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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5085509..5087046+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011046-T1 ID=KJC3_011046-T1|Name=KJC3_011046-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1538bp|location=Sequence derived from alignment at ch7:5085509..5087046+ (Aspergillus niger KJC3)
ATGACCACTCCCCGCGAATACCCCGTGGTGCCCCGCGAGAGCACCCTATC
CCAGCTGCCCCCCGAATCCTCCCTCAACGCCCAAGACCAAATCTCCGAGC
TCCTCTCCACCGCATCACTTAGTCGTCTCGTCGTACTCGACGACGACCCA
ACCGGCACCCAGACATGCCATGACATCGCCGTCCTCACAGTCTGGGACAT
CCCGACTCTCCAAGCCGAACTGCAACAACCCTCTCCGGGCTTCTTCATCC
TCACCAACTCGCGCGCCCTGCCCCCCCTGGAGGCCGAGAAGCTAATCCGC
ACCATCTGCGAAAACGTCCAGCAGGCCGCCAACCTCGCTGGAACCACCGT
GGACATCGTCCTACGCGGCGACAGCACTCTCCGCGGACACTTCCCCCTCG
AAGCCGATGTCGCGCAGTCCGTCTTCGGTCCCGCGGACGCCATCATCCTC
GCCCCGTTCTTCTTCCAGGGCGGTCGCCTCACCATCAACGACATCCACTA
CGTCGCCGAAGGAGACAACCTCGTCCCAGCCGGCGCAACCCAGTTCGCCC
GCGACGCAACCTTCGGGTTTAAGAGCTCCAACCTCCATGACTACGTGCTC
GAGAAGGCGCCGGGACGGTTCACCCCGGAGCAAATTCACTCCATCACCAT
CGAGGACATTAGAGTCAATGGACCCAGCACCATCTGCGAGAAGCTCCTCG
CTTTGCCGAAGGGGAGCGTAGTGATCGTCAACGCCGCGGCGGAATCAGAC
ATGCATGTATTCGTCGCCGGCTTGCTGAAAGGTATCCCTACACCTACACC
TACACCTACCTCTTATCACCTACCCCCACAAACCTATTCTAATCAATCTC
TACAGCGAAGTCCCAATCCCAAAAACACTACCTCTACCGCACAGCCGCCG
CCTTCGTCTCCACATCCCTCGGCATCCGTCCCCAAGCTCCCCTAACAGCC
GCCTCCTTCCCCGAACCCCAAATCCAGACCGGAACCCTCATTATCGCCGG
CTCCTACGTCCCCAAAACCACCGCGCAGCTTAACCACCTAATAACCAAAC
ACGGCCCCCCGGGCACAAACACCCTTTCCATAGTCGAGCTCGACGTCGAA
GACATCATCGCTACCACCACATCCTCATCCTCATCTCTGGACCCCATAAT
CGACCAGACCGTCTCCTCCGTCGAATCATCCCTTCTCTCGGGAAAAGACG
CATTGGTCATGACAAGTCGCAAACTCATCACGGGAGGTGACGAACTCTCC
AGTCTAGCGATAGGGGGCCGCGTGGCGGAGGCGTTGGTGGAGGTGCTGAA
GCGGGTGAAGGTGCGGCCGAGGGTTGTTATTGCCAAGGGCGGCATTACTT
CGTCTGATGCGGCGACGAAGGGGTTGGGGATTAAGCGCGCGATGATTCTG
GGGCAGGCGGCGCCTGGGGTGCCGCTTTGGAGGTGTGATGAGGAGACGGC
CAGGCATAGGGGTGTGCCGTTTGTGGTTTTTCCGGGGAATGTGGGAGGGG
TAGAGACGTTGGGGGAGATTGTTGAGGGGTGGAGGTGA back to topCoding sequence (CDS) from alignment at ch7:5085509..5087046+ >KJC3_011046-T1 ID=KJC3_011046-T1|Name=KJC3_011046-T1|organism=Aspergillus niger KJC3|type=CDS|length=2928bp|location=Sequence derived from alignment at ch7:5085509..5087046+ (Aspergillus niger KJC3)
ATGACCACTCCCCGCGAATACCCCGTGGTGCCCCGCGAGAGCACCCTATC
CCAGCTGCCCCCCGAATCCTCCCTCAACGCCCAAGACCAAATCTCCGAGC
TCCTCTCCACCGCATCACTTAGTCGTCTCGTCGTACTCGACGACGACCCA
ACCGGCACCCAGACATGCCATGACATCGCCGTCCTCACAGTCTGGGACAT
CCCGACTCTCCAAGCCGAACTGCAACAACCCTCTCCGGGCTTCTTCATCC
TCACCAACTCGCGCGCCCTGCCCCCCCTGGAGGCCGAGAAGCTAATCCGC
ACCATCTGCGAAAACGTCCAGCAGGCCGCCAACCTCGCTGGAACCACCGT
GGACATCGTCCTACGCGGCGACAGCACTCTCCGCGGACACTTCCCCCTCG
AAGCCGATGTCGCGCAGTCCGTCTTCGGTCCCGCGGACGCCATCATCCTC
GCCCCGTTCTTCTTCCAGGGCGGTCGCCTCACCATCAACGACATCCACTA
CGTCGCCGAAGGAGACAACCTCGTCCCAGCCGGCGCAACCCAGTTCGCCC
