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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5057556..5058547- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011035-T1 ID=KJC3_011035-T1|Name=KJC3_011035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=992bp|location=Sequence derived from alignment at ch7:5057556..5058547- (Aspergillus niger KJC3)
GCAAGATGCAAACCAAACCACCAACAAACCTCGAACCGGCTATCAAGCTC
AAACCACAAACAAGCACACTATACACTACACCACATAACAGACGACCTTA
CCTCGAAGAAGAGAGAAAGAAAGACAGAAGAAGAGAAAAAGAAAATGACC
ACAGAAATCAAAGAACTCTCCCTCCCCCTCCCCTACACTCCCCACACGAC
CGCCCACATCCACCTCACACGACACCAAACCTGCACGACGGTGTTTCTGA
CCTCATCGACGCCGGGCGATGCAGCAGGCAGTATCAAGCCGATGGGGAGT
TTTGTGTATGCGATGCCGGATGTACGTATCCCCCCTTCTTCTTTTCATTT
AACATCCAATATATCATCCCTATTTCTTGTTCTTCAATCCATCGGTTATT
TGATATTACTATTCCATCCATGCCTTTGCTGTTTCATCTTATCCTCTTAC
ATATACCACATGCATATCATAAGGTCCATCATGTATAATCATAGTATGAG
TATATGGGATATAATCTGATATAAGGAAAACACACAGAGAATGGATCCTA
AAAATGTGATCTCAACAACAATCTACTCCGTCCCCGGAAGTGTAGAATAC
ACGGCCCGGATTGCGAAGATTCTTGCGAGGAGGTTGAAGACGCCTGTTTA
TGTGGGCGGGAGTATTGAGCCCGCGACGATGGGGGTGATGGCTGAGGAGG
AGATTGAGGGGGTGAAGAGGCTTGTGGAGGTTATTGTGAAGGGGTGGGAG
GGGGTTAAGGTTTAATTTTCATTTTCTAGTTTCTATTTTCTGTTAGCTGT
TGATTATACGTGTGTTCTGTTCGTTGATGGTAGATGTTGGGGAATGAATG
GATGGAAGGATGATGGCATTGGGGGGAGTTGGGTGTTTCTTTGCAAATTC
TGTCTGCTTATTTTCTTGTTCTGGCTCTGAGTGCTGAATAACATATTAGG
AGTAACTAACTATAGTCATGATATGGCAATCGAATTACTACC back to topCoding sequence (CDS) from alignment at ch7:5057556..5058547- >KJC3_011035-T1 ID=KJC3_011035-T1|Name=KJC3_011035-T1|organism=Aspergillus niger KJC3|type=CDS|length=810bp|location=Sequence derived from alignment at ch7:5057556..5058547- (Aspergillus niger KJC3)
AGAATGGATCCTAAAAATGTGATCTCAACAACAATCTACTCCGTCCCCGG
AAGTGTAGAATACACGGCCCGGATTGCGAAGATTCTTGCGAGGAGGTTGA
AGACGCCTGTTTATGTGGGCGGGAGTATTGAGCCCGCGACGATGGGGGTG
ATGGCTGAGGAGGAGATTGAGGGGGTGAAGAGGCTTGTGGAGGTTATTGT
GAAGGGGTGGGAGGGGGTTAAGGTTTAAATGACCACAGAAATCAAAGAAC
TCTCCCTCCCCCTCCCCTACACTCCCCACACGACCGCCCACATCCACCTC
ACACGACACCAAACCTGCACGACGGTGTTTCTGACCTCATCGACGCCGGG
CGATGCAGCAGGCAGTATCAAGCCGATGGGGAGTTTTGTGTATGCGATGC
CGGATAGAATGGATCCTAAAAATGTGATCTCAACAACAATCTACTCCGTC
CCCGGAAGTGTAGAATACACGGCCCGGATTGCGAAGATTCTTGCGAGGAG
GTTGAAGACGCCTGTTTATGTGGGCGGGAGTATTGAGCCCGCGACGATGG
GGGTGATGGCTGAGGAGGAGATTGAGGGGGTGAAGAGGCTTGTGGAGGTT
ATTGTGAAGGGGTGGGAGGGGGTTAAGGTTTAAATGACCACAGAAATCAA
AGAACTCTCCCTCCCCCTCCCCTACACTCCCCACACGACCGCCCACATCC
ACCTCACACGACACCAAACCTGCACGACGGTGTTTCTGACCTCATCGACG
CCGGGCGATGCAGCAGGCAGTATCAAGCCGATGGGGAGTTTTGTGTATGC
GATGCCGGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0043248 | proteasome assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011035-T1.utr3p1 | KJC3_011035-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011035-T1.utr5p1 | KJC3_011035-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032157 |
| DBxref | PFAM:PF16093 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5057556..5058547 - |
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