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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5155573..5157649- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011074-T1 ID=KJC3_011074-T1|Name=KJC3_011074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2077bp|location=Sequence derived from alignment at ch7:5155573..5157649- (Aspergillus niger KJC3)
CATCACTCTCTTGACACTATTCCAGCATCTTCTTCATGCAGAGATCCTCC
TATTTCGATAACATACAATGAGATAATCCCGCGAAGAATGCGATACATCC
CGATTCACCTTAGCCTTTCCACAATCCTCCTCGAGATCCTCAATGTCCGC
CCCAATGACCCCATTCTCCGCTGCTTCCCGGACAACGATCTCGACACTCT
TCACGACCATCTTCTCGGCGATCCCGACGGCGCAATCAAGCTAGCCGACT
CCAAGCTCCGCGTATTCCCTTTCAAAGATGTGGACGTATGCTGGCGCCGC
TATTACACCGACGCATGCTTATTGAAAGCATGTCTGACGATCGCCGAAAA
CTGCGGGTTTCCGCACCGCGAACGCAACGGACATCCAGTTCTCCCTCCCT
GTCCTGCTCCTGCTCCTCCTTCACATCCCGGTTCCACGGCCCTGACGCGC
AGGCAATACATACTGAGGATTATCCAGGATTCCTGCTCCCTGAAGGGGCT
GATTGACATCGACCCGGATGCAGAATGGCTCACGCCTACAATACACATGC
TCGACAAGGCATTGATAATGACAGGTGCACCACAGAGGGAGAAGTGGGTC
TTAAGTTTGATTTATGCGTTGCAGGGTTCGTGTCCGACGACCAAGTGGAA
CAACCGAACTGAATATGAATTTCGTGATGAATTGGACCCCGACGAACTTG
CTACTCCGCTCTTCTCTGACGATACTGCGCCGACGCCTGAGATTCGCTTC
CCTATACCACGAGTATCCAAACTACCGCAGTGGGGTACGTCGCCCACGTC
GCCGAGTTTCCGTAATCATGCGCGCCAGAAGAAAACACCGCTTGTCATAA
CGGATGCCGTGGCTGATTGGCCGGCTATATCGACAGGGTCGTGGGCGTCC
CGGGAGTTCTGGATGCATCGCACCTTTGACGGACAGAGACTTGTTCCCGT
GGAGATTGGGAGGTCGTATACAGATGAGGATTGGGGGCAGCGGTTAATGT
CCTTCAATGACTTTGTGGAGAAGTATCTCAGTCGGGATAGACACAGCGAT
GATGCTGGTCCAACGGGGTATTTGGCGCAGCATGATCTGTTTCTTCACAT
ACCGACCTTATATAAGGATATTATGCACCCGGATTATATGTACATCGATG
CACCCAAGGCCGAACCTGGCACGCCAGCCTACATCAGACTGCAGAGAGAG
GAAGAGGAGCGGAGACGGAAATTGGGAGAAGAAGTCATCCCAGTTCAGGA
GCAGGAAGAGGAACCCAAATACGGCGACGACTCCTCCGACTCCTCCTCGT
CGACATCCTGGCACGAATCCGACTTCGACGGCCCGCACCTCAACATCTGG
ATGGGTCCCTCATGGACGATATCCCCACTCCACTTCGACACATACCATAA
CATCTACGTGCAAGTAGTAGGCGAGAAATACTTTCGACTATATTCACCTC
ACACACCACTTTCGAAGATCCACCCGAAGGGGAAAGAACCCGTCGTTAGA
CGAAGACCCGAGGGCGGGGAAGACCCCCTCCAGTACACTCACCACCAACA
CTACCGACAAGAACCCGAACTTGTAGACATGTCCAATACCTCGCAGGTTG
ACGTCGCTGCTATTGAGATGTCCCCTGCTGAGGCGGACCATTGGGAGGAG
CTGTGGCCTGGGTTCATGGATGCGGAGTACGTCGAGACGGTGCTTAAGCC
GGGGGATATGTTGTATATCCCCATTGGGTGGTGGCATTACGTGCGGAGTA
TCAAGGGTGGGATTGGTGTTAGTTTCTGGTGGAATGGGTGACAGATGGAT
TATAGCATTGGTGGCATAAGTTGTATGATAGGTTTTGGTTGTATACTGGG
CGACTGAGCTCGGTTGTGAAGCGGTCAGGGACATACTCAAATGTGTTCTG
TTTTCGAAAGCGATTGCCCTTTTGGGTGATTGCGTGCTTGGGTGTAGTAA
CATGTGTATCTACCATACTGTACTGTAAGTGTCGATTGTCTACCGTTCAC
