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KJC3_011036-T2, KJC3_011036-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011036-T2
Unique NameKJC3_011036-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5058624..5060411+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011036-T2 ID=KJC3_011036-T2|Name=KJC3_011036-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1788bp|location=Sequence derived from alignment at ch7:5058624..5060411+ (Aspergillus niger KJC3)
CTTTTCTACTCTTGGTTACCACCATTCTTTCTGTAACTACAGTAGGTTTT
TGAACGTAGGTAAGTACATTCTGTTGTTGCTGCTGTCTGGGTAGAGTAAT
GTTTTTGTGTCATGGAATTTTGGACTACTGTGCATGCTAATTGCTACAAA
GTACTGCAATGGACGAGCACGAGCCAGATGAAATCCGCAGCTGGTCTGGC
GATTTCGACCCCCTGGCCGATAATGCCGAGCGTCGTGTGCTCTTTGCTGC
TTTTGATTCTTTCAGGTGAGTCATTTTGTTACGTGCTGCAGGGTCGCGTT
GCTTAAACACAACTCGTGGTAATCCGCTGGCATGTCATCTACGTTGCTTG
CTAAACACGCTCAGGCAATATCGGAGAACGGCGCACATGAACACCACTCA
CCGTCGTCGTCAGGCCTTTTATGCCCTGCCCTCTGCACACTGGCAGATGC
TGGCCGAGCCGCCCTTCTCCATTCTCGACAACTTCAACCGCGTGGACGAC
GCCATCGACGTGAATGCCGACATCGCAGATGCCATTCTGACCACGGGTCT
CTCGTCGTTCGGGCTCTCTGCGAACCCTGATCCCAGTGACCCGCGTCAGA
ACTGGCACGGGACGGCCACCCAGTCCGATGTCAACAAGGCGCACTCCACC
CTGAGACAGTTCTACCGCGACTGGAGCCATGAAGGCCAAGCAGAGCGAGA
TGTCTGCTACGGCCCTGTGCTGTCCGACTTGCAAGATGAGTTCGGGGCGC
GCATTGGCTCCTCCGAAGATGAGGACGAAGTCAGGGTGTTGGTTCCTGGC
GCCGGTCTGGGGAGACTAGTGTTTGAGATCTGTCGGCAAGGGTTCGCCGC
GGAAGGAAACGAGATCTCCTATCATCAGTTGCTGGCGAGTAGCTGGATCC
TGAACCACACGCTCGGCCCTCAGAAACACGCGCTGCATCCCTTTGCGCTG
CATTTCTCGAACCTCCTGTCCCGGGAGCAACAGCTGCAAGAGGTCAAGAT
CCCGGATCAGCATCCGGGTACGGCCATGGTGGAAGCCCAGGCGAACTCGG
CGCCATTTGGGCGGATGAGCATGTCGGCTGCCGACTTTACCGTGCTATAC
ACCAACCCCAGCAATAAGGAGGTGTTTGATGCCGTGGCGACGGTGTTTTT
CATCGACACGGCGCCGAACCTCATCCGATACATCGAGGCGATCCGACACT
GCCTCAAGCCCAACGGCGTCTGGATCAACGTGGGACCGTTATTGTGGCAT
TTCGAGGACGGGAGCAACCGCAGTCAGCACGGAGGCAGTGACGAGGGCCA
CGGTGACCAGGGGATTGGGGAGCCCGGGAATGTGGAGCTGACGGAGGCAG
AAGTGTTCTGCCTCGTGGAGCGAATGGGCTTTGCGATCGAGAAGCGCGAG
GCGCCGGACAGGCGACCCATGTGTGGGTATATCCAGGACCCGGACAGTAT
GTTGCAGCCATTGTATCGGCCGTCGCATTGGGTAGCACGGAAACAGGCCG
TATAAAAGTGATATTCAATGTGTATAATTTTTTCACCTTTTTCCTTGTAG
ATAGATAATGGTAGTGATGAGGATGATGATGATTTAAACAGACCGACCGG
TGTCGGTCGGTAGTTGACTAGTAAGTAAGCAAGCAAGCAAAGAAGAGCTG
TGGGATGTGGGATGTGTCATGAAAGATACCATACCGAAATAAACCAGATC
GGCGATACGGGCACAGATTCTCAGCCGCAGACACGAAACAAAGAAGCAGA
AGGAAACAGTGACAGACAGACGGACAGACAGACAGACG