GCGACGCAACCTTCGGGTTTAAGAGCTCCAACCTCCATGACTACGTGCTC
GAGAAGGCGCCGGGACGGTTCACCCCGGAGCAAATTCACTCCATCACCAT
CGAGGACATTAGAGTCAATGGACCCAGCACCATCTGCGAGAAGCTCCTCG
CTTTGCCGAAGGGGAGCGTAGTGATCGTCAACGCCGCGGCGGAATCAGAC
ATGCATGTATTCGTCGCCGGCTTGCTGAAAGCGAAGTCCCAATCCCAAAA
ACACTACCTCTACCGCACAGCCGCCGCCTTCGTCTCCACATCCCTCGGCA
TCCGTCCCCAAGCTCCCCTAACAGCCGCCTCCTTCCCCGAACCCCAAATC
CAGACCGGAACCCTCATTATCGCCGGCTCCTACGTCCCCAAAACCACCGC
GCAGCTTAACCACCTAATAACCAAACACGGCCCCCCGGGCACAAACACCC
TTTCCATAGTCGAGCTCGACGTCGAAGACATCATCGCTACCACCACATCC
TCATCCTCATCTCTGGACCCCATAATCGACCAGACCGTCTCCTCCGTCGA
ATCATCCCTTCTCTCGGGAAAAGACGCATTGGTCATGACAAGTCGCAAAC
TCATCACGGGAGGTGACGAACTCTCCAGTCTAGCGATAGGGGGCCGCGTG
GCGGAGGCGTTGGTGGAGGTGCTGAAGCGGGTGAAGGTGCGGCCGAGGGT
TGTTATTGCCAAGGGCGGCATTACTTCGTCTGATGCGGCGACGAAGGGGT
TGGGGATTAAGCGCGCGATGATTCTGGGGCAGGCGGCGCCTGGGGTGCCG
CTTTGGAGGTGTGATGAGGAGACGGCCAGGCATAGGGGTGTGCCGTTTGT
GGTTTTTCCGGGGAATGTGGGAGGGGTAGAGACGTTGGGGGAGATTGTTG
AGGGGTGGAGGTGAATGACCACTCCCCGCGAATACCCCGTGGTGCCCCGC
GAGAGCACCCTATCCCAGCTGCCCCCCGAATCCTCCCTCAACGCCCAAGA
CCAAATCTCCGAGCTCCTCTCCACCGCATCACTTAGTCGTCTCGTCGTAC
TCGACGACGACCCAACCGGCACCCAGACATGCCATGACATCGCCGTCCTC
ACAGTCTGGGACATCCCGACTCTCCAAGCCGAACTGCAACAACCCTCTCC
GGGCTTCTTCATCCTCACCAACTCGCGCGCCCTGCCCCCCCTGGAGGCCG
AGAAGCTAATCCGCACCATCTGCGAAAACGTCCAGCAGGCCGCCAACCTC
GCTGGAACCACCGTGGACATCGTCCTACGCGGCGACAGCACTCTCCGCGG
ACACTTCCCCCTCGAAGCCGATGTCGCGCAGTCCGTCTTCGGTCCCGCGG
ACGCCATCATCCTCGCCCCGTTCTTCTTCCAGGGCGGTCGCCTCACCATC
AACGACATCCACTACGTCGCCGAAGGAGACAACCTCGTCCCAGCCGGCGC
AACCCAGTTCGCCCGCGACGCAACCTTCGGGTTTAAGAGCTCCAACCTCC
ATGACTACGTGCTCGAGAAGGCGCCGGGACGGTTCACCCCGGAGCAAATT
CACTCCATCACCATCGAGGACATTAGAGTCAATGGACCCAGCACCATCTG
CGAGAAGCTCCTCGCTTTGCCGAAGGGGAGCGTAGTGATCGTCAACGCCG
CGGCGGAATCAGACATGCATGTATTCGTCGCCGGCTTGCTGAAAGCGAAG
TCCCAATCCCAAAAACACTACCTCTACCGCACAGCCGCCGCCTTCGTCTC
CACATCCCTCGGCATCCGTCCCCAAGCTCCCCTAACAGCCGCCTCCTTCC
CCGAACCCCAAATCCAGACCGGAACCCTCATTATCGCCGGCTCCTACGTC
CCCAAAACCACCGCGCAGCTTAACCACCTAATAACCAAACACGGCCCCCC
GGGCACAAACACCCTTTCCATAGTCGAGCTCGACGTCGAAGACATCATCG
CTACCACCACATCCTCATCCTCATCTCTGGACCCCATAATCGACCAGACC
GTCTCCTCCGTCGAATCATCCCTTCTCTCGGGAAAAGACGCATTGGTCAT
GACAAGTCGCAAACTCATCACGGGAGGTGACGAACTCTCCAGTCTAGCGA
TAGGGGGCCGCGTGGCGGAGGCGTTGGTGGAGGTGCTGAAGCGGGTGAAG
GTGCGGCCGAGGGTTGTTATTGCCAAGGGCGGCATTACTTCGTCTGATGC
GGCGACGAAGGGGTTGGGGATTAAGCGCGCGATGATTCTGGGGCAGGCGG
CGCCTGGGGTGCCGCTTTGGAGGTGTGATGAGGAGACGGCCAGGCATAGG
GGTGTGCCGTTTGTGGTTTTTCCGGGGAATGTGGGAGGGGTAGAGACGTT
GGGGGAGATTGTTGAGGGGTGGAGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042213 |
| DBxref | InterPro:IPR010737 |
| DBxref | InterPro:IPR037051 |
| DBxref | InterPro:IPR031475 |
| DBxref | PFAM:PF07005 |
| DBxref | PFAM:PF17042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5085509..5087046 + |
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