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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5144138..5145684- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011070-T1 ID=KJC3_011070-T1|Name=KJC3_011070-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1547bp|location=Sequence derived from alignment at ch7:5144138..5145684- (Aspergillus niger KJC3)
GCTGGCTGAAGTTTGCGCCGGAACTTTTTCTCTCACGCCATGCGCTCAAG
CAGGTCTCTGCTTATGTTTCATCCCGCTATGTGCTTCGGCCGACGGCTGG
ACATTCTCTAACTTTCTGAAACACCAGGAAGTCTATCTGGTCGTTCGTGG
GCGCTGCTGCCGTTCTCTGCGTCAGACATACGCTGCCAGCACTGTCTCAT
GGTTCACCCCTCATCGTTGTCTATATTCGTACTTGTATAGCTTCCTACCT
TCGAAAGATGGATGGGATCGACGATTTGACAGCACTAAGCGATACGATGG
TCTACCGTCACGTACTCACGGTCTTTTCTCCTGTTATCCCGGCCTCTCTC
CGACGGCGGATCACTAGTTTATACCCATCAACGCATCGACCCGTGAGGTT
GGAGGCCAGCGATAGCGCCAGCGTCAAAGAAAATACAGCTGGTGAGGCCG
GAGGTGACTCGATGGTCTCAATGCGACAATCTTCCGAGTCAGGAGGGCTG
GAGTATGTGGCATCGATGCCTGATCTTTCGTCTGGGCCCACCTTTCAGCG
CCCCAGTACCGCGAGCAGTGCTAGCAATGGACTGGAATCATGCTTCTCGT
CTGTTGCTGAGAAGTCACAAGAACTCAGCGATATCTCTAGTATTCGAAGC
AGTAGATCTAGCGATGTCTTTAGTCCAATGGCTCCGAAATACGAAGCGGA
ATCCGGACTGCGATGGAATCGGATAGCGCCTGGTTCGTCTTGCCGCCTGT
CTTTGTCTCCGCTCAATTTAGGACAGACGAGATTTTTAGTACTAGTCTGG
CTGACAATATCCCAGCACTCAATCTCCTACAAAATGCCTGTCATGAAGCG
CAGCAGCGGCAGTGCGACAGTCGCTTGGCTCGGATGTTGTACGTCGATGC
CCTAGGCTACCTCCTCGATGGCCTCCCCGACGACATGAGCAGCCAAGAAA
CTATGACAATTCGGGATAACCTTCCTGCTGGAGTCAAGGGATCCTTGGCT
GCGCCTTCCGTGACTGATCCATCCGCGGCAGGGCTTCACAGTCTGCTTGC
AGAGGAAAATTCTCTACCCGAGCGATCTTACCTTCATCGACTGCTGTCGT
CCACTATCGTCTACTTCTTCATAATGCTGCAATTCCTCATGCCATACGTC
AAAATCCTCGTGTGTCATTTGTACCAATATGAGCGATCCCATCGGATTAC
GGAACGTGCCGTGACAAAGGTTCTGGTTGCGGCTGATAACTTTGGTAAAA
GAGGTATGGTTATAGGGGCTGCAGTTCTGAATTATAACGAAGGAAGAGTG
AGCGCAAATTTGATGGATCTTGCAGCCTGGTGGGTGACAAGCATTGCAGG
TGGCATTTATGAGGGATTTGCGGAGGGCATGACTATCATGGGAGTCACCC
GGTCGCATGTTGAGCTTGGGAAGGCTTTTGTGCAGGCTTCGCGGGGATGA
GGTACAATCTGAGCAAACTAGATTGGAGGTGCTGTATGTGTATCTTAAAC
ATAGAGATAGACTGTTATAATGTGACATGACTATTGCACAGTGAGTG back to topCoding sequence (CDS) from alignment at ch7:5144138..5145684- >KJC3_011070-T1 ID=KJC3_011070-T1|Name=KJC3_011070-T1|organism=Aspergillus niger KJC3|type=CDS|length=2220bp|location=Sequence derived from alignment at ch7:5144138..5145684- (Aspergillus niger KJC3)
CACTCAATCTCCTACAAAATGCCTGTCATGAAGCGCAGCAGCGGCAGTGC
GACAGTCGCTTGGCTCGGATGTTGTACGTCGATGCCCTAGGCTACCTCCT
CGATGGCCTCCCCGACGACATGAGCAGCCAAGAAACTATGACAATTCGGG