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Coding sequence (CDS) from alignment at ch7:5058624..5060411+

>KJC3_011036-T2 ID=KJC3_011036-T2|Name=KJC3_011036-T2|organism=Aspergillus niger KJC3|type=CDS|length=1119bp|location=Sequence derived from alignment at ch7:5058624..5060411+ (Aspergillus niger KJC3)
ATGAACACCACTCACCGTCGTCGTCAGGCCTTTTATGCCCTGCCCTCTGC
ACACTGGCAGATGCTGGCCGAGCCGCCCTTCTCCATTCTCGACAACTTCA
ACCGCGTGGACGACGCCATCGACGTGAATGCCGACATCGCAGATGCCATT
CTGACCACGGGTCTCTCGTCGTTCGGGCTCTCTGCGAACCCTGATCCCAG
TGACCCGCGTCAGAACTGGCACGGGACGGCCACCCAGTCCGATGTCAACA
AGGCGCACTCCACCCTGAGACAGTTCTACCGCGACTGGAGCCATGAAGGC
CAAGCAGAGCGAGATGTCTGCTACGGCCCTGTGCTGTCCGACTTGCAAGA
TGAGTTCGGGGCGCGCATTGGCTCCTCCGAAGATGAGGACGAAGTCAGGG
TGTTGGTTCCTGGCGCCGGTCTGGGGAGACTAGTGTTTGAGATCTGTCGG
CAAGGGTTCGCCGCGGAAGGAAACGAGATCTCCTATCATCAGTTGCTGGC
GAGTAGCTGGATCCTGAACCACACGCTCGGCCCTCAGAAACACGCGCTGC
ATCCCTTTGCGCTGCATTTCTCGAACCTCCTGTCCCGGGAGCAACAGCTG
CAAGAGGTCAAGATCCCGGATCAGCATCCGGGTACGGCCATGGTGGAAGC
CCAGGCGAACTCGGCGCCATTTGGGCGGATGAGCATGTCGGCTGCCGACT
TTACCGTGCTATACACCAACCCCAGCAATAAGGAGGTGTTTGATGCCGTG
GCGACGGTGTTTTTCATCGACACGGCGCCGAACCTCATCCGATACATCGA
GGCGATCCGACACTGCCTCAAGCCCAACGGCGTCTGGATCAACGTGGGAC
CGTTATTGTGGCATTTCGAGGACGGGAGCAACCGCAGTCAGCACGGAGGC
AGTGACGAGGGCCACGGTGACCAGGGGATTGGGGAGCCCGGGAATGTGGA
GCTGACGGAGGCAGAAGTGTTCTGCCTCGTGGAGCGAATGGGCTTTGCGA
TCGAGAAGCGCGAGGCGCCGGACAGGCGACCCATGTGTGGGTATATCCAG
GACCCGGACAGTATGTTGCAGCCATTGTATCGGCCGTCGCATTGGGTAGC
ACGGAAACAGGCCGTATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011036KJC3_011036Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011036-T2KJC3_011036-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011036-T2.utr5p1KJC3_011036-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011036-T2.utr5p2KJC3_011036-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011036-T2.exon1KJC3_011036-T2.exon1Aspergillus niger KJC3exon
KJC3_011036-T2.exon2KJC3_011036-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011036-T2.cdsKJC3_011036-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011036-T2.utr3p1KJC3_011036-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR012901
DBxrefPFAM:PF07942
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5058624..5060411 +
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