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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5167038..5170073- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011077-T1 ID=KJC3_011077-T1|Name=KJC3_011077-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3036bp|location=Sequence derived from alignment at ch7:5167038..5170073- (Aspergillus niger KJC3)
GCCCAACTTACTTAGTACCGAGTTTGTAACAGTACGGGGTAATCGGTAAT
GAAGAGAGGAACAGGTAAAAACCCACCTCTGCATAAGGTAAATAGTACCA
TGCTGTGGATCTCATAGTGCCTGACTTAGCGCGGTTGAGATCTGGAGCCA
CGCGAGCCAACTGAGGGTCAAGAAGAGGGGGAGAAAAACAATGGAAGCTT
GCGAGCTGCAAGTGATCTTTTGACCATCATGATGAATAGGCCAGTGGGGC
GCTTTTGATACGGACGATCGACCATTAGCATCCGCCGCCCAGCAAGAAAG
ATGATGAAGGGCGGACAATAAACTCTGGCAGCCCAGAAAAAAAAGAAAAG
GCATTGCAGAGCAGCAGACGACGTCATGATACTTGGGACGGACAGTAACA
GGCAGCTGAACCCGCTGACTCTACCAGATCATCAAAGAAAGTGAAAAAGG
GGTTGAGGGGGAAAGATTTGGTACACCAAGCCAATGGGGAGGATCCGGAA
ATTCCGCCCACCGAGTCGAAACCCGATGGCCCCGTTGCTCTGGGCCAAGG
ATACATACGTATAGGAAGTAAGTAGTAGTTCAATCCGCCGGCGGCTTGAA
GGAGGTTGCCGGACGAAAGAGCATCTAAGGAAATCAAACCCCTACCCAAG
CTACCACGCGGAGAGACGCAACCCGAGAGCATGCGAACGAAGATAAGTCG
GGTCGGGTCTTCAAAGCCAATACGAGGGCTTCCTTAAGGATCCCGATTGG
GCTATTTAGGGATTTTCGCGACAACGTGCTGTCGCAGGATTAATTTCGAC
TTGGATGCATTGCTTGCATCCAGTAGGATGGAGCTTACCCCTCATTTCCC
TGACAAGCAAGACGACAACGGGCCTCCTTTGGGTTTCAAAGATTTGCTAG
GAGCCGTCAACCCAAACGGCCCGTGGTTTGGCGGTGTCTGCATGGCGTCC
GTTCAAAACCATGATACTGGACAGGCAATGGCCGAGTGGTCAGCGGTCTT
AGCTCGAGTGACCACGATCGTGTCCAGCTTGATAACCACTCGGACGTTTC
GGAGGAAAATAGGAAAACGGACGGTGAAATGTCATCGCGATGCGCCTAGT
CTCTTAGCAGATACATACATACATACTTGCTGCTGTACATCATGTGAGCA
TGACCCGTCGCAGCTGAATGAAGCACGGGCGAGTCTAAATTATTGGGTGG
ATCAAGAGGGGGGGCCCTGAAATGATTAGCAGCAGTTGACTACTCGTGCT
TGTAACCAGGTTAATTGCATGAGAGCTGGCGACTACTGTGCGGTCATAAT
TGGTAACCATGATGAGCTGTTGGTAGTATGGAGTACAGGAAGAGAGGGAA
AGAATGACGATGATTAGTGAGGAATACCGGTGTGTATGTGTGTGTGTGTG
TGTGTGGTGCCGTGCCCGCTGATGCCGCTGCCCTGCAGGTGCAATAACTT
TGTGCCAGCTGAGGGGGGGGGAAAAGGCGTCGGTGACTGCCCATTTCACC
ACTTGAATTGAAACCACCAGCAAAACAAAACAAAACAGAACAATAGAATT
CCGGCAGGAAGCGGTGAAGAGCCGAAAAGGAGGGGCTTGCAGGCTAACTT
GGGTACGGACCGCCTAAGCTGTTGGCCGATATCACCACTGCATCGTGATC
CTTGTGCCACCGAATGCGGGACAGACAGGCTTTGTTTGTCAACATCTGTC
AAAGATCCTGGCCGGTTTTACCCTACCTACTGCAGTCCTCGTGTGTCTTT
ATTTTTATTTTGTATTTTATTTTTCCTTAAAGAAATCTTTGCGATAGGTC
AGCTGCCCCCTTTCCCGGGGGGGTGGAAAAGGAAGAATAACGCTCTGCTG
TGCTTTGGGCAGAAATCCAAGCGCGGGCAGTCGCTGATGCTTGCTTGAAT
CATGCCTCGGAGCAGCAGCAGCCCTGGTCCGCCTTGCAGGGAGCAACGAG
AAACTTACGGTGAGCGATCCAACATTACACACACAAGCTGATCCAATACA
CAGCCACGGGTCGCCAGGAGGGCAGCTGGCAACAACCTTCGGGAAGCAGT
