You are here

Home

KJC3_011078-T1, KJC3_011078-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011078-T1
Unique NameKJC3_011078-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5173979..5176874+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011078-T1 ID=KJC3_011078-T1|Name=KJC3_011078-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2896bp|location=Sequence derived from alignment at ch7:5173979..5176874+ (Aspergillus niger KJC3)
ACTTGCCTCCGTGGACTGCAGCGCTTTCTTCTCCTTCTCTTCTCCATCTG
TTGCACTCCGCTACTATATCTGCTACCTTAGTACTACTTAGCCATTAGCC
CTACTATCCTACTACCTCCACCCGCCAACCCATCATTATTGCCCTTGCAC
ACCCTCAATTGAACGACAACGAACCAGCCCTTGGATTTCTATTCTTCTCC
TGCTTCTAACTTTGCCTCCCTGTGATTATCTTTGATCACCGTTGGGGTTC
CTCACCACTCAAAGTTTGCGTCATTGGATTCCCTTGCAGTTACACAGTCT
AGCCGTTTCTCGGGAACGGAAGCACGGAAAATAAAATCCCAAAAGATTAA
AAGGATTTGCAGCATCGATTGACGACAAGGGGGTTAGAAATGTTGAACCC
CCTTTAACAAACCGAGTCCTCTTGTCTTCAGTCCAGCGATCTTATCATCA
TAACATTCCCTCCCTTCGGTTACAGCGGAGATTCCAGCCGAAGACACATT
CCCCGAAATCATTGGCCATTGGCCTCGCATATTGTCTTGCTCTATATTAT
TGCAAGAGACGCAAGCCGATATCGCCATCCGTGTTTGATCTCGAAGACCT
CACGCGAACAATAACAACAACAAAAACAACAACAACAACAATCCCCGATA
GTTCTTCATTCTGTTGAGAGTGAACCAAGTGGGTGACCGCTCAACCAACA
TCATGTTCAAACGACCGTCATGTTTACAAGGCCGGCGGCATGGTGAGGGC
AACGGTGATTGGGCCGCCTTCCCTGTCCGCCAGCTCTTTGTGCTAGGTAT
GTTTTTTTGACTAGTACTGGACTGACTATTGTGACAATCCCTTTGCGCCC
AATTCCCAACCATGATCGTGCATATGGCAAATAGGAATTTGTTTAGCCTC
GGTTCATTGCTTTGTTTTCTGTCAATCACCTTTTGTTTTCTATTTTACCT
TTCTGTTTGGGTACCTGATACCTGTGCACACATACACCCCTCTTTCTGCT
ATTATTACTATTACTACTGCATGCTCCTTTCCCCGCGCAATGTTAGACCA
GTACTATTGGCCGCATCAAATGGAGACTGACAGTGATCCCAGCACTATGC
CGCATCTGCGAACCAATCGCATTCATGTCCATATTCCCCTATGTTTACCA
GATGGTCGAATCATTCCATGTGACGGATAACGACCGCAAGATCGCCTTGT
ATGCTGGAATGATTACATCGGCCTTCACCTTTGCAGAGTTCTCCGCAGGC
ATGTTCTGGGGGCGGATGAGTGACAAGATTGGCAGAAAGCCTGTCCTCAT
CATGGGCTTAATTGGGACTGCCATCAGTATGGTCGTTTTTGGGTTCGCTC
CCAACTTGCCAACTGCCATGATCGCCCGGGCACTGGGAGGCCTTCTGAAC
GGCAACATTGGCGTGCTTCAAACTACCGTTGCAGAGATTGTCACTGTTAA
GGAGCACCAACCCCGGGCCTATTCCATCATGCCGTTCGTCTGGTGCCTTG
