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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5227613..5229158+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011099-T1 ID=KJC3_011099-T1|Name=KJC3_011099-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1546bp|location=Sequence derived from alignment at ch7:5227613..5229158+ (Aspergillus niger KJC3)
GCCGCCCCATGTTTCCCCGCAACATTTCCCGCTATCCATTTATCAACACC
GTCTCATGCCTACACATCCCAGCCAACTACAATCCCTTACCTCCTGTCTG
CTCCTAATCCCTTAAGAAAAAGTATTCCAACATGCCTCTAGACACAATAT
ACCTCACCCGCCATGGCGTAAGTCCTCCGACCCACCATATCCCACCCCCT
ACTACTTCACCGTCTCCCCTCCATCACAACGAAGTACTAAGAATATATCT
CCAGCACCGTCTCAACTGGACAATCGACTACAAAACCGGCACCTACCACG
CCCAATTTCCTACGCCAACCGGTAACCCAGCGGACCCAACCCTGACCTCT
CACGGCGTGCTCCAATCCCACGAACTGGCCGCCCATTTCACCAGCGACAA
TGTATCCCCCAAGCCGTTCCGCATCTACAGCAGTCCATTCTACCGATGTC
TGCAGACGATCCAACCCACAGTCGAGGCATTGAAGCAGCAGCAGCAGCAG
GTATCTACCACCCCATCTACTAACAATGAGCCCCCCGCAATCGACACCCA
CGCCGACTTGACCGTCCGCACTGAACCAGGCCTGGGGTACGTTTCCCCCT
CCTCTCCCTCCCTCCAATCTACCAACATTACATATAAACTGATATCTAAT
GGAATGAATACAGAGAATGGTTCGGCCCAACAACCTTