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KJC3_011030-T1, KJC3_011030-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011030-T1
Unique NameKJC3_011030-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5033955..5037228-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011030-T1 ID=KJC3_011030-T1|Name=KJC3_011030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3274bp|location=Sequence derived from alignment at ch7:5033955..5037228- (Aspergillus niger KJC3)
GACTCAATCAGCAGACGTCCTTCTCTCGTTCACACGGAACATTGCTTCCA
CATAATCTCTGAGCATTTTACTCATCCTCTTCGCCTTTACCTACATCTCT
TACCCTCTTGTGTTGCAACTTAAACCATAATCACTGATTAGCTCGTTTCC
ATCCCACATTCTTCCCTCACATTCCGCCCCAACATGAACGGCGCTCAATT
CACAGACAGAGCCAACAAGGCTTTGCTGGACTCCAGCAGCTTGGCAGAGC
AATACTCGCACTCTCAGATCCTTCCTGTTCATCTCGCCGTCTCTCTTCTC
AACCCTTCTCCCGATGAATCCAAAGACCAGCAAGCCCCCGCTCATCCTTC
CCACGAAACCTCCTCCGCCCCTCTCTTCCGCCAGGTCGTCGAACGCGCCC
ATGGCGATCCACAACTCCTGGAACGGTCCCTCATGAAAATGCTGGTCCGT
CTCCCTTCTCAGGATCCTCCGCCAGAGACTGTCAGTGTCTCGCCCGCACT
TGCCAAGGTCATCCGGTCGGCTTCCGAACTTTCCAAGACGCAAAAGGATA
GCTATGTCGCCATTGACCATCTCATCCTCTCCGCCGCGCAGGACTCGCAG
GTCCAGCGCGCCTTGGCCGATGCCAACATTCCCAACGTCAAGTTGATCGA
CAGTGCTGTCCAGCAGATCCGTGGTACAAAACGGGTCGACTCCAAGACTG
CGGATGCCGAAAGCGAAAACGAGAACCTGAAGAAATTCACCATCGACATG
ACTGCTCTGGCCAGAGAGGGAAAGATTGACCCTGTCATTGGCCGTGAAGA
GGAGATTCGTCGGGTAATTCGAATCCTGAGTCGCCGGACCAAGAACAACC
CAGTACTCATCGGTGAACCCGGTGTCGGAAAGACCACCATTGTCGAAGGC
CTGGCTCGTCGTATCGTTAACGCAGATATTCCGGCCAACCTAGCACAGTG
CCGGCTGCTGTCTCTCGACGTCGGCTCGCTTGTTGCAGGCAGCAAATATC
GCGGAGAGTTCGAAGAGCGGATGAAGGGCGTTCTGAAGGAGATTGAAGAA
TCAAAAGACACCATTGTTCTCTTTGTCGATGAAATTCATTTGCTCATGGG
CGCAGGCTCCAGCGGCGAAGGGGGCATGGATGCTGCCAACCTGTTGAAGC
CCATGCTGGCTCGTGGTCAGTTGCATTGCATTGGTGCGACCACCCTGGGC
GAATACCGCAAATACATCGAAAAGGACCAGGCTTTCGAGCGTCGTTTCCA
GCAAGTCCTCGTCAAGGAGCCTTCCGTTCCGGAAACCATCTCCATTCTGC
GTGGACTCAAGGAGAAGTACGAGGTGCATCACGGTGTCAACATCCTCGAC
GGCGCTATCGTGTCCGCTGCCACGCTAGCTGCGCGCTATCTGACCGCACG
CCGACTCCCCGACTCCGCAGTTGACCTGATCGATGAAGCCGCCGCTGCCG
TGCGGGTGACGCGCGAATCTGAGCCAGAGGCGCTAGACAACCTGGAGAGA
AAGCTCCGTCAGTTGCAGATTGAAATCCACGCTCTCGAGCGCGAGAAGGA
CGATGCTTCCAAAGCCCGTCTCGAAGCCGCCAAGCAAGAAGCAGCCAACG
TTACCGAAGAGCTGCGGCCTATGCGCGAGAAGTATGAGAGCGAAAAGCAG
CGCAGCAAGTCCATCCAGGACGCCAAGATCAAGCTCGACTCCCTCAAGGT
CAAGCGTGATGAAGCAGAGCGCTCTGGTGACACCCAAACAGCCGCCGATC
TCGAGTACTATGCCATCCCTGAGACCAAGGCCCTCATTGAGCGGCTCGAA
GTCGACCGCGCCAGGGCCGATGAAGAGCGGCGGGCACGTCAGGGCGATGC
CGGCGAAGCTCTGCTCGCGGACGCAGTCGGCCCCGAGCAAATCAACGAAA
TCGTCGCCCGTTGGACCGGTATCCCCGTGACACGGCTCAAGACCACCGAA
AAGGACAAGCTGCTGAACATGGAGAAGTACCTTGGCAAGGTCGTCGTTGG
TCAAAAGGAAGCGGTGACCTCGGTCTCCAACGCCATCCGACTCCAGCGGT
CTGGTCTCAGCAACCCCAACTCACCCCCTAGCTTCCTGTTCTGCGGTCCC
TCCGGTACCGGTAAGACCTTGCTGACCAAGGCCTTGGCCGAGTTCCTCTT
CGACGATCCCAAGGCCATGATCCGCTTCGACATGTCTGAATACCAAGAAC
GCCACTCCCTGAGCCGCATGATCGGCGCTCCGCCAGGCTACGTCGGCCAC
GACGCCGGCGGCCAGCTAACCGAGAGTCTCCGCCGACGGCCCTTCTCGAT
CCTGCTCTTCGACGAAGTCGAAAAAGCCGCCAAGGAAGTCCTGACCGTCC
TCCTCCAACTCATGGACGACGGCCGCATCACCGACGGCCAAGGCAGAATC
GTCGACGCCAAGAACTGCATCGTAGTCATGACCTCCAACCTGGGTGCCGA
ATTCCTCTCCCGCCCAACCACCAAGGACGGCCGCATCGATCCTCAAACCC
GCGAGCTCGTCATGGGCGCCCTGCGCGACTACTTCCTCCCTGAATTCCTC
AACCGCATCTCCAGCACCGTCATCTTCAACCGTCTCACCAAGCGCGAGAT
CCGCAAGATCGTCGACCTCCGTCTGGACGAGGTGCAGCGCCGTCTTGAGA
ACAATGACCGCAATGTCATCATCGAATGCTCCGACGAAGTCAAGGATTAC
CTGGGCGAAGCGGGTTACTCGCCCGCTTATGGTGCTCGTCCGCTCGGACG
GATTATCGAGCGCGAGGTGCTGAATCGTTTGGCGGTGCTGATTCTGCGCG
GCAGTGTGCGGGATGGCGAGGCCGCGAGGGTGGTTATGCGCGACGGCCGT
ATCGATGTCCTTCCTAATCATGAGATTCCGGCCGATGAGGATCAGGATAT
GATCGATGAGGATGATGAGGCGTTGGCGGAGATGGAGGATGGTAGTGGGG
ATATGGATTTGTATGATGAGTAGGGTGGTTGATGGGTAGATGGAAAAGTG
ATTGATTGATTGATTGATAGCGATTGTTTCTTTCATGATGTGATGATGTG
ATGATGAGCTTGTTTTCTTGCGCTTATCTGTTCTCTTCTTTTTATCTGTC
ATATTTGTGCTGCATATATGTTTGAAGATATTGGGCTGTACAGCTGATAT
ATTTCGAGGTGATATGATAATATGGGGGGTTGTTGCTGTCAATTAGATGG
CATACACGCTTTGATAATATCTTACTGGTGTATAGTATGATAAATTGGAT
TAAATGTCACTTCCTCAAGGCTAG
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Coding sequence (CDS) from alignment at ch7:5033955..5037228-

>KJC3_011030-T1 ID=KJC3_011030-T1|Name=KJC3_011030-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch7:5033955..5037228- (Aspergillus niger KJC3)
ATGAACGGCGCTCAATTCACAGACAGAGCCAACAAGGCTTTGCTGGACTC
CAGCAGCTTGGCAGAGCAATACTCGCACTCTCAGATCCTTCCTGTTCATC
TCGCCGTCTCTCTTCTCAACCCTTCTCCCGATGAATCCAAAGACCAGCAA
GCCCCCGCTCATCCTTCCCACGAAACCTCCTCCGCCCCTCTCTTCCGCCA
GGTCGTCGAACGCGCCCATGGCGATCCACAACTCCTGGAACGGTCCCTCA
TGAAAATGCTGGTCCGTCTCCCTTCTCAGGATCCTCCGCCAGAGACTGTC
AGTGTCTCGCCCGCACTTGCCAAGGTCATCCGGTCGGCTTCCGAACTTTC
CAAGACGCAAAAGGATAGCTATGTCGCCATTGACCATCTCATCCTCTCCG
CCGCGCAGGACTCGCAGGTCCAGCGCGCCTTGGCCGATGCCAACATTCCC
AACGTCAAGTTGATCGACAGTGCTGTCCAGCAGATCCGTGGTACAAAACG
GGTCGACTCCAAGACTGCGGATGCCGAAAGCGAAAACGAGAACCTGAAGA
AATTCACCATCGACATGACTGCTCTGGCCAGAGAGGGAAAGATTGACCCT
GTCATTGGCCGTGAAGAGGAGATTCGTCGGGTAATTCGAATCCTGAGTCG
CCGGACCAAGAACAACCCAGTACTCATCGGTGAACCCGGTGTCGGAAAGA
CCACCATTGTCGAAGGCCTGGCTCGTCGTATCGTTAACGCAGATATTCCG
GCCAACCTAGCACAGTGCCGGCTGCTGTCTCTCGACGTCGGCTCGCTTGT
TGCAGGCAGCAAATATCGCGGAGAGTTCGAAGAGCGGATGAAGGGCGTTC
TGAAGGAGATTGAAGAATCAAAAGACACCATTGTTCTCTTTGTCGATGAA
ATTCATTTGCTCATGGGCGCAGGCTCCAGCGGCGAAGGGGGCATGGATGC
TGCCAACCTGTTGAAGCCCATGCTGGCTCGTGGTCAGTTGCATTGCATTG
GTGCGACCACCCTGGGCGAATACCGCAAATACATCGAAAAGGACCAGGCT
TTCGAGCGTCGTTTCCAGCAAGTCCTCGTCAAGGAGCCTTCCGTTCCGGA
AACCATCTCCATTCTGCGTGGACTCAAGGAGAAGTACGAGGTGCATCACG
GTGTCAACATCCTCGACGGCGCTATCGTGTCCGCTGCCACGCTAGCTGCG
