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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5073287..5074937- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011041-T1 ID=KJC3_011041-T1|Name=KJC3_011041-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1651bp|location=Sequence derived from alignment at ch7:5073287..5074937- (Aspergillus niger KJC3)
CATCATTTGACGTCTGAGAAACTATATCTACGGCCATCACGGTTCTTACA
AGAGGACTCAGGAGACGATGCCCCAGCACTTCCACAAGCTTTACACATGA
GCACTTGGTTCCCAACTTGTCATCATGCCTGCTGGATCTTGTCAAGTCTA
TGGCTCCGTATCTGGTGAGGACATCAACAGTTACCCCAAATATACGGGTT
CGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTCTTCCTCCGTAACATC
TTCTACCTACCGTGCATTTTCTTGCCTCTCACGCCATGGTCATGTGGAAG
TCTGGATGAGCTGTATCCTTCCCTAGCCAATATCTTCGATATCTGTCTTC
ATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTTGCCTCACTCCCATTA
TTCATTTGGCTTCCATTCGGTGTCTATGTTCTGTATATTTTGACCGCTCT
GGCCCTGAATACGCTCATCTGCTACGCTTTGAACCGGGGAATCCCAGCCG
ACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGGCGGTGGAATCGCCAT
GAGGACGAGTATTGGATATTCCTCAATGGAATTTGCGTCGGGTTGGTGTT
TATTGCATTCTATTTCGCAAGTACAAGACTGACCGAATCAGGAGGAACTG
GCTGCAGAATAACGTCGATCGCATATCGCGGACATTCCACCGTCCAGTTG
TTGGTGTCCACAATAAAACGTAGACTTCCCCGTGCTTGTTGTATCGAAAT
CTCCCGATAAATGGATCCCTGATAGTGACTAGGGCCGGTGTCATATTCGA
CATTATCCAATGCCTCATTCAACGTTCCTTGTTGTACGCGACAAATGACG
TCCGAGACTGCTACGTGTTGGTTAGAAGAGCCTTGTATCGGTCGGAGATC
AAAAAGGTTGTTTTAATCCTACACTCGCAAGGGGGCATCGAGGGTGGAAT
GATCCTGGATTGGCTTCTCGACGAAGTACCGCAGGATCTTATCCGGCAAC
TGGAGATTTACACCTTTGGTTGTCTTGCAAATCACTTCAACAACCCGTAT
CGCGACATAGCATCGTGTAACGCAGCCATGCGCTATGTGCGCACGGGAGA
AATCACTGGCAATGTTCGCAACCGCACAATTCTACACATCGAGCACTATG
CCAACCAACGTGATTTTGCATGTCGCTTTGGGGTGCTTAATTTTGACCAC
AGTAAGCCACGGGACCGTCGCGAAAACCGGTTCATGGGTAAGGTGCTTGT
AAGTCCGGCTTCAGGCCACCAATTCAATCAGCATTACCTTGATACGATGT
TCCCACTGGATCCAACCAATCGATTTACGCGGGAGCCGCGGGAGGGTGAC
TTCATGGACACGGATGTCATAGTAAGTCGACATGATCGGCCTGAAGAAGA
CAGGCCTGTCACGGTCCTCGATGCAGCGGGGCTGTTGGACGCAGGCACTG
GGGAAGTAGATGGCACCAGTCTGAACTCGGTACTCTCTGGTAGCACGCAA
AACATGAAAGTTGGGCTCAATATGAGGTTGAAGATGCACCAAATGAGCAG
ATTGTGGTTATATCGAAATGGCGGCCGTCCAGTCGCATGAGCTAGCCTTC
TATCTCTGAGGGAGGTAAGGCTTTTTATATGTATTATAGCTGTGTGTGAA
C back to topCoding sequence (CDS) from alignment at ch7:5073287..5074937- >KJC3_011041-T1 ID=KJC3_011041-T1|Name=KJC3_011041-T1|organism=Aspergillus niger KJC3|type=CDS|length=4059bp|location=Sequence derived from alignment at ch7:5073287..5074937- (Aspergillus niger KJC3)
