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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5207931..5210395+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011092-T1 ID=KJC3_011092-T1|Name=KJC3_011092-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2465bp|location=Sequence derived from alignment at ch7:5207931..5210395+ (Aspergillus niger KJC3)
TTCCTCGCTCCTCGTCGGAGAATTCCAGACATGAAGATCATCAGATAGTC
CTGTATCCGATGTGACACCAGTACCAGTGTCTGTCTACTGTACAAAGGTT
GAAACCCCAACCTCCCCATCCCCTGAGCTTCGCACTGGTTACCCGATTCA
GCTGCATGTCAACTGGCCCCCGCTATCCTCTAAATCTGGGCAGGTCAGAA
TGAATACTCACGCTGCATTTAGTCCGATTAGTCCATAGCGCCACATTGCA
TTCCGTGCACGCCCCGCTCGTCTACCATTAGACATGGTTTTCTGCGGCAA
ACCAAGCAAGGGCTGCGGCGAATGCCGGTCTCGCAAAATCCGGTGCGACC
AAACCCGTCCAACCTGTTCACAATGCGCCAAGGGCAACCGGGTCTGCCCC
GGATACCGCGACCAACTATCCTTGATGTTTCGGGATGAGAGCCAGCAGGT
TATCCGGAAGGCGCGGACCGGGACAACGGCGCGCAGAGCCAAGTCTTCTA
GAAAGACCAGTCCTGGCAGTACTACTAATACTACTACTACTACTACTAGT
AGTAGTAATAGTAGCGCCCCAGCTTCTTCCCCTAGTGGCAGTGGCATAGT
AACTGCCAGTCCTAGTCCAGGCCCAGTGTTATCCTCGGCAGACAGTAATC
CATCTTCAACGACCGGTGATCTGGAACCGTTTGAGTTCGACGGTCCTGAG
TATCTATCCCCACAATTTGTCCAGCAGCACGCCATACAACAGCCCCTGGT
ATTGCAGCCATCGTACCAACCGACAAAAAATGAAGCTATTTCTTATTTCC
TTCGGCAGAATGCTTGGATTGGATCATTCTGGTCGAAGATTGAAGCAAAC
CCTGATATCTTGCGCAGGGCATCGGCAACTAGCCACAACGCCCTGATGAC
TAGCTTGGCTTCTGTTGGTATAGCAATGATCTCGCGTATCAGGAAATCCG
AACCGATGAAAATAGCCGCGGAGAAGGAGTACGGAAATGCTTTACAGCTC
CTTACCACGGCCGTTGCAGATCAACAGCAAGCTAAGAACAATGCAACGCT
TGCCGCTGTGCTTATGTTGGCTATCTTCGAAGTGAGTCATTCTGCTTGTT
TGGTGACCCCAAAACTAACGTCTCCCAGGTTATCACTAGTAGAGGTTCTC
GCTTTATTACTAATTGGACGAATCACATAACTGGCGCTGCAGCGCTGCTA
GAGCTGCGAGGTGTAGAGCAGCTTCAGGACCCAGATGGGCTGCAGCTCTT
TTTGCAGCTGCGATATCAGATTGTAGGTTCAGCGAGTTTGCTTGACTCCT
TACCTGGAGCGACTAACTTACGATTTCAAAGATTATAAGCTGTCTCCAAA
GGGAGGCGCACGTGCCCGACTCAGTTCTTCACTGTGTCAAAGTTGCCATG
TTTCTACGACCGCATACAGTGGCCTATGGTGACCGCTTGCTTAACATAAT
GGGCCGGCTAGCCAACCTGCGAGCTGACATCAAGGAAAAAATTATAACCG
ACCGGAAAAAGATGCTTGAATCTGCATACGCCGTCGAGGCTGAGTTGATG
TCATGGCTTACATCTTTGCCAGACAACTTCCCATATGCCACCATTCAAGA
TCCCTGGCCTACTCTCAACTGGGGTCCCAAGCCTTATAACAACATCTATC
ACGTGTACACTGACTTCTGGATCTGCAACTCGTGGAACCAATACCGAGTC
GCACGGATCATCATCAGCGATCTCATCCTGACATGTATCCGGGAACTAAA
CGCCGGCTCACCCCTCCCTGCCGATCTTGTCACCCATACCTCTCAGATTC
GCAATACTGCCCGACAGCTCGCCAGTGACGTCTGCGCTAGTGTGCCTTAT
