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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5199357..5201404+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011088-T1 ID=KJC3_011088-T1|Name=KJC3_011088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2048bp|location=Sequence derived from alignment at ch7:5199357..5201404+ (Aspergillus niger KJC3)
CGAGAACACTGGAAATCAGGGTCGTGAAGGTGGTCGTCAGGATACTAGAG
GTAAGAAACATCTTTTGTCTTGGTGTTATTTGAAAGTCGGATGCAGTGTC
TGTTGGAAGCATCTTACGACGGGACATGGTGTCGGTAGTTGTAAGCCTGG
TATAGTGGTGCCTGAGCTTATGATTGCTACGCATCAAAGTTCGAGATGTC
TTGACACAAAGGTGTTTCCACATTCTTGCTACTCTGTGCTAATTACTTTT
TAGGAGCCACACGGAGTGGTTACCCTTACTTCAACCCGGTTCAGGCGATC
TCTTATCCATCGCCGTATAACCCTAGTAAGTACATGCTGTCGGATATTGC
AGCACTCATGCTAACCCACGAATAGATGATTCCACATTCTGGCGAGACGC
GGGGGTGAACAAGTATACCGCCTTGCACTCCCATCCGGTCCACCCGATTC
GTATCCCCAGAGGATACACTCAGAACGTTGGCGCAGGAGTCGAGTTGTAT
TCGCCACAAGAAACGCGTGCAAGCCATGAGCCGCCACTCATGCCACGCCA
ACAATACATCGAAAGACTACCTGCTCCCGGCGCTGGAACACACACTCCAA
CGACCACACTTGTGAGAGCAGGAGAGTTGACTATCACCTTGTCGGAGCCC
GTCAGCCCTCCCCGTGCCTCGATATCTCGCAATAATTCAATGCCAGAGGC
CACGGAGGATGGCAAAGCTTCCGGAAGGCATCCACCACGATCATTCTCTC
TCCAGCCATTGCGTGGTCACCCAGCCGAAAACAATAGTCACGGACCTCCT
ACCACTTTCGATGAGATCTTCCCCCCCGTCTCCCACGACGGAGACAGAAC
TTCAAATACAAGTGCCCCGACCGCCTTTAGCATCCGTGGCATGTTGCAGA
AGACCCGGGGCGCCGAAAAGAGTAGTAGGGGCCCAACTGACAAATCGAAA
TTGCGAAGCAGCGGCAGTGGTGCCGGCAAGACGGTTTTCAAGGGCAGGAA
GTCCAGGAAGAACGCAGGCAACCCAATGACTTCGCTTGGAGCTATATCAA
CGCCAACAGCTGTGCCTACTCCCTCATTGTTGCAGCAACTTGGGAGAAAG
TACATCGAGCTTAGCCCAAGCCAAGACACACCCGCATATCTTCAGCAGAC
AGTGTCGACACCAATGGAGCCCGCCACTCCGGACTCACCAAGCCTCCATG
CTCAGCCAGCAGCTTTCGCCACACGCAGTAAGAATGCCATGACCGGGCAT
CACGAAACCATGACCATGCCTCGACTTGTTCTGTCTCGCTCTACAGAACT
TCGCAGACCAGAGAGCAACGCAACTAGTGATGCAGGAGTGCAGACCGGAC
CATCCGCCAATGGTCTGGTTGGGACCTGCGCACAGTTCGATGCACTCAGT
GGTGCCGTCTGCAGAAAAGTCCGAGAAGCAGAGACAAGTGTACAAAGAGA
CCAGTACTTGAAAGTAAGTTTTTATACCACTGTTCAATCTAGTACAGATG
ACTGATAATGTAAATAGAAGGCTCTTGAAGTGCAGAAGCTGCTCGTCGAC
TACCAGCGGCTGGGAGAGATTGTTGAGGATACTTCTAAGTTCCTCAACCA
GAAGATGATGGAGAGGGAGTCGATCGAGGCCAAGCTTCGAGCTATGATGG
AGGAGTCGTAGATTAAATTCTGCTTTCTGCCAATCAGTGTGTGAACTGAG
TGAACCTATGTGAAGGTCCTTTCTATATGCTTACCAACAATCCGTGATTC
TGTATCTTCCCTTATTCTGTTGTTGCTGTCCCACACCTTGTCGTGGTGGG
CAGAGAAGGAAGAAAGTCATCAAAAGGAGAGAATGAGACTAAGTCAGAGA
GATACAGATAACCTTCCAAATTGCTGTGATCTTGGTATTCATTCGTAGCG
TTCTCACATCTCCTTGGTCTTCCAGTCCTGGTTCTGGTTCTTGTCCTCTC
TACTACTGTTCATTATCTGGGCACAAGAAATGACAGACTTGGTCCCTGAG