GGCCGGTGTCATATTCGACATTATCCAATGCCTCATTCAACGTTCCTTGT
TGTACGCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTAGAAGAGCC
TTGTATCGGTCGGAGATCAAAAAGGTTGTTTTAATCCTACACTCGCAAGG
GGGCATCGAGGGTGGAATGATCCTGGATTGGCTTCTCGACGAAGTACCGC
AGGATCTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTCTTGCAAAT
CACTTCAACAACCCGTATCGCGACATAGCATCGTGTAACGCAGCCATGCG
CTATGTGCGCACGGGAGAAATCACTGGCAATGTTCGCAACCGCACAATTC
TACACATCGAGCACTATGCCAACCAACGTGATTTTGCATGTCGCTTTGGG
GTGCTTAATTTTGACCACAGTAAGCCACGGGACCGTCGCGAAAACCGGTT
CATGGGTAAGGTGCTTGTAAGTCCGGCTTCAGGCCACCAATTCAATCAGC
ATTACCTTGATACGATGTTCCCACTGGATCCAACCAATCGATTTACGCGG
GAGCCGCGGGAGGGTGACTTCATGGACACGGATGTCATAGTAAGTCGACA
TGATCGGCCTGAAGAAGACAGGCCTGTCACGGTCCTCGATGCAGCGGGGC
TGTTGGACGCAGGCACTGGGGAAGTAGATGGCACCAGTCTGAACTCGGTA
CTCTCTGGTAGCACGCAAAACATGAAAGTTGGGCTCAATATGAGGTTGAA
GATGCACCAAATGAGCAGATTGTGGTTATATCGAAATGGCGGCCGTCCAG
TCGCATGAGAGGAACTGGCTGCAGAATAACGTCGATCGCATATCGCGGAC
ATTCCACCGTCCAGTTGTTGGTGTCCACAATAAAACATGCCTGCTGGATC
TTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTTACCCCA
AATATACGGGTTCGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTCTTC
CTCCGTAACATCTTCTACCTACCGTGCATTTTCTTGCCTCTCACGCCATG
GTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATATCTTCG
ATATCTGTCTTCATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTTGCC
TCACTCCCATTATTCATTTGGCTTCCATTCGGTGTCTATGTTCTGTATAT
TTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGAACCGGG
GAATCCCAGCCGACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGGCGG
TGGAATCGCCATGAGGACGAGTATTGGATATTCCTCAATGGAATTTGCGT
CGGGGCCGGTGTCATATTCGACATTATCCAATGCCTCATTCAACGTTCCT
TGTTGTACGCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTAGAAGA
GCCTTGTATCGGTCGGAGATCAAAAAGGTTGTTTTAATCCTACACTCGCA
AGGGGGCATCGAGGGTGGAATGATCCTGGATTGGCTTCTCGACGAAGTAC
CGCAGGATCTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTCTTGCA
AATCACTTCAACAACCCGTATCGCGACATAGCATCGTGTAACGCAGCCAT
GCGCTATGTGCGCACGGGAGAAATCACTGGCAATGTTCGCAACCGCACAA
TTCTACACATCGAGCACTATGCCAACCAACGTGATTTTGCATGTCGCTTT
GGGGTGCTTAATTTTGACCACAGTAAGCCACGGGACCGTCGCGAAAACCG
GTTCATGGGTAAGGTGCTTGTAAGTCCGGCTTCAGGCCACCAATTCAATC
AGCATTACCTTGATACGATGTTCCCACTGGATCCAACCAATCGATTTACG
CGGGAGCCGCGGGAGGGTGACTTCATGGACACGGATGTCATAGTAAGTCG
ACATGATCGGCCTGAAGAAGACAGGCCTGTCACGGTCCTCGATGCAGCGG
GGCTGTTGGACGCAGGCACTGGGGAAGTAGATGGCACCAGTCTGAACTCG
GTACTCTCTGGTAGCACGCAAAACATGAAAGTTGGGCTCAATATGAGGTT