TATTTTACTGATAGTGTCTTCAAGCTCGCGACCGGACAAGCGGAAATGAG
TTCTCGTTATGAGATACCCTCACAGCAAGGCTTCGTTCGCGGTCTGGTGC
TCCTCTGGCCGCTGGCAATGGCAGCCGCAACGAGAGGGCTGAATCACCCA
TTACGCCGCTGGGTGCTTGACTGTCTCCAGCTGATCGGACATGGCATGGG
GATTGATCAGGCGCTGGCTTTGATTGAACTCCTGATGACCGAAGATGGTG
TCTTTGACACGCTGGCCCTCCCGGAGGACGATAGCCTTTCAATCGGCTCG
ACTGGAGCCAATTTTAGCACCGATAACAGTGGCAAACACTGGACGGGAGC
CTCGCTGAGTACATATACCACTCAGGTGGAGTGAGTGTCTGCGACATTAC
CCACAAAGTGGCAGGCCACGTGTAAATAGTCGCGATTAATTCGTCTGATA
GCGTTGATACAGTGTATGTGGGCTGACACTAATTCCCACTAGTATATAGT
ACTTTTTTCTGGAACACTTCACATGAGACAGGATCTACATAGTAGTCACA
AACCGAGATAATGTATACATCAAACCTACTGCCACAATCAATTCAACCCT
CAATTTCATAGTTGC back to topCoding sequence (CDS) from alignment at ch7:5207931..5210395+ >KJC3_011092-T1 ID=KJC3_011092-T1|Name=KJC3_011092-T1|organism=Aspergillus niger KJC3|type=CDS|length=5535bp|location=Sequence derived from alignment at ch7:5207931..5210395+ (Aspergillus niger KJC3)
ATGGTTTTCTGCGGCAAACCAAGCAAGGGCTGCGGCGAATGCCGGTCTCG
CAAAATCCGGTGCGACCAAACCCGTCCAACCTGTTCACAATGCGCCAAGG
GCAACCGGGTCTGCCCCGGATACCGCGACCAACTATCCTTGATGTTTCGG
GATGAGAGCCAGCAGGTTATCCGGAAGGCGCGGACCGGGACAACGGCGCG
CAGAGCCAAGTCTTCTAGAAAGACCAGTCCTGGCAGTACTACTAATACTA
CTACTACTACTACTAGTAGTAGTAATAGTAGCGCCCCAGCTTCTTCCCCT
AGTGGCAGTGGCATAGTAACTGCCAGTCCTAGTCCAGGCCCAGTGTTATC
CTCGGCAGACAGTAATCCATCTTCAACGACCGGTGATCTGGAACCGTTTG
AGTTCGACGGTCCTGAGTATCTATCCCCACAATTTGTCCAGCAGCACGCC
ATACAACAGCCCCTGGTATTGCAGCCATCGTACCAACCGACAAAAAATGA
AGCTATTTCTTATTTCCTTCGGCAGAATGCTTGGATTGGATCATTCTGGT
CGAAGATTGAAGCAAACCCTGATATCTTGCGCAGGGCATCGGCAACTAGC
CACAACGCCCTGATGACTAGCTTGGCTTCTGTTGGTATAGCAATGATCTC
GCGTATCAGGAAATCCGAACCGATGAAAATAGCCGCGGAGAAGGAGTACG
GAAATGCTTTACAGCTCCTTACCACGGCCGTTGCAGATCAACAGCAAGCT
AAGAACAATGCAACGCTTGCCGCTGTGCTTATGTTGGCTATCTTCGAAGT
TATCACTAGTAGAGGTTCTCGCTTTATTACTAATTGGACGAATCACATAA
CTGGCGCTGCAGCGCTGCTAGAGCTGCGAGGTGTAGAGCAGCTTCAGGAC
CCAGATGGGCTGCAGCTCTTTTTGCAGCTGCGATATCAGATTATTATAAG
CTGTCTCCAAAGGGAGGCGCACGTGCCCGACTCAGTTCTTCACTGTGTCA
AAGTTGCCATGTTTCTACGACCGCATACAGTGGCCTATGGTGACCGCTTG
CTTAACATAATGGGCCGGCTAGCCAACCTGCGAGCTGACATCAAGGAAAA
AATTATAACCGACCGGAAAAAGATGCTTGAATCTGCATACGCCGTCGAGG
CTGAGTTGATGTCATGGCTTACATCTTTGCCAGACAACTTCCCATATGCC
ACCATTCAAGATCCCTGGCCTACTCTCAACTGGGGTCCCAAGCCTTATAA
CAACATCTATCACGTGTACACTGACTTCTGGATCTGCAACTCGTGGAACC
