AGCAACAGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAAC
GAGGAACCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTA
TAAGAACCAGAATGGTCTGAAATACCACAAAGCTATGCTCGGGTCGTCAG
AAGCGACGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATC
GGGGACCTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCC
CCTCGGGTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGG
ATTCCTCGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCA
CCGTACTTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGA
CTTCCCTCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTG
CAGCCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCC
GGACAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGG
AGAACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCT
TCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAA
TGGGGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAA
AGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGG
GTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010986-T1.utr3p1 | KJC3_010986-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010986-T1.utr5p1 | KJC3_010986-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4881712..4885328 - |
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