GGTCGATCATCGGGCCCGCTATGGGTGGTGCGTTGGCACAACCATGCGAC
AATTATCCCGGATTATTTCAGCGTGACACCATCTTCGATCGCTTTCCGTT
TCTGCTGCCCAACCTGGTCTGCGTTGTCGTCTTAGTGTCCGGAATCGTTG
TTGGCCTGTTGTTCCTGGAGGAGACCCATCCGGAGAAGAAGCACCGCCGC
GATCCCGGCCTGGCGTTGGGCAATTGGCTCGTTGCGAAAGTCTGGGGTTC
TCCCGAACCTATTCCCGAGCCCACGGACGCCAAAGCGGGATTGGCCGGAG
AGGAGGAGGAGGAGGAGTACTACGACTACGAGGATGTCCCTCCGCCAGAG
TACAGGAGCACGGAAAGTTCGCCTCGTCTGGGCCCGATGAAGGAATCGGA
CAACCTGTCTGCGGATGACGACATTGAGGGGCAGATGAAGGGCGAGCCGT
GCGCAACCCCCAAGGCATTCACCAAACAAGTCATCTTCAACATCATTGCC
TATGGCATTCTTGCATAGTAAGTCCCCTCTCGTTCCCCACTTCTTCCCCG
CCGTTCTTCAGACGCTGACCTTTACACAACAGCCATAGTGTTTCCTTCGA
CCAACTCATGCCCGTCTTCTTGAGCACTCCCAAGTCCGACGACGATGTCG
TGCTCCCCTTCAAGTTCACTGGTGGCTTGGGACTGGCTACGAGTAAAATC
GGGTTCATGCTGGCGGTTCAAGGCGTTTATTCCATGATCGCACAGCTGTG
GCTGTTCCCGTTTGTTGTTCGTCACTTTGGAACACTGAGAGTTTTCCGCT
TCGTGTTGCTTGTTTGGCCCCCTCTCTACCTCATGGTCCCTTACCTTATT
CTCCTGCCCGAACAGCTGCAAACCGCCGCGGCCTACGTCGCTTTGATCAG
CAAAATCACGCTGCACGTCATCGCATTCCCTGCTACCGCTATTCTCCTCG
CCAACGCTGCTCCGTCTTCCAGAGTCCTCGGTTCCATCAACGGCGCGGCC
GCCTCGACAGCTAGCTTGAGCCGCGCTTTCGGCCCAACGGTTACTGGCTT
GCTTCATTCCAAGGGTCTCGAAAGTGGATACTCCGTGCTAGCCTGGTGGG
CTTGTGGAATAGTATGCATCCTTGGCGCCATCGAGAGCTTTTGGATGGAG
GAATCGGAGCGAGACAAGGACGTGGAGAAGAAGGCCGAATGCGATGGCCC
AACTTCGAACCGCGACTCGCTGCGGGGTTCCTTCACTGCAGGCAAGGAAG
ACGGCTCTCCCGAGGAAGTGCGGAGACTGCTTTCTTCGGCGCGCACCAGC
ATCGATGACATGGACATTCCCAACGTGGACTCAATGCAAGCCAACCTGAA
CGTCACTTCCGAGCCCGAGCCCGACAAGTCCAAGTTCAGCCAATAG
back to top

Coding sequence (CDS) from alignment at ch7:5173979..5176874+

>KJC3_011078-T1 ID=KJC3_011078-T1|Name=KJC3_011078-T1|organism=Aspergillus niger KJC3|type=CDS|length=5499bp|location=Sequence derived from alignment at ch7:5173979..5176874+ (Aspergillus niger KJC3)
ATGTTCAAACGACCGTCATGTTTACAAGGCCGGCGGCATGGTGAGGGCAA
CGGTGATTGGGCCGCCTTCCCTGTCCGCCAGCTCTTTGTGCTAGCACTAT
GCCGCATCTGCGAACCAATCGCATTCATGTCCATATTCCCCTATGTTTAC
CAGATGGTCGAATCATTCCATGTGACGGATAACGACCGCAAGATCGCCTT
GTATGCTGGAATGATTACATCGGCCTTCACCTTTGCAGAGTTCTCCGCAG