AATACCGAGTCGCACGGATCATCATCAGCGATCTCATCCTGACATGTATC
CGGGAACTAAACGCCGGCTCACCCCTCCCTGCCGATCTTGTCACCCATAC
CTCTCAGATTCGCAATACTGCCCGACAGCTCGCCAGTGACGTCTGCGCTA
GTGTGCCTTATTATTTTACTGATAGTGTCTTCAAGCTCGCGACCGGACAA
GCGGAAATGAGTTCTCGTTATGAGATACCCTCACAGCAAGGCTTCGTTCG
CGGTCTGGTGCTCCTCTGGCCGCTGGCAATGGCAGCCGCAACGAGAGGGC
TGAATCACCCATTACGCCGCTGGGTGCTTGACTGTCTCCAGCTGATCGGA
CATGGCATGGGGATTGATCAGGCGCTGGCTTTGATTGAACTCCTGATGAC
CGAAGATGGTGTCTTTGACACGCTGGCCCTCCCGGAGGACGATAGCCTTT
CAATCGGCTCGACTGGAGCCAATTTTAGCACCGATAACAGTGGCAAACAC
TGGACGGGAGCCTCGCTGAGTACATATACCACTCAGGTGGAGTGAATGGT
TTTCTGCGGCAAACCAAGCAAGGGCTGCGGCGAATGCCGGTCTCGCAAAA
TCCGGTGCGACCAAACCCGTCCAACCTGTTCACAATGCGCCAAGGGCAAC
CGGGTCTGCCCCGGATACCGCGACCAACTATCCTTGATGTTTCGGGATGA
GAGCCAGCAGGTTATCCGGAAGGCGCGGACCGGGACAACGGCGCGCAGAG
CCAAGTCTTCTAGAAAGACCAGTCCTGGCAGTACTACTAATACTACTACT
ACTACTACTAGTAGTAGTAATAGTAGCGCCCCAGCTTCTTCCCCTAGTGG
CAGTGGCATAGTAACTGCCAGTCCTAGTCCAGGCCCAGTGTTATCCTCGG
CAGACAGTAATCCATCTTCAACGACCGGTGATCTGGAACCGTTTGAGTTC
GACGGTCCTGAGTATCTATCCCCACAATTTGTCCAGCAGCACGCCATACA
ACAGCCCCTGGTATTGCAGCCATCGTACCAACCGACAAAAAATGAAGCTA
TTTCTTATTTCCTTCGGCAGAATGCTTGGATTGGATCATTCTGGTCGAAG
ATTGAAGCAAACCCTGATATCTTGCGCAGGGCATCGGCAACTAGCCACAA
CGCCCTGATGACTAGCTTGGCTTCTGTTGGTATAGCAATGATCTCGCGTA
TCAGGAAATCCGAACCGATGAAAATAGCCGCGGAGAAGGAGTACGGAAAT
GCTTTACAGCTCCTTACCACGGCCGTTGCAGATCAACAGCAAGCTAAGAA
CAATGCAACGCTTGCCGCTGTGCTTATGTTGGCTATCTTCGAAGTTATCA
CTAGTAGAGGTTCTCGCTTTATTACTAATTGGACGAATCACATAACTGGC
GCTGCAGCGCTGCTAGAGCTGCGAGGTGTAGAGCAGCTTCAGGACCCAGA
TGGGCTGCAGCTCTTTTTGCAGCTGCGATATCAGATTATTATAAGCTGTC
TCCAAAGGGAGGCGCACGTGCCCGACTCAGTTCTTCACTGTGTCAAAGTT
GCCATGTTTCTACGACCGCATACAGTGGCCTATGGTGACCGCTTGCTTAA
CATAATGGGCCGGCTAGCCAACCTGCGAGCTGACATCAAGGAAAAAATTA
TAACCGACCGGAAAAAGATGCTTGAATCTGCATACGCCGTCGAGGCTGAG
TTGATGTCATGGCTTACATCTTTGCCAGACAACTTCCCATATGCCACCAT
TCAAGATCCCTGGCCTACTCTCAACTGGGGTCCCAAGCCTTATAACAACA
TCTATCACGTGTACACTGACTTCTGGATCTGCAACTCGTGGAACCAATAC
CGAGTCGCACGGATCATCATCAGCGATCTCATCCTGACATGTATCCGGGA
ACTAAACGCCGGCTCACCCCTCCCTGCCGATCTTGTCACCCATACCTCTC
AGATTCGCAATACTGCCCGACAGCTCGCCAGTGACGTCTGCGCTAGTGTG
CCTTATTATTTTACTGATAGTGTCTTCAAGCTCGCGACCGGACAAGCGGA
AATGAGTTCTCGTTATGAGATACCCTCACAGCAAGGCTTCGTTCGCGGTC
TGGTGCTCCTCTGGCCGCTGGCAATGGCAGCCGCAACGAGAGGGCTGAAT
CACCCATTACGCCGCTGGGTGCTTGACTGTCTCCAGCTGATCGGACATGG
CATGGGGATTGATCAGGCGCTGGCTTTGATTGAACTCCTGATGACCGAAG
