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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5026774..5028875+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011028-T1 ID=KJC3_011028-T1|Name=KJC3_011028-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2102bp|location=Sequence derived from alignment at ch7:5026774..5028875+ (Aspergillus niger KJC3)
GGCTCAAGTCCATACTATTCGCCCATCCACCGATGCACACGCATCGTCAA
GGATCGTTCTTCGATTCTTTCATCTCCTCTACCCTGTTTCCCTTATCGCT
ACTATGTGGACAGCTTATACCTAAATCTGGACCGCTGATTGATTGATTCG
GACGCATCACCCCTCGGCCAATGTGCCGGCTCTTGAACCTTATTGTTGCA
ATATGTGCGTGAGATTCCTCTTATATCGGCCCATGTCCCTTTTGGCCCCT
GCATATGTACCCCCCGTCCCTCAGGTGATTTCAATTGACCGGCCTTATCG
CGTCCCTCTAGGCTGCACTCCAGTGAGATGGCGAGCCTAGACTCCGCCTT
CGCGACGAGCTTCGCGAAAGAGACATGGGCCCTCTACAGTGTCGGAGTAT
TGGGCGCCATACTACGATTGTGAGCTCCCTTGACCCAGAGAGAGAGACCT
TCGGCGGATCATCGTGTATTGAAGTATTTCATACTGACCGTCTCCGTCGT
ATAGCGTAGCACGAATACGCCGATTGGGTTACCAGAACCTTCAAGCAGAT
GACTACTTGATGCTATTCGCCGTCGTCTGGTATACTCTATTATGTGTCGC
TCTCAACGAAGTAGCTTCTGGAGGCGGATCAAACCTGATGGACGAGAATG
ATATAAAGAATTTAACGCCATCGATCAAGGCGGATCGTGTCAGGGGAAGC
AAATGGGTTTTTGTATCAGAACATTCCTTTCTCCTCGCGATTTACGCCAT
GAAAGCATGTATGCTGGTTATATATGCCCGCATCACGTATGACTCTCTAT
CCCACAAACATTAAATTTAGATCTAACATTTCTTACCAGGGAAGGATTAC
GCCAACGCAAATGGGTGAATTATCTCGCTGTCTACGTTGCTCTAGGCTTC
GTTGCCAATGAATTGTCTCTGTTCCTCATCTGCCGGCCTTTATCGAATTA
CTGGGCCGTGCCTACTCCCTATGGTCAGTCGAAGAGATGAGCCCCGCAGA
AAGACGATGGCGGTTACTAACTTGTGTATAGAACAATGCTCGACATATCA
ATACTATGAAATTGTTCAAGGATGTCTATCGATATCTGCAGACGTCTTTA
TGCTTATCATTGGGCTGCCACTCATGGTTCAAGTGCGAGTGCCCCTCAAA
CAGAAGTTGATTCTCTTGATCCTATTCGGCATGGGCATCTTCGTCATTGT
CGCAGCCCTCCTGAACAAACTCTATTGTCTCGTTCCCTCCCTCATCTCCT
ATGTCTACATGAACTGGTATTTCCGGGAAGCGACAGTAGCTATCCTGGTC
ACCAACTTACCCCTCGTTTGGTCTCTCCTTCGCGATGTGTTCCCTGCGCT
CAAGAGCTGGACCGGAGGGTCACGACGAGCAACAACCGAACGCTATCGGA
GTGGTCCCTGGACAAGTAAGGGATCTGCATTTCGTCACTACGGCCCCCAC
AGTCAGTTGCAATCTGGCGAATACAGCATGCACAACTACAACCAAAGCAC
CGTTGTTGCGCCCCAGAAGACTATTTCGGAAGTCAGTCTCGAGCCGAGCG
ATGATCGCGAGCCCAGTGAGGACGGCTCCGAACGGGCCCTCAGAATCCGA
CAGGATGTGACGGTCACGGTGGAGCGTGAGGCGCGACCACCTGAGTATTG
GGAGTCCAAGAAGGCCCAAACTTCACAAGGCCGGCTCCCAGAACCATGAA
GGTCACGATTGTTTCATATTGCTCCATTTTTTTTCACTGAAACTATTTTC
TCAACGCTTGTATAGAAAACTTTTCTTTTCTCTTCTATTTTGACAACACT
CCCTTCATCAATTTTCCTTTCTTTCACGACACTCAAGTTCCACTTGCGGA
ATGATCTGATAACGGTGTCCGCTTGACTATTGTACATAACTTGCTCGGCA