AGAAGCTTGCATTGCTTTGAAGCTGACATCATGTGATTGTAGCCAAAAAG
GTACTTTAAAAGCCATGAATGCATACT back to topCoding sequence (CDS) from alignment at ch7:5155573..5157649- >KJC3_011074-T1 ID=KJC3_011074-T1|Name=KJC3_011074-T1|organism=Aspergillus niger KJC3|type=CDS|length=1704bp|location=Sequence derived from alignment at ch7:5155573..5157649- (Aspergillus niger KJC3)
ATGCGATACATCCCGATTCACCTTAGCCTTTCCACAATCCTCCTCGAGAT
CCTCAATGTCCGCCCCAATGACCCCATTCTCCGCTGCTTCCCGGACAACG
ATCTCGACACTCTTCACGACCATCTTCTCGGCGATCCCGACGGCGCAATC
AAGCTAGCCGACTCCAAGCTCCGCGTATTCCCTTTCAAAGATGTGGACGT
ATGCTGGCGCCGCTATTACACCGACGCATGCTTATTGAAAGCATGTCTGA
CGATCGCCGAAAACTGCGGGTTTCCGCACCGCGAACGCAACGGACATCCA
GTTCTCCCTCCCTGTCCTGCTCCTGCTCCTCCTTCACATCCCGGTTCCAC
GGCCCTGACGCGCAGGCAATACATACTGAGGATTATCCAGGATTCCTGCT
CCCTGAAGGGGCTGATTGACATCGACCCGGATGCAGAATGGCTCACGCCT
ACAATACACATGCTCGACAAGGCATTGATAATGACAGGTGCACCACAGAG
GGAGAAGTGGGTCTTAAGTTTGATTTATGCGTTGCAGGGTTCGTGTCCGA
CGACCAAGTGGAACAACCGAACTGAATATGAATTTCGTGATGAATTGGAC
CCCGACGAACTTGCTACTCCGCTCTTCTCTGACGATACTGCGCCGACGCC
TGAGATTCGCTTCCCTATACCACGAGTATCCAAACTACCGCAGTGGGGTA
CGTCGCCCACGTCGCCGAGTTTCCGTAATCATGCGCGCCAGAAGAAAACA
CCGCTTGTCATAACGGATGCCGTGGCTGATTGGCCGGCTATATCGACAGG
GTCGTGGGCGTCCCGGGAGTTCTGGATGCATCGCACCTTTGACGGACAGA
GACTTGTTCCCGTGGAGATTGGGAGGTCGTATACAGATGAGGATTGGGGG
CAGCGGTTAATGTCCTTCAATGACTTTGTGGAGAAGTATCTCAGTCGGGA
TAGACACAGCGATGATGCTGGTCCAACGGGGTATTTGGCGCAGCATGATC
TGTTTCTTCACATACCGACCTTATATAAGGATATTATGCACCCGGATTAT
ATGTACATCGATGCACCCAAGGCCGAACCTGGCACGCCAGCCTACATCAG
ACTGCAGAGAGAGGAAGAGGAGCGGAGACGGAAATTGGGAGAAGAAGTCA
TCCCAGTTCAGGAGCAGGAAGAGGAACCCAAATACGGCGACGACTCCTCC
GACTCCTCCTCGTCGACATCCTGGCACGAATCCGACTTCGACGGCCCGCA
CCTCAACATCTGGATGGGTCCCTCATGGACGATATCCCCACTCCACTTCG
ACACATACCATAACATCTACGTGCAAGTAGTAGGCGAGAAATACTTTCGA
CTATATTCACCTCACACACCACTTTCGAAGATCCACCCGAAGGGGAAAGA
ACCCGTCGTTAGACGAAGACCCGAGGGCGGGGAAGACCCCCTCCAGTACA
CTCACCACCAACACTACCGACAAGAACCCGAACTTGTAGACATGTCCAAT
ACCTCGCAGGTTGACGTCGCTGCTATTGAGATGTCCCCTGCTGAGGCGGA
CCATTGGGAGGAGCTGTGGCCTGGGTTCATGGATGCGGAGTACGTCGAGA
CGGTGCTTAAGCCGGGGGATATGTTGTATATCCCCATTGGGTGGTGGCAT
TACGTGCGGAGTATCAAGGGTGGGATTGGTGTTAGTTTCTGGTGGAATGG
GTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011074-T1.utr5p1 | KJC3_011074-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041667 |
| DBxref | InterPro:IPR003347 |
| DBxref | PFAM:PF13621 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5155573..5157649 - |
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