ATGGTGTCTTTGACACGCTGGCCCTCCCGGAGGACGATAGCCTTTCAATC
GGCTCGACTGGAGCCAATTTTAGCACCGATAACAGTGGCAAACACTGGAC
GGGAGCCTCGCTGAGTACATATACCACTCAGGTGGAGTGAATGGTTTTCT
GCGGCAAACCAAGCAAGGGCTGCGGCGAATGCCGGTCTCGCAAAATCCGG
TGCGACCAAACCCGTCCAACCTGTTCACAATGCGCCAAGGGCAACCGGGT
CTGCCCCGGATACCGCGACCAACTATCCTTGATGTTTCGGGATGAGAGCC
AGCAGGTTATCCGGAAGGCGCGGACCGGGACAACGGCGCGCAGAGCCAAG
TCTTCTAGAAAGACCAGTCCTGGCAGTACTACTAATACTACTACTACTAC
TACTAGTAGTAGTAATAGTAGCGCCCCAGCTTCTTCCCCTAGTGGCAGTG
GCATAGTAACTGCCAGTCCTAGTCCAGGCCCAGTGTTATCCTCGGCAGAC
AGTAATCCATCTTCAACGACCGGTGATCTGGAACCGTTTGAGTTCGACGG
TCCTGAGTATCTATCCCCACAATTTGTCCAGCAGCACGCCATACAACAGC
CCCTGGTATTGCAGCCATCGTACCAACCGACAAAAAATGAAGCTATTTCT
TATTTCCTTCGGCAGAATGCTTGGATTGGATCATTCTGGTCGAAGATTGA
AGCAAACCCTGATATCTTGCGCAGGGCATCGGCAACTAGCCACAACGCCC
TGATGACTAGCTTGGCTTCTGTTGGTATAGCAATGATCTCGCGTATCAGG
AAATCCGAACCGATGAAAATAGCCGCGGAGAAGGAGTACGGAAATGCTTT
ACAGCTCCTTACCACGGCCGTTGCAGATCAACAGCAAGCTAAGAACAATG
CAACGCTTGCCGCTGTGCTTATGTTGGCTATCTTCGAAGTTATCACTAGT
AGAGGTTCTCGCTTTATTACTAATTGGACGAATCACATAACTGGCGCTGC
AGCGCTGCTAGAGCTGCGAGGTGTAGAGCAGCTTCAGGACCCAGATGGGC
TGCAGCTCTTTTTGCAGCTGCGATATCAGATTATTATAAGCTGTCTCCAA
AGGGAGGCGCACGTGCCCGACTCAGTTCTTCACTGTGTCAAAGTTGCCAT
GTTTCTACGACCGCATACAGTGGCCTATGGTGACCGCTTGCTTAACATAA
TGGGCCGGCTAGCCAACCTGCGAGCTGACATCAAGGAAAAAATTATAACC
GACCGGAAAAAGATGCTTGAATCTGCATACGCCGTCGAGGCTGAGTTGAT
GTCATGGCTTACATCTTTGCCAGACAACTTCCCATATGCCACCATTCAAG
ATCCCTGGCCTACTCTCAACTGGGGTCCCAAGCCTTATAACAACATCTAT
CACGTGTACACTGACTTCTGGATCTGCAACTCGTGGAACCAATACCGAGT
CGCACGGATCATCATCAGCGATCTCATCCTGACATGTATCCGGGAACTAA
ACGCCGGCTCACCCCTCCCTGCCGATCTTGTCACCCATACCTCTCAGATT
CGCAATACTGCCCGACAGCTCGCCAGTGACGTCTGCGCTAGTGTGCCTTA
TTATTTTACTGATAGTGTCTTCAAGCTCGCGACCGGACAAGCGGAAATGA
GTTCTCGTTATGAGATACCCTCACAGCAAGGCTTCGTTCGCGGTCTGGTG
CTCCTCTGGCCGCTGGCAATGGCAGCCGCAACGAGAGGGCTGAATCACCC
ATTACGCCGCTGGGTGCTTGACTGTCTCCAGCTGATCGGACATGGCATGG
GGATTGATCAGGCGCTGGCTTTGATTGAACTCCTGATGACCGAAGATGGT
GTCTTTGACACGCTGGCCCTCCCGGAGGACGATAGCCTTTCAATCGGCTC
GACTGGAGCCAATTTTAGCACCGATAACAGTGGCAAACACTGGACGGGAG
CCTCGCTGAGTACATATACCACTCAGGTGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011092-T1.utr3p1 | KJC3_011092-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5207931..5210395 + |
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