GCATGTTCTGGGGGCGGATGAGTGACAAGATTGGCAGAAAGCCTGTCCTC
ATCATGGGCTTAATTGGGACTGCCATCAGTATGGTCGTTTTTGGGTTCGC
TCCCAACTTGCCAACTGCCATGATCGCCCGGGCACTGGGAGGCCTTCTGA
ACGGCAACATTGGCGTGCTTCAAACTACCGTTGCAGAGATTGTCACTGTT
AAGGAGCACCAACCCCGGGCCTATTCCATCATGCCGTTCGTCTGGTGCCT
TGGGTCGATCATCGGGCCCGCTATGGGTGGTGCGTTGGCACAACCATGCG
ACAATTATCCCGGATTATTTCAGCGTGACACCATCTTCGATCGCTTTCCG
TTTCTGCTGCCCAACCTGGTCTGCGTTGTCGTCTTAGTGTCCGGAATCGT
TGTTGGCCTGTTGTTCCTGGAGGAGACCCATCCGGAGAAGAAGCACCGCC
GCGATCCCGGCCTGGCGTTGGGCAATTGGCTCGTTGCGAAAGTCTGGGGT
TCTCCCGAACCTATTCCCGAGCCCACGGACGCCAAAGCGGGATTGGCCGG
AGAGGAGGAGGAGGAGGAGTACTACGACTACGAGGATGTCCCTCCGCCAG
AGTACAGGAGCACGGAAAGTTCGCCTCGTCTGGGCCCGATGAAGGAATCG
GACAACCTGTCTGCGGATGACGACATTGAGGGGCAGATGAAGGGCGAGCC
GTGCGCAACCCCCAAGGCATTCACCAAACAAGTCATCTTCAACATCATTG
CCTATGGCATTCTTGCATACCATAGTGTTTCCTTCGACCAACTCATGCCC
GTCTTCTTGAGCACTCCCAAGTCCGACGACGATGTCGTGCTCCCCTTCAA
GTTCACTGGTGGCTTGGGACTGGCTACGAGTAAAATCGGGTTCATGCTGG
CGGTTCAAGGCGTTTATTCCATGATCGCACAGCTGTGGCTGTTCCCGTTT
GTTGTTCGTCACTTTGGAACACTGAGAGTTTTCCGCTTCGTGTTGCTTGT
TTGGCCCCCTCTCTACCTCATGGTCCCTTACCTTATTCTCCTGCCCGAAC
AGCTGCAAACCGCCGCGGCCTACGTCGCTTTGATCAGCAAAATCACGCTG
CACGTCATCGCATTCCCTGCTACCGCTATTCTCCTCGCCAACGCTGCTCC
GTCTTCCAGAGTCCTCGGTTCCATCAACGGCGCGGCCGCCTCGACAGCTA
GCTTGAGCCGCGCTTTCGGCCCAACGGTTACTGGCTTGCTTCATTCCAAG
GGTCTCGAAAGTGGATACTCCGTGCTAGCCTGGTGGGCTTGTGGAATAGT
ATGCATCCTTGGCGCCATCGAGAGCTTTTGGATGGAGGAATCGGAGCGAG
ACAAGGACGTGGAGAAGAAGGCCGAATGCGATGGCCCAACTTCGAACCGC
GACTCGCTGCGGGGTTCCTTCACTGCAGGCAAGGAAGACGGCTCTCCCGA
GGAAGTGCGGAGACTGCTTTCTTCGGCGCGCACCAGCATCGATGACATGG
ACATTCCCAACGTGGACTCAATGCAAGCCAACCTGAACGTCACTTCCGAG
CCCGAGCCCGACAAGTCCAAGTTCAGCCAATAGATGTTCAAACGACCGTC
ATGTTTACAAGGCCGGCGGCATGGTGAGGGCAACGGTGATTGGGCCGCCT
TCCCTGTCCGCCAGCTCTTTGTGCTAGCACTATGCCGCATCTGCGAACCA
ATCGCATTCATGTCCATATTCCCCTATGTTTACCAGATGGTCGAATCATT
CCATGTGACGGATAACGACCGCAAGATCGCCTTGTATGCTGGAATGATTA
CATCGGCCTTCACCTTTGCAGAGTTCTCCGCAGGCATGTTCTGGGGGCGG
ATGAGTGACAAGATTGGCAGAAAGCCTGTCCTCATCATGGGCTTAATTGG
GACTGCCATCAGTATGGTCGTTTTTGGGTTCGCTCCCAACTTGCCAACTG