CGCTATCTGACCGCACGCCGACTCCCCGACTCCGCAGTTGACCTGATCGA
TGAAGCCGCCGCTGCCGTGCGGGTGACGCGCGAATCTGAGCCAGAGGCGC
TAGACAACCTGGAGAGAAAGCTCCGTCAGTTGCAGATTGAAATCCACGCT
CTCGAGCGCGAGAAGGACGATGCTTCCAAAGCCCGTCTCGAAGCCGCCAA
GCAAGAAGCAGCCAACGTTACCGAAGAGCTGCGGCCTATGCGCGAGAAGT
ATGAGAGCGAAAAGCAGCGCAGCAAGTCCATCCAGGACGCCAAGATCAAG
CTCGACTCCCTCAAGGTCAAGCGTGATGAAGCAGAGCGCTCTGGTGACAC
CCAAACAGCCGCCGATCTCGAGTACTATGCCATCCCTGAGACCAAGGCCC
TCATTGAGCGGCTCGAAGTCGACCGCGCCAGGGCCGATGAAGAGCGGCGG
GCACGTCAGGGCGATGCCGGCGAAGCTCTGCTCGCGGACGCAGTCGGCCC
CGAGCAAATCAACGAAATCGTCGCCCGTTGGACCGGTATCCCCGTGACAC
GGCTCAAGACCACCGAAAAGGACAAGCTGCTGAACATGGAGAAGTACCTT
GGCAAGGTCGTCGTTGGTCAAAAGGAAGCGGTGACCTCGGTCTCCAACGC
CATCCGACTCCAGCGGTCTGGTCTCAGCAACCCCAACTCACCCCCTAGCT
TCCTGTTCTGCGGTCCCTCCGGTACCGGTAAGACCTTGCTGACCAAGGCC
TTGGCCGAGTTCCTCTTCGACGATCCCAAGGCCATGATCCGCTTCGACAT
GTCTGAATACCAAGAACGCCACTCCCTGAGCCGCATGATCGGCGCTCCGC
CAGGCTACGTCGGCCACGACGCCGGCGGCCAGCTAACCGAGAGTCTCCGC
CGACGGCCCTTCTCGATCCTGCTCTTCGACGAAGTCGAAAAAGCCGCCAA
GGAAGTCCTGACCGTCCTCCTCCAACTCATGGACGACGGCCGCATCACCG
ACGGCCAAGGCAGAATCGTCGACGCCAAGAACTGCATCGTAGTCATGACC
TCCAACCTGGGTGCCGAATTCCTCTCCCGCCCAACCACCAAGGACGGCCG
CATCGATCCTCAAACCCGCGAGCTCGTCATGGGCGCCCTGCGCGACTACT
TCCTCCCTGAATTCCTCAACCGCATCTCCAGCACCGTCATCTTCAACCGT
CTCACCAAGCGCGAGATCCGCAAGATCGTCGACCTCCGTCTGGACGAGGT
GCAGCGCCGTCTTGAGAACAATGACCGCAATGTCATCATCGAATGCTCCG
ACGAAGTCAAGGATTACCTGGGCGAAGCGGGTTACTCGCCCGCTTATGGT
GCTCGTCCGCTCGGACGGATTATCGAGCGCGAGGTGCTGAATCGTTTGGC
GGTGCTGATTCTGCGCGGCAGTGTGCGGGATGGCGAGGCCGCGAGGGTGG
TTATGCGCGACGGCCGTATCGATGTCCTTCCTAATCATGAGATTCCGGCC
GATGAGGATCAGGATATGATCGATGAGGATGATGAGGCGTTGGCGGAGAT
GGAGGATGGTAGTGGGGATATGGATTTGTATGATGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HSP98KJC3_011030Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011030-T1.cdsKJC3_011030-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011030-T1.utr3p1KJC3_011030-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011030-T1.exon1KJC3_011030-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011030-T1.utr5p1KJC3_011030-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011030-T1KJC3_011030-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR018368
DBxrefInterPro:IPR028299
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR036628
DBxrefInterPro:IPR041546
DBxrefInterPro:IPR004176
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR019489
DBxrefInterPro:IPR001270
DBxrefPFAM:PF00158
DBxrefPFAM:PF02861
DBxrefPFAM:PF10431
DBxrefPFAM:PF17871
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
ProductHeat shock protein hsp98
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5033955..5037228 -
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