CCCCATCGCTTAACGCCCATATTTCCACTGATCATCGGCATGTGGGGGAC
CAGGATGCCGAGAAGACATCCATTACGACCATGGTTCGGAAGATAGATGA
GGGACTAATTGGCACTTAGCGACAAGGATAGACAAAATGTATTGTGTGAT
ATAGTAATAGATAGACACCATCATTGAACTATACGTTCAGCTGAGCCGTT
TC back to topCoding sequence (CDS) from alignment at ch7:5026774..5028875+ >KJC3_011028-T1 ID=KJC3_011028-T1|Name=KJC3_011028-T1|organism=Aspergillus niger KJC3|type=CDS|length=5970bp|location=Sequence derived from alignment at ch7:5026774..5028875+ (Aspergillus niger KJC3)
ATGCTGCACTCCAGTGAGATGGCGAGCCTAGACTCCGCCTTCGCGACGAG
CTTCGCGAAAGAGACATGGGCCCTCTACAGTGTCGGAGTATTGGGCGCCA
TACTACGATTCGTAGCACGAATACGCCGATTGGGTTACCAGAACCTTCAA
GCAGATGACTACTTGATGCTATTCGCCGTCGTCTGGTATACTCTATTATG
TGTCGCTCTCAACGAAGTAGCTTCTGGAGGCGGATCAAACCTGATGGACG
AGAATGATATAAAGAATTTAACGCCATCGATCAAGGCGGATCGTGTCAGG
GGAAGCAAATGGGTTTTTGTATCAGAACATTCCTTTCTCCTCGCGATTTA
CGCCATGAAAGCATGTATGCTGGTTATATATGCCCGCATCACGGAAGGAT
TACGCCAACGCAAATGGGTGAATTATCTCGCTGTCTACGTTGCTCTAGGC
TTCGTTGCCAATGAATTGTCTCTGTTCCTCATCTGCCGGCCTTTATCGAA
TTACTGGGCCGTGCCTACTCCCTATGAACAATGCTCGACATATCAATACT
ATGAAATTGTTCAAGGATGTCTATCGATATCTGCAGACGTCTTTATGCTT
ATCATTGGGCTGCCACTCATGGTTCAAGTGCGAGTGCCCCTCAAACAGAA
GTTGATTCTCTTGATCCTATTCGGCATGGGCATCTTCGTCATTGTCGCAG
CCCTCCTGAACAAACTCTATTGTCTCGTTCCCTCCCTCATCTCCTATGTC
TACATGAACTGGTATTTCCGGGAAGCGACAGTAGCTATCCTGGTCACCAA
CTTACCCCTCGTTTGGTCTCTCCTTCGCGATGTGTTCCCTGCGCTCAAGA
GCTGGACCGGAGGGTCACGACGAGCAACAACCGAACGCTATCGGAGTGGT
CCCTGGACAAGTAAGGGATCTGCATTTCGTCACTACGGCCCCCACAGTCA
GTTGCAATCTGGCGAATACAGCATGCACAACTACAACCAAAGCACCGTTG
TTGCGCCCCAGAAGACTATTTCGGAAGTCAGTCTCGAGCCGAGCGATGAT
CGCGAGCCCAGTGAGGACGGCTCCGAACGGGCCCTCAGAATCCGACAGGA
TGTGACGGTCACGGTGGAGCGTGAGGCGCGACCACCTGAGTATTGGGAGT
CCAAGAAGGCCCAAACTTCACAAGGCCGGCTCCCAGAACCATGAATGCTG
CACTCCAGTGAGATGGCGAGCCTAGACTCCGCCTTCGCGACGAGCTTCGC
GAAAGAGACATGGGCCCTCTACAGTGTCGGAGTATTGGGCGCCATACTAC
GATTCGTAGCACGAATACGCCGATTGGGTTACCAGAACCTTCAAGCAGAT
GACTACTTGATGCTATTCGCCGTCGTCTGGTATACTCTATTATGTGTCGC
TCTCAACGAAGTAGCTTCTGGAGGCGGATCAAACCTGATGGACGAGAATG
ATATAAAGAATTTAACGCCATCGATCAAGGCGGATCGTGTCAGGGGAAGC
AAATGGGTTTTTGTATCAGAACATTCCTTTCTCCTCGCGATTTACGCCAT
GAAAGCATGTATGCTGGTTATATATGCCCGCATCACGGAAGGATTACGCC
AACGCAAATGGGTGAATTATCTCGCTGTCTACGTTGCTCTAGGCTTCGTT
GCCAATGAATTGTCTCTGTTCCTCATCTGCCGGCCTTTATCGAATTACTG
GGCCGTGCCTACTCCCTATGAACAATGCTCGACATATCAATACTATGAAA