ATAACCTTCCTGCTGGAGTCAAGGGATCCTTGGCTGCGCCTTCCGTGACT
GATCCATCCGCGGCAGGGCTTCACAGTCTGCTTGCAGAGGAAAATTCTCT
ACCCGAGCGATCTTACCTTCATCGACTGCTGTCGTCCACTATCGTCTACT
TCTTCATAATGCTGCAATTCCTCATGCCATACGTCAAAATCCTCGTGTGT
CATTTGTACCAATATGAGCGATCCCATCGGATTACGGAACGTGCCGTGAC
AAAGGTTCTGGTTGCGGCTGATAACTTTGGTAAAAGAGGTATGGTTATAG
GGGCTGCAGTTCTGAATTATAACGAAGGAAGAGTGAGCGCAAATTTGATG
GATCTTGCAGCCTGGTGGGTGACAAGCATTGCAGGTGGCATTTATGAGGG
ATTTGCGGAGGGCATGACTATCATGGGAGTCACCCGGTCGCATGTTGAGC
TTGGGAAGGCTTTTGTGCAGGCTTCGCGGGGATGAATGGATGGGATCGAC
GATTTGACAGCACTAAGCGATACGATGGTCTACCGTCACGTACTCACGGT
CTTTTCTCCTGTTATCCCGGCCTCTCTCCGACGGCGGATCACTAGTTTAT
ACCCATCAACGCATCGACCCGTGAGGTTGGAGGCCAGCGATAGCGCCAGC
GTCAAAGAAAATACAGCTGGTGAGGCCGGAGGTGACTCGATGGTCTCAAT
GCGACAATCTTCCGAGTCAGGAGGGCTGGAGTATGTGGCATCGATGCCTG
ATCTTTCGTCTGGGCCCACCTTTCAGCGCCCCAGTACCGCGAGCAGTGCT
AGCAATGGACTGGAATCATGCTTCTCGTCTGTTGCTGAGAAGTCACAAGA
ACTCAGCGATATCTCTAGTATTCGAAGCAGTAGATCTAGCGATGTCTTTA
GTCCAATGGCTCCGAAATACGAAGCGGAATCCGGACTGCGATGGAATCGG
ATAGCGCCTGCACTCAATCTCCTACAAAATGCCTGTCATGAAGCGCAGCA
GCGGCAGTGCGACAGTCGCTTGGCTCGGATGTTGTACGTCGATGCCCTAG
GCTACCTCCTCGATGGCCTCCCCGACGACATGAGCAGCCAAGAAACTATG
ACAATTCGGGATAACCTTCCTGCTGGAGTCAAGGGATCCTTGGCTGCGCC
TTCCGTGACTGATCCATCCGCGGCAGGGCTTCACAGTCTGCTTGCAGAGG
AAAATTCTCTACCCGAGCGATCTTACCTTCATCGACTGCTGTCGTCCACT
ATCGTCTACTTCTTCATAATGCTGCAATTCCTCATGCCATACGTCAAAAT
CCTCGTGTGTCATTTGTACCAATATGAGCGATCCCATCGGATTACGGAAC
GTGCCGTGACAAAGGTTCTGGTTGCGGCTGATAACTTTGGTAAAAGAGGT
ATGGTTATAGGGGCTGCAGTTCTGAATTATAACGAAGGAAGAGTGAGCGC
AAATTTGATGGATCTTGCAGCCTGGTGGGTGACAAGCATTGCAGGTGGCA
TTTATGAGGGATTTGCGGAGGGCATGACTATCATGGGAGTCACCCGGTCG
CATGTTGAGCTTGGGAAGGCTTTTGTGCAGGCTTCGCGGGGATGAATGGA
TGGGATCGACGATTTGACAGCACTAAGCGATACGATGGTCTACCGTCACG
TACTCACGGTCTTTTCTCCTGTTATCCCGGCCTCTCTCCGACGGCGGATC
ACTAGTTTATACCCATCAACGCATCGACCCGTGAGGTTGGAGGCCAGCGA
TAGCGCCAGCGTCAAAGAAAATACAGCTGGTGAGGCCGGAGGTGACTCGA
TGGTCTCAATGCGACAATCTTCCGAGTCAGGAGGGCTGGAGTATGTGGCA
TCGATGCCTGATCTTTCGTCTGGGCCCACCTTTCAGCGCCCCAGTACCGC
GAGCAGTGCTAGCAATGGACTGGAATCATGCTTCTCGTCTGTTGCTGAGA
AGTCACAAGAACTCAGCGATATCTCTAGTATTCGAAGCAGTAGATCTAGC
GATGTCTTTAGTCCAATGGCTCCGAAATACGAAGCGGAATCCGGACTGCG
ATGGAATCGGATAGCGCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011070-T1.utr3p1 | KJC3_011070-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011070-T1.utr5p1 | KJC3_011070-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5144138..5145684 - |
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