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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5157816..5159852- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011075-T1 ID=KJC3_011075-T1|Name=KJC3_011075-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2037bp|location=Sequence derived from alignment at ch7:5157816..5159852- (Aspergillus niger KJC3)
ACAAGCTATTCAGTCCTGAAACAAGGCAGAGAAATGCATCGCAGCTGATT
AATATCACTCCAATTGCATAATTGCTACCCCCGTCAACCCAGAATGAGCT
ATAGCTAAGCTCCAGATTTTCAACATGGCAGCTCACAGAACATGGCTCCT
ACGCTCAATTCCTCGCATTCTCCCCCAACAGTCCGTCCGATTACGTCCTC
TAGCTAGGACACCGGCTGTCGCACTCAAAGTATGGTCTCAGCGATATAAT
AGCACCGAAGCCGAGTCCAAGCGATCGGAATACCAACAAACGCCGCTTCC
CGATCATGTCTCTGAACCCTCCCATCTGAACCCGTCCCCCGAAGATTATT
CGCGCTTCATTTTCCAGGATAAATGTCGCTCAACAATATATGCTGGTGCC
GGTGGACATGGGTGTGTCTCGTTTCTACGAGAGAAGTATGTCGAAGAGGG
TCCACCGAATGGCGGCGACGGAGGTAGTGGCGGGAGCATCTATATCCAAG
CCGTTGAAGGCATGACGAGTCTACATAAGCTGGCTCGCAGGGGAATCATA
AAGGCCGGTCGGGGGAAGAACGGACAGGGGAAAAGCAAAGGAGGCAAACG
AGGTAACGATGTCCTGCTCCAGGTTCCCGTCGGCACTGTCGTTCGCGAAG
TCGACCGTTACGATCCGGTCACGGAGGAAATAGTGCGTCGGAAACGTGAG
CGCAGGGAAGCCGCGGAAGCAGCAGCAGCAGCTGCTGCTGCTGCGGCAGA
GGAAGGCGCAGAAGAAAGGGATGAAATAGATGAGCTTGGGTTACCGTCTA
TACGGCATGATCGCTGGGTTCTTTATCCTGGCGCGAACCCGTCCGATTAC
CTGACTACGGTATTTCCGAAGAATCCGCCCCGAAGACAACATATCGCAGC
ACTCGAGCCGAAGGCACCGATCTACCTCGATCTCTCGCAACATATGGACA
AGCCGATCTTGCTGGCTGCTGGAGGTGTCGGTGGCTTGGGTAATCCACAC
TTTGTGACTCGCAATATGAACCGGCCTACGTTCGCATCCAGAGGTGAGGG
CGGCATGCGCCTGGAGCTTGAATTCGAGCTGAAGCTGCTTGCGGATGTTG
GTCTTGTCGGAAAGCCAAATGCGGGAAAAAGTACATTGCTTCGGTCATTG
ACCAACAGTCGCACCCGGGTCGGAAACTGGGAGTTCACGACGCTTTCTCC
CAATATTGGTACGGTAGTCATCGACAATCATAAAGGGCGACCCTTGGTGG
AGTCCAAAGGAAAGGCCCGGCGGACGAACTTCACCATTGCCGATATTCCA
GGTTTGATCGAGGATGCTCATCTGGATAAAGGCCTTGGCCTAGGCTTCCT
CCGGCATATTGAACGCGCTGGTATTCTGGCGTTTGTGGTTGATCTCAGCG
CAGGTGACCCTGTGCAAGGGCTGAAGAATCTCTGGCATGAACTGGGAGAG
TATGAGCGCGTCCGGGACGCTGAGGAGGCGATGAAAGTTGAGGGAGATGA
TTTAACCTGGACCCCGCCAACTCATGGTCTTCCTGAACTCCGATCCGAAA
GTGCAATTGGTGAGCTCAACGAGGTTGCGTCGAAAGCTCATGACGAACTC
CCCGCTTTGAATCTTCCTCCAATTCACACCAAGCCGTGGTTTGTAGTAGC
TACCAAGGCCGATCTCCCGGAGACCCAAGAACGCTTCAAGACACTGCGTG
ACTATCTTGCCGCTGTTAAGAAGGGCGAAGAGGAGCATCCGGGCGGACAT
CCCAATGGATGGAGAGAAAAGGTCTGCGCGGTTCCTGTCAGTGCCATCAG
GGGCGAGGGAGTTGCAGGCATTCCAAAGCTTGTTGTGGAATTGCTGGACT
GAGCAATAGGAACCGGTATTCATACTACTACTAAATGTCATCAAAAAAGG
TGTATATATTGAGAGTTTGCAACATAGGGTCGGAGTTGATGGTCTGGAAC
TGGCGGTTGTAATAATAAGAGGAACATGTCCAAATAATGAGACAAATAGT