CCATGATCGCCCGGGCACTGGGAGGCCTTCTGAACGGCAACATTGGCGTG
CTTCAAACTACCGTTGCAGAGATTGTCACTGTTAAGGAGCACCAACCCCG
GGCCTATTCCATCATGCCGTTCGTCTGGTGCCTTGGGTCGATCATCGGGC
CCGCTATGGGTGGTGCGTTGGCACAACCATGCGACAATTATCCCGGATTA
TTTCAGCGTGACACCATCTTCGATCGCTTTCCGTTTCTGCTGCCCAACCT
GGTCTGCGTTGTCGTCTTAGTGTCCGGAATCGTTGTTGGCCTGTTGTTCC
TGGAGGAGACCCATCCGGAGAAGAAGCACCGCCGCGATCCCGGCCTGGCG
TTGGGCAATTGGCTCGTTGCGAAAGTCTGGGGTTCTCCCGAACCTATTCC
CGAGCCCACGGACGCCAAAGCGGGATTGGCCGGAGAGGAGGAGGAGGAGG
AGTACTACGACTACGAGGATGTCCCTCCGCCAGAGTACAGGAGCACGGAA
AGTTCGCCTCGTCTGGGCCCGATGAAGGAATCGGACAACCTGTCTGCGGA
TGACGACATTGAGGGGCAGATGAAGGGCGAGCCGTGCGCAACCCCCAAGG
CATTCACCAAACAAGTCATCTTCAACATCATTGCCTATGGCATTCTTGCA
TACCATAGTGTTTCCTTCGACCAACTCATGCCCGTCTTCTTGAGCACTCC
CAAGTCCGACGACGATGTCGTGCTCCCCTTCAAGTTCACTGGTGGCTTGG
GACTGGCTACGAGTAAAATCGGGTTCATGCTGGCGGTTCAAGGCGTTTAT
TCCATGATCGCACAGCTGTGGCTGTTCCCGTTTGTTGTTCGTCACTTTGG
AACACTGAGAGTTTTCCGCTTCGTGTTGCTTGTTTGGCCCCCTCTCTACC
TCATGGTCCCTTACCTTATTCTCCTGCCCGAACAGCTGCAAACCGCCGCG
GCCTACGTCGCTTTGATCAGCAAAATCACGCTGCACGTCATCGCATTCCC
TGCTACCGCTATTCTCCTCGCCAACGCTGCTCCGTCTTCCAGAGTCCTCG
GTTCCATCAACGGCGCGGCCGCCTCGACAGCTAGCTTGAGCCGCGCTTTC
GGCCCAACGGTTACTGGCTTGCTTCATTCCAAGGGTCTCGAAAGTGGATA
CTCCGTGCTAGCCTGGTGGGCTTGTGGAATAGTATGCATCCTTGGCGCCA
TCGAGAGCTTTTGGATGGAGGAATCGGAGCGAGACAAGGACGTGGAGAAG
AAGGCCGAATGCGATGGCCCAACTTCGAACCGCGACTCGCTGCGGGGTTC
CTTCACTGCAGGCAAGGAAGACGGCTCTCCCGAGGAAGTGCGGAGACTGC
TTTCTTCGGCGCGCACCAGCATCGATGACATGGACATTCCCAACGTGGAC
TCAATGCAAGCCAACCTGAACGTCACTTCCGAGCCCGAGCCCGACAAGTC
CAAGTTCAGCCAATAGATGTTCAAACGACCGTCATGTTTACAAGGCCGGC
GGCATGGTGAGGGCAACGGTGATTGGGCCGCCTTCCCTGTCCGCCAGCTC
TTTGTGCTAGCACTATGCCGCATCTGCGAACCAATCGCATTCATGTCCAT
ATTCCCCTATGTTTACCAGATGGTCGAATCATTCCATGTGACGGATAACG
ACCGCAAGATCGCCTTGTATGCTGGAATGATTACATCGGCCTTCACCTTT
GCAGAGTTCTCCGCAGGCATGTTCTGGGGGCGGATGAGTGACAAGATTGG
CAGAAAGCCTGTCCTCATCATGGGCTTAATTGGGACTGCCATCAGTATGG
TCGTTTTTGGGTTCGCTCCCAACTTGCCAACTGCCATGATCGCCCGGGCA
CTGGGAGGCCTTCTGAACGGCAACATTGGCGTGCTTCAAACTACCGTTGC
AGAGATTGTCACTGTTAAGGAGCACCAACCCCGGGCCTATTCCATCATGC