TTTCCGTTTTGACAGCTGGGCTAAGATCAACTCCTCATGCAAGGTCGATT
GATTGATTGCTGCTACTGGTGGCATACACCCACGCCTCTTGTTATCGCAC
CGGCGGGGCATTGGGCTGCCCCGCGGTACATCGCTTTTGCTGCAGTGGAT
GGTTGGGAGAGGTGTCAGAGCCAGGGTTGGAGGAAAGGAACCGTAACATC
AGCTCATTTATCCGATAATCGTCCTTCTTCGGTTTGCAGGGATGTTAGAG
GCTGTCCTGGAGGCTGTCTATCCCATCAAGCAGCATATCGCGTCTTACGT
TAGTGCTCTTGCCTGTCTGATCACAACGACAAAACATCAATACTATGCTC
TCCTATCGCCTAACCCACCTAATCTCCGATTCGTTCAATATCCTGCAACG
ACATTCAGCATTGAGCATCTTTATCACTGGCATGGGACTCTATCTAGTAG
TCATCGATGCATGGCTTACTGGCGCATGACGTTGTCTCTATCAGCAGGTC
TCTGCCCCATACCTTTCCAGCCTCTCTTTTCTTTTTTCCTCCCCTAACCC
TTTAGTTTCGCCGGGCGATTTTTCACGTTGCCGCGGTTCATTCCTCTGAC
CCAACACATGTCTCAAGGCCTCAACGAATCCCATTGACTTTTCTCCGTAT
GGAGTATTTGAGTAGTACTCTGTGGTGTACTCCCAACTCTCGGGATCCAC
GGCCCACCTGAAATCAGCTTTGGAGGGACAAGCCACCCGCTTCCGGTCTG
CGGTGGATCGTTTTACAGGCGCAGTTCCCGCGCCAGAGTGTCGGGTCCGC
CTCTTGGAAATTCTATACTGTGGCGGATGAGACTCGGAGTGTCTTTTCCA
GTCCCACTATTCTGATTTCTGATTCCTTTTTCTTACCGATCATCCAATCC
TTAATTAGGCCATGTTCATTATTGCCTTCCATCATGGTTGAATTACCCGA
TAGTTACCATAAAGTCACTGACTACTAGTTTGTTAT back to topCoding sequence (CDS) from alignment at ch7:5167038..5170073- >KJC3_011077-T1 ID=KJC3_011077-T1|Name=KJC3_011077-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch7:5167038..5170073- (Aspergillus niger KJC3)
TACTCTGTGGTGTACTCCCAACTCTCGGGATCCACGGCCCACCTGAAATC
AGCTTTGGAGGGACAAGCCACCCGCTTCCGGTCTGCGGTGGATCGTTTTA
CAGGCGCAGTTCCCGCGCCAGAGTGTCGGGTCCGCCTCTTGGAAATTCTA
TACTGTGGCGGATGAGACTCGGAGTGTCTTTTCCAGTCCCACTATTCTGA
ATGTTAGAGGCTGTCCTGGAGGCTGTCTATCCCATCAAGCAGCATATCGC
GTCTTACGTTAGTGCTCTTGCCTGTCTGATCACAACGACAAAACATCAAT
ACTATGCTCTCCTATCGCCTAACCCACCTAATCTCCGATTCGTTCAATAT
CCTGCAACGACATTCAGCATTGAGCATCTTTATCACTGGCATGGGACTCT
ATCTAGTAGTCATCGATGCATGGCTTACTGGCGCATGACGTTGTCTCTAT
CAGCAGTACTCTGTGGTGTACTCCCAACTCTCGGGATCCACGGCCCACCT
GAAATCAGCTTTGGAGGGACAAGCCACCCGCTTCCGGTCTGCGGTGGATC
GTTTTACAGGCGCAGTTCCCGCGCCAGAGTGTCGGGTCCGCCTCTTGGAA
ATTCTATACTGTGGCGGATGAGACTCGGAGTGTCTTTTCCAGTCCCACTA
TTCTGAATGTTAGAGGCTGTCCTGGAGGCTGTCTATCCCATCAAGCAGCA
TATCGCGTCTTACGTTAGTGCTCTTGCCTGTCTGATCACAACGACAAAAC
ATCAATACTATGCTCTCCTATCGCCTAACCCACCTAATCTCCGATTCGTT
CAATATCCTGCAACGACATTCAGCATTGAGCATCTTTATCACTGGCATGG
GACTCTATCTAGTAGTCATCGATGCATGGCTTACTGGCGCATGACGTTGT
CTCTATCAGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011077-T1.utr3p1 | KJC3_011077-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011077-T1.utr5p1 | KJC3_011077-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5167038..5170073 - |
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