CTTTATGAATCAAATCTCACTTCTCATAGCCACCGAG back to topCoding sequence (CDS) from alignment at ch7:5157816..5159852- >KJC3_011075-T1 ID=KJC3_011075-T1|Name=KJC3_011075-T1|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch7:5157816..5159852- (Aspergillus niger KJC3)
ATGGCAGCTCACAGAACATGGCTCCTACGCTCAATTCCTCGCATTCTCCC
CCAACAGTCCGTCCGATTACGTCCTCTAGCTAGGACACCGGCTGTCGCAC
TCAAAGTATGGTCTCAGCGATATAATAGCACCGAAGCCGAGTCCAAGCGA
TCGGAATACCAACAAACGCCGCTTCCCGATCATGTCTCTGAACCCTCCCA
TCTGAACCCGTCCCCCGAAGATTATTCGCGCTTCATTTTCCAGGATAAAT
GTCGCTCAACAATATATGCTGGTGCCGGTGGACATGGGTGTGTCTCGTTT
CTACGAGAGAAGTATGTCGAAGAGGGTCCACCGAATGGCGGCGACGGAGG
TAGTGGCGGGAGCATCTATATCCAAGCCGTTGAAGGCATGACGAGTCTAC
ATAAGCTGGCTCGCAGGGGAATCATAAAGGCCGGTCGGGGGAAGAACGGA
CAGGGGAAAAGCAAAGGAGGCAAACGAGGTAACGATGTCCTGCTCCAGGT
TCCCGTCGGCACTGTCGTTCGCGAAGTCGACCGTTACGATCCGGTCACGG
AGGAAATAGTGCGTCGGAAACGTGAGCGCAGGGAAGCCGCGGAAGCAGCA
GCAGCAGCTGCTGCTGCTGCGGCAGAGGAAGGCGCAGAAGAAAGGGATGA
AATAGATGAGCTTGGGTTACCGTCTATACGGCATGATCGCTGGGTTCTTT
ATCCTGGCGCGAACCCGTCCGATTACCTGACTACGGTATTTCCGAAGAAT
CCGCCCCGAAGACAACATATCGCAGCACTCGAGCCGAAGGCACCGATCTA
CCTCGATCTCTCGCAACATATGGACAAGCCGATCTTGCTGGCTGCTGGAG
GTGTCGGTGGCTTGGGTAATCCACACTTTGTGACTCGCAATATGAACCGG
CCTACGTTCGCATCCAGAGGTGAGGGCGGCATGCGCCTGGAGCTTGAATT
CGAGCTGAAGCTGCTTGCGGATGTTGGTCTTGTCGGAAAGCCAAATGCGG
GAAAAAGTACATTGCTTCGGTCATTGACCAACAGTCGCACCCGGGTCGGA
AACTGGGAGTTCACGACGCTTTCTCCCAATATTGGTACGGTAGTCATCGA
CAATCATAAAGGGCGACCCTTGGTGGAGTCCAAAGGAAAGGCCCGGCGGA
CGAACTTCACCATTGCCGATATTCCAGGTTTGATCGAGGATGCTCATCTG
GATAAAGGCCTTGGCCTAGGCTTCCTCCGGCATATTGAACGCGCTGGTAT
TCTGGCGTTTGTGGTTGATCTCAGCGCAGGTGACCCTGTGCAAGGGCTGA
AGAATCTCTGGCATGAACTGGGAGAGTATGAGCGCGTCCGGGACGCTGAG
GAGGCGATGAAAGTTGAGGGAGATGATTTAACCTGGACCCCGCCAACTCA
TGGTCTTCCTGAACTCCGATCCGAAAGTGCAATTGGTGAGCTCAACGAGG
TTGCGTCGAAAGCTCATGACGAACTCCCCGCTTTGAATCTTCCTCCAATT
CACACCAAGCCGTGGTTTGTAGTAGCTACCAAGGCCGATCTCCCGGAGAC
CCAAGAACGCTTCAAGACACTGCGTGACTATCTTGCCGCTGTTAAGAAGG
GCGAAGAGGAGCATCCGGGCGGACATCCCAATGGATGGAGAGAAAAGGTC
TGCGCGGTTCCTGTCAGTGCCATCAGGGGCGAGGGAGTTGCAGGCATTCC
AAAGCTTGTTGTGGAATTGCTGGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011075-T1.utr3p1 | KJC3_011075-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011075-T1.utr5p1 | KJC3_011075-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR031167 |
| DBxref | InterPro:IPR036726 |
| DBxref | InterPro:IPR006169 |
| DBxref | InterPro:IPR006073 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF01018 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5157816..5159852 - |
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