CGTTCGTCTGGTGCCTTGGGTCGATCATCGGGCCCGCTATGGGTGGTGCG
TTGGCACAACCATGCGACAATTATCCCGGATTATTTCAGCGTGACACCAT
CTTCGATCGCTTTCCGTTTCTGCTGCCCAACCTGGTCTGCGTTGTCGTCT
TAGTGTCCGGAATCGTTGTTGGCCTGTTGTTCCTGGAGGAGACCCATCCG
GAGAAGAAGCACCGCCGCGATCCCGGCCTGGCGTTGGGCAATTGGCTCGT
TGCGAAAGTCTGGGGTTCTCCCGAACCTATTCCCGAGCCCACGGACGCCA
AAGCGGGATTGGCCGGAGAGGAGGAGGAGGAGGAGTACTACGACTACGAG
GATGTCCCTCCGCCAGAGTACAGGAGCACGGAAAGTTCGCCTCGTCTGGG
CCCGATGAAGGAATCGGACAACCTGTCTGCGGATGACGACATTGAGGGGC
AGATGAAGGGCGAGCCGTGCGCAACCCCCAAGGCATTCACCAAACAAGTC
ATCTTCAACATCATTGCCTATGGCATTCTTGCATACCATAGTGTTTCCTT
CGACCAACTCATGCCCGTCTTCTTGAGCACTCCCAAGTCCGACGACGATG
TCGTGCTCCCCTTCAAGTTCACTGGTGGCTTGGGACTGGCTACGAGTAAA
ATCGGGTTCATGCTGGCGGTTCAAGGCGTTTATTCCATGATCGCACAGCT
GTGGCTGTTCCCGTTTGTTGTTCGTCACTTTGGAACACTGAGAGTTTTCC
GCTTCGTGTTGCTTGTTTGGCCCCCTCTCTACCTCATGGTCCCTTACCTT
ATTCTCCTGCCCGAACAGCTGCAAACCGCCGCGGCCTACGTCGCTTTGAT
CAGCAAAATCACGCTGCACGTCATCGCATTCCCTGCTACCGCTATTCTCC
TCGCCAACGCTGCTCCGTCTTCCAGAGTCCTCGGTTCCATCAACGGCGCG
GCCGCCTCGACAGCTAGCTTGAGCCGCGCTTTCGGCCCAACGGTTACTGG
CTTGCTTCATTCCAAGGGTCTCGAAAGTGGATACTCCGTGCTAGCCTGGT
GGGCTTGTGGAATAGTATGCATCCTTGGCGCCATCGAGAGCTTTTGGATG
GAGGAATCGGAGCGAGACAAGGACGTGGAGAAGAAGGCCGAATGCGATGG
CCCAACTTCGAACCGCGACTCGCTGCGGGGTTCCTTCACTGCAGGCAAGG
AAGACGGCTCTCCCGAGGAAGTGCGGAGACTGCTTTCTTCGGCGCGCACC
AGCATCGATGACATGGACATTCCCAACGTGGACTCAATGCAAGCCAACCT
GAACGTCACTTCCGAGCCCGAGCCCGACAAGTCCAAGTTCAGCCAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011078KJC3_011078Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011078-T1.utr5p1KJC3_011078-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011078-T1.exon1KJC3_011078-T1.exon1Aspergillus niger KJC3exon
KJC3_011078-T1.exon2KJC3_011078-T1.exon2Aspergillus niger KJC3exon
KJC3_011078-T1.exon3KJC3_011078-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011078-T1.cdsKJC3_011078-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011078-T1KJC3_011078-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5173979..5176874 +
Powered by Drupal