AGAACGGATTTGTCACTGAGAACACCGAGAGCTAGAAAAGTGAGCCGA back to topCoding sequence (CDS) from alignment at ch7:5199357..5201404+ >KJC3_011088-T1 ID=KJC3_011088-T1|Name=KJC3_011088-T1|organism=Aspergillus niger KJC3|type=CDS|length=2136bp|location=Sequence derived from alignment at ch7:5199357..5201404+ (Aspergillus niger KJC3)
ATGCCACGCCAACAATACATCGAAAGACTACCTGCTCCCGGCGCTGGAAC
ACACACTCCAACGACCACACTTGTGAGAGCAGGAGAGTTGACTATCACCT
TGTCGGAGCCCGTCAGCCCTCCCCGTGCCTCGATATCTCGCAATAATTCA
ATGCCAGAGGCCACGGAGGATGGCAAAGCTTCCGGAAGGCATCCACCACG
ATCATTCTCTCTCCAGCCATTGCGTGGTCACCCAGCCGAAAACAATAGTC
ACGGACCTCCTACCACTTTCGATGAGATCTTCCCCCCCGTCTCCCACGAC
GGAGACAGAACTTCAAATACAAGTGCCCCGACCGCCTTTAGCATCCGTGG
CATGTTGCAGAAGACCCGGGGCGCCGAAAAGAGTAGTAGGGGCCCAACTG
ACAAATCGAAATTGCGAAGCAGCGGCAGTGGTGCCGGCAAGACGGTTTTC
AAGGGCAGGAAGTCCAGGAAGAACGCAGGCAACCCAATGACTTCGCTTGG
AGCTATATCAACGCCAACAGCTGTGCCTACTCCCTCATTGTTGCAGCAAC
TTGGGAGAAAGTACATCGAGCTTAGCCCAAGCCAAGACACACCCGCATAT
CTTCAGCAGACAGTGTCGACACCAATGGAGCCCGCCACTCCGGACTCACC
AAGCCTCCATGCTCAGCCAGCAGCTTTCGCCACACGCAGTAAGAATGCCA
TGACCGGGCATCACGAAACCATGACCATGCCTCGACTTGTTCTGTCTCGC
TCTACAGAACTTCGCAGACCAGAGAGCAACGCAACTAGTGATGCAGGAGT
GCAGACCGGACCATCCGCCAATGGTCTGGTTGGGACCTGCGCACAGTTCG
ATGCACTCAGTGGTGCCGTCTGCAGAAAAGTCCGAGAAGCAGAGACAAGT
GTACAAAGAGACCAGTACTTGAAAAAGGCTCTTGAAGTGCAGAAGCTGCT
CGTCGACTACCAGCGGCTGGGAGAGATTGTTGAGGATACTTCTAAGTTCC
TCAACCAGAAGATGATGGAGAGGGAGTCGATCGAGGCCAAGCTTCGAGCT
ATGATGGAGGAGTCGTAGATGCCACGCCAACAATACATCGAAAGACTACC
TGCTCCCGGCGCTGGAACACACACTCCAACGACCACACTTGTGAGAGCAG
GAGAGTTGACTATCACCTTGTCGGAGCCCGTCAGCCCTCCCCGTGCCTCG
ATATCTCGCAATAATTCAATGCCAGAGGCCACGGAGGATGGCAAAGCTTC
CGGAAGGCATCCACCACGATCATTCTCTCTCCAGCCATTGCGTGGTCACC
CAGCCGAAAACAATAGTCACGGACCTCCTACCACTTTCGATGAGATCTTC
CCCCCCGTCTCCCACGACGGAGACAGAACTTCAAATACAAGTGCCCCGAC
CGCCTTTAGCATCCGTGGCATGTTGCAGAAGACCCGGGGCGCCGAAAAGA
GTAGTAGGGGCCCAACTGACAAATCGAAATTGCGAAGCAGCGGCAGTGGT
GCCGGCAAGACGGTTTTCAAGGGCAGGAAGTCCAGGAAGAACGCAGGCAA
CCCAATGACTTCGCTTGGAGCTATATCAACGCCAACAGCTGTGCCTACTC
CCTCATTGTTGCAGCAACTTGGGAGAAAGTACATCGAGCTTAGCCCAAGC
CAAGACACACCCGCATATCTTCAGCAGACAGTGTCGACACCAATGGAGCC
CGCCACTCCGGACTCACCAAGCCTCCATGCTCAGCCAGCAGCTTTCGCCA
CACGCAGTAAGAATGCCATGACCGGGCATCACGAAACCATGACCATGCCT
CGACTTGTTCTGTCTCGCTCTACAGAACTTCGCAGACCAGAGAGCAACGC
AACTAGTGATGCAGGAGTGCAGACCGGACCATCCGCCAATGGTCTGGTTG
GGACCTGCGCACAGTTCGATGCACTCAGTGGTGCCGTCTGCAGAAAAGTC
CGAGAAGCAGAGACAAGTGTACAAAGAGACCAGTACTTGAAAAAGGCTCT
TGAAGTGCAGAAGCTGCTCGTCGACTACCAGCGGCTGGGAGAGATTGTTG
AGGATACTTCTAAGTTCCTCAACCAGAAGATGATGGAGAGGGAGTCGATC
GAGGCCAAGCTTCGAGCTATGATGGAGGAGTCGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011088-T1.utr3p1 | KJC3_011088-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5199357..5201404 + |
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