GAAGATGCACCAAATGAGCAGATTGTGGTTATATCGAAATGGCGGCCGTC
CAGTCGCATGAGAGGAACTGGCTGCAGAATAACGTCGATCGCATATCGCG
GACATTCCACCGTCCAGTTGTTGGTGTCCACAATAAAACATGCCTGCTGG
ATCTTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTTACC
CCAAATATACGGGTTCGCCATTGCTGCTGTTCCTCGCTGATCTGTGGCTC
TTCCTCCGTAACATCTTCTACCTACCGTGCATTTTCTTGCCTCTCACGCC
ATGGTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATATCT
TCGATATCTGTCTTCATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTCCTT
GCCTCACTCCCATTATTCATTTGGCTTCCATTCGGTGTCTATGTTCTGTA
TATTTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGAACC
GGGGAATCCCAGCCGACGGTCTCAGGTCAACGGAAGATGATTTCTCAAGG
CGGTGGAATCGCCATGAGGACGAGTATTGGATATTCCTCAATGGAATTTG
CGTCGGGGCCGGTGTCATATTCGACATTATCCAATGCCTCATTCAACGTT
CCTTGTTGTACGCGACAAATGACGTCCGAGACTGCTACGTGTTGGTTAGA
AGAGCCTTGTATCGGTCGGAGATCAAAAAGGTTGTTTTAATCCTACACTC
GCAAGGGGGCATCGAGGGTGGAATGATCCTGGATTGGCTTCTCGACGAAG
TACCGCAGGATCTTATCCGGCAACTGGAGATTTACACCTTTGGTTGTCTT
GCAAATCACTTCAACAACCCGTATCGCGACATAGCATCGTGTAACGCAGC
CATGCGCTATGTGCGCACGGGAGAAATCACTGGCAATGTTCGCAACCGCA
CAATTCTACACATCGAGCACTATGCCAACCAACGTGATTTTGCATGTCGC
TTTGGGGTGCTTAATTTTGACCACAGTAAGCCACGGGACCGTCGCGAAAA
CCGGTTCATGGGTAAGGTGCTTGTAAGTCCGGCTTCAGGCCACCAATTCA
ATCAGCATTACCTTGATACGATGTTCCCACTGGATCCAACCAATCGATTT
ACGCGGGAGCCGCGGGAGGGTGACTTCATGGACACGGATGTCATAGTAAG
TCGACATGATCGGCCTGAAGAAGACAGGCCTGTCACGGTCCTCGATGCAG
CGGGGCTGTTGGACGCAGGCACTGGGGAAGTAGATGGCACCAGTCTGAAC
TCGGTACTCTCTGGTAGCACGCAAAACATGAAAGTTGGGCTCAATATGAG
GTTGAAGATGCACCAAATGAGCAGATTGTGGTTATATCGAAATGGCGGCC
GTCCAGTCGCATGAGAGGAACTGGCTGCAGAATAACGTCGATCGCATATC
GCGGACATTCCACCGTCCAGTTGTTGGTGTCCACAATAAAACATGCCTGC
TGGATCTTGTCAAGTCTATGGCTCCGTATCTGGTGAGGACATCAACAGTT
ACCCCAAATATACGGGTTCGCCATTGCTGCTGTTCCTCGCTGATCTGTGG
CTCTTCCTCCGTAACATCTTCTACCTACCGTGCATTTTCTTGCCTCTCAC
GCCATGGTCATGTGGAAGTCTGGATGAGCTGTATCCTTCCCTAGCCAATA
TCTTCGATATCTGTCTTCATTGTGTTTTGTTTGTCCTCCAGCTCGTCTTC
CTTGCCTCACTCCCATTATTCATTTGGCTTCCATTCGGTGTCTATGTTCT
GTATATTTTGACCGCTCTGGCCCTGAATACGCTCATCTGCTACGCTTTGA
ACCGGGGAATCCCAGCCGACGGTCTCAGGTCAACGGAAGATGATTTCTCA
AGGCGGTGGAATCGCCATGAGGACGAGTATTGGATATTCCTCAATGGAAT
TTGCGTCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011041-T1.utr3p1 | KJC3_011041-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011041-T1.utr5p1 | KJC3_011041-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5073287..5074937 - |
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