|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5187252..5187952- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011081-T1 ID=KJC3_011081-T1|Name=KJC3_011081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=701bp|location=Sequence derived from alignment at ch7:5187252..5187952- (Aspergillus niger KJC3)
ATGAAGTGGGATAACGCTTATGATCATAATGATTACGATGAAGGCTTATG
GCAGAAAGGCCTAGGATATTTCTGCTGGGCCATGTACATATCCAAGTACT
ACGAGGTGATGGACACGGTCATTCTGATCCTGAAGGGAAAGGAAAGCACC
TTCTTGCAAACATACCACCATTCCGGAGTCATGATCGGTTCGTGGGCGCT
CATGCGTTCGATATCACCTCACTGTCTGGTGGCTGCACTGTTAAATAGTG
GTGTTCATGCCTTAATGGTTCGTTAAATTCTCACCTCCAATTTCACAAAC
AAGCATCTAGTATATGTTATGTTTCAGATAATGTTGCTAACCACAGAGGG
TCGGTGTTTTTGCAGTACCTATACTACGCTCTCCAGACGCTCAAGATACC
AGTCCCAATGCGCCTCAAGCGGACATTGACGGCTGTACAGATTGCCCAGT
TCAGCATTGGGTATATCCTAAGTCTGTGCTATCTGTTCATTGCGTATGAT
TCACCGCATGCGCGCATCTCAACTGGCAGGGATGATGTTCTGAACGATGA
ATTGCGGCATACTGTGGTACCCTGTCTGCATACCCCAGGTCACTTGGCCG
TGCTACTGTTGGGGGGTCTGTATCTTGGGCCTTTGATTTATCTATTTGTA
CGGTTCTTTGTTCGTTCCTATCTGTCTGCAGCCAAGGGGAAGATGGATTG
A back to topCoding sequence (CDS) from alignment at ch7:5187252..5187952- >KJC3_011081-T1 ID=KJC3_011081-T1|Name=KJC3_011081-T1|organism=Aspergillus niger KJC3|type=CDS|length=1206bp|location=Sequence derived from alignment at ch7:5187252..5187952- (Aspergillus niger KJC3)
TACCTATACTACGCTCTCCAGACGCTCAAGATACCAGTCCCAATGCGCCT
CAAGCGGACATTGACGGCTGTACAGATTGCCCAGTTCAGCATTGGGTATA
TCCTAAGTCTGTGCTATCTGTTCATTGCGTATGATTCACCGCATGCGCGC
ATCTCAACTGGCAGGGATGATGTTCTGAACGATGAATTGCGGCATACTGT
GGTACCCTGTCTGCATACCCCAGGTCACTTGGCCGTGCTACTGTTGGGGG
GTCTGTATCTTGGGCCTTTGATTTATCTATTTGTACGGTTCTTTGTTCGT
TCCTATCTGTCTGCAGCCAAGGGGAAGATGGATTGAATGAAGTGGGATAA
CGCTTATGATCATAATGATTACGATGAAGGCTTATGGCAGAAAGGCCTAG
GATATTTCTGCTGGGCCATGTACATATCCAAGTACTACGAGGTGATGGAC
ACGGTCATTCTGATCCTGAAGGGAAAGGAAAGCACCTTCTTGCAAACATA
CCACCATTCCGGAGTCATGATCGGTTCGTGGGCGCTCATGCGTTCGATAT
CACCTCACTGTCTGGTGGCTGCACTGTTAAATAGTGGTGTTCATGCCTTA
ATGTACCTATACTACGCTCTCCAGACGCTCAAGATACCAGTCCCAATGCG
CCTCAAGCGGACATTGACGGCTGTACAGATTGCCCAGTTCAGCATTGGGT
ATATCCTAAGTCTGTGCTATCTGTTCATTGCGTATGATTCACCGCATGCG
CGCATCTCAACTGGCAGGGATGATGTTCTGAACGATGAATTGCGGCATAC
TGTGGTACCCTGTCTGCATACCCCAGGTCACTTGGCCGTGCTACTGTTGG
GGGGTCTGTATCTTGGGCCTTTGATTTATCTATTTGTACGGTTCTTTGTT
CGTTCCTATCTGTCTGCAGCCAAGGGGAAGATGGATTGAATGAAGTGGGA
TAACGCTTATGATCATAATGATTACGATGAAGGCTTATGGCAGAAAGGCC
TAGGATATTTCTGCTGGGCCATGTACATATCCAAGTACTACGAGGTGATG
GACACGGTCATTCTGATCCTGAAGGGAAAGGAAAGCACCTTCTTGCAAAC
ATACCACCATTCCGGAGTCATGATCGGTTCGTGGGCGCTCATGCGTTCGA
TATCACCTCACTGTCTGGTGGCTGCACTGTTAAATAGTGGTGTTCATGCC
TTAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002076 |
| DBxref | PFAM:PF01151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5187252..5187952 - |
|