TTGTTCAAGGATGTCTATCGATATCTGCAGACGTCTTTATGCTTATCATT
GGGCTGCCACTCATGGTTCAAGTGCGAGTGCCCCTCAAACAGAAGTTGAT
TCTCTTGATCCTATTCGGCATGGGCATCTTCGTCATTGTCGCAGCCCTCC
TGAACAAACTCTATTGTCTCGTTCCCTCCCTCATCTCCTATGTCTACATG
AACTGGTATTTCCGGGAAGCGACAGTAGCTATCCTGGTCACCAACTTACC
CCTCGTTTGGTCTCTCCTTCGCGATGTGTTCCCTGCGCTCAAGAGCTGGA
CCGGAGGGTCACGACGAGCAACAACCGAACGCTATCGGAGTGGTCCCTGG
ACAAGTAAGGGATCTGCATTTCGTCACTACGGCCCCCACAGTCAGTTGCA
ATCTGGCGAATACAGCATGCACAACTACAACCAAAGCACCGTTGTTGCGC
CCCAGAAGACTATTTCGGAAGTCAGTCTCGAGCCGAGCGATGATCGCGAG
CCCAGTGAGGACGGCTCCGAACGGGCCCTCAGAATCCGACAGGATGTGAC
GGTCACGGTGGAGCGTGAGGCGCGACCACCTGAGTATTGGGAGTCCAAGA
AGGCCCAAACTTCACAAGGCCGGCTCCCAGAACCATGAATGCTGCACTCC
AGTGAGATGGCGAGCCTAGACTCCGCCTTCGCGACGAGCTTCGCGAAAGA
GACATGGGCCCTCTACAGTGTCGGAGTATTGGGCGCCATACTACGATTCG
TAGCACGAATACGCCGATTGGGTTACCAGAACCTTCAAGCAGATGACTAC
TTGATGCTATTCGCCGTCGTCTGGTATACTCTATTATGTGTCGCTCTCAA
CGAAGTAGCTTCTGGAGGCGGATCAAACCTGATGGACGAGAATGATATAA
AGAATTTAACGCCATCGATCAAGGCGGATCGTGTCAGGGGAAGCAAATGG
GTTTTTGTATCAGAACATTCCTTTCTCCTCGCGATTTACGCCATGAAAGC
ATGTATGCTGGTTATATATGCCCGCATCACGGAAGGATTACGCCAACGCA
AATGGGTGAATTATCTCGCTGTCTACGTTGCTCTAGGCTTCGTTGCCAAT
GAATTGTCTCTGTTCCTCATCTGCCGGCCTTTATCGAATTACTGGGCCGT
GCCTACTCCCTATGAACAATGCTCGACATATCAATACTATGAAATTGTTC
AAGGATGTCTATCGATATCTGCAGACGTCTTTATGCTTATCATTGGGCTG
CCACTCATGGTTCAAGTGCGAGTGCCCCTCAAACAGAAGTTGATTCTCTT
GATCCTATTCGGCATGGGCATCTTCGTCATTGTCGCAGCCCTCCTGAACA
AACTCTATTGTCTCGTTCCCTCCCTCATCTCCTATGTCTACATGAACTGG
TATTTCCGGGAAGCGACAGTAGCTATCCTGGTCACCAACTTACCCCTCGT
TTGGTCTCTCCTTCGCGATGTGTTCCCTGCGCTCAAGAGCTGGACCGGAG
GGTCACGACGAGCAACAACCGAACGCTATCGGAGTGGTCCCTGGACAAGT
AAGGGATCTGCATTTCGTCACTACGGCCCCCACAGTCAGTTGCAATCTGG
CGAATACAGCATGCACAACTACAACCAAAGCACCGTTGTTGCGCCCCAGA
AGACTATTTCGGAAGTCAGTCTCGAGCCGAGCGATGATCGCGAGCCCAGT
GAGGACGGCTCCGAACGGGCCCTCAGAATCCGACAGGATGTGACGGTCAC
GGTGGAGCGTGAGGCGCGACCACCTGAGTATTGGGAGTCCAAGAAGGCCC
AAACTTCACAAGGCCGGCTCCCAGAACCATGAATGCTGCACTCCAGTGAG
ATGGCGAGCCTAGACTCCGCCTTCGCGACGAGCTTCGCGAAAGAGACATG
GGCCCTCTACAGTGTCGGAGTATTGGGCGCCATACTACGATTCGTAGCAC
GAATACGCCGATTGGGTTACCAGAACCTTCAAGCAGATGACTACTTGATG
CTATTCGCCGTCGTCTGGTATACTCTATTATGTGTCGCTCTCAACGAAGT
AGCTTCTGGAGGCGGATCAAACCTGATGGACGAGAATGATATAAAGAATT
TAACGCCATCGATCAAGGCGGATCGTGTCAGGGGAAGCAAATGGGTTTTT
GTATCAGAACATTCCTTTCTCCTCGCGATTTACGCCATGAAAGCATGTAT
GCTGGTTATATATGCCCGCATCACGGAAGGATTACGCCAACGCAAATGGG
TGAATTATCTCGCTGTCTACGTTGCTCTAGGCTTCGTTGCCAATGAATTG
TCTCTGTTCCTCATCTGCCGGCCTTTATCGAATTACTGGGCCGTGCCTAC
TCCCTATGAACAATGCTCGACATATCAATACTATGAAATTGTTCAAGGAT
GTCTATCGATATCTGCAGACGTCTTTATGCTTATCATTGGGCTGCCACTC
ATGGTTCAAGTGCGAGTGCCCCTCAAACAGAAGTTGATTCTCTTGATCCT
ATTCGGCATGGGCATCTTCGTCATTGTCGCAGCCCTCCTGAACAAACTCT
ATTGTCTCGTTCCCTCCCTCATCTCCTATGTCTACATGAACTGGTATTTC
CGGGAAGCGACAGTAGCTATCCTGGTCACCAACTTACCCCTCGTTTGGTC
TCTCCTTCGCGATGTGTTCCCTGCGCTCAAGAGCTGGACCGGAGGGTCAC
GACGAGCAACAACCGAACGCTATCGGAGTGGTCCCTGGACAAGTAAGGGA
TCTGCATTTCGTCACTACGGCCCCCACAGTCAGTTGCAATCTGGCGAATA
CAGCATGCACAACTACAACCAAAGCACCGTTGTTGCGCCCCAGAAGACTA
TTTCGGAAGTCAGTCTCGAGCCGAGCGATGATCGCGAGCCCAGTGAGGAC
GGCTCCGAACGGGCCCTCAGAATCCGACAGGATGTGACGGTCACGGTGGA
GCGTGAGGCGCGACCACCTGAGTATTGGGAGTCCAAGAAGGCCCAAACTT
CACAAGGCCGGCTCCCAGAACCATGAATGCTGCACTCCAGTGAGATGGCG
AGCCTAGACTCCGCCTTCGCGACGAGCTTCGCGAAAGAGACATGGGCCCT
CTACAGTGTCGGAGTATTGGGCGCCATACTACGATTCGTAGCACGAATAC
GCCGATTGGGTTACCAGAACCTTCAAGCAGATGACTACTTGATGCTATTC
GCCGTCGTCTGGTATACTCTATTATGTGTCGCTCTCAACGAAGTAGCTTC
TGGAGGCGGATCAAACCTGATGGACGAGAATGATATAAAGAATTTAACGC
CATCGATCAAGGCGGATCGTGTCAGGGGAAGCAAATGGGTTTTTGTATCA
GAACATTCCTTTCTCCTCGCGATTTACGCCATGAAAGCATGTATGCTGGT
TATATATGCCCGCATCACGGAAGGATTACGCCAACGCAAATGGGTGAATT
ATCTCGCTGTCTACGTTGCTCTAGGCTTCGTTGCCAATGAATTGTCTCTG
TTCCTCATCTGCCGGCCTTTATCGAATTACTGGGCCGTGCCTACTCCCTA
TGAACAATGCTCGACATATCAATACTATGAAATTGTTCAAGGATGTCTAT
CGATATCTGCAGACGTCTTTATGCTTATCATTGGGCTGCCACTCATGGTT
CAAGTGCGAGTGCCCCTCAAACAGAAGTTGATTCTCTTGATCCTATTCGG
CATGGGCATCTTCGTCATTGTCGCAGCCCTCCTGAACAAACTCTATTGTC
TCGTTCCCTCCCTCATCTCCTATGTCTACATGAACTGGTATTTCCGGGAA
GCGACAGTAGCTATCCTGGTCACCAACTTACCCCTCGTTTGGTCTCTCCT
TCGCGATGTGTTCCCTGCGCTCAAGAGCTGGACCGGAGGGTCACGACGAG
CAACAACCGAACGCTATCGGAGTGGTCCCTGGACAAGTAAGGGATCTGCA
TTTCGTCACTACGGCCCCCACAGTCAGTTGCAATCTGGCGAATACAGCAT
GCACAACTACAACCAAAGCACCGTTGTTGCGCCCCAGAAGACTATTTCGG
AAGTCAGTCTCGAGCCGAGCGATGATCGCGAGCCCAGTGAGGACGGCTCC
GAACGGGCCCTCAGAATCCGACAGGATGTGACGGTCACGGTGGAGCGTGA
GGCGCGACCACCTGAGTATTGGGAGTCCAAGAAGGCCCAAACTTCACAAG
GCCGGCTCCCAGAACCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011028-T1.utr5p1 | KJC3_011028-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011028-T1.utr3p1 | KJC3_011028-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5026774..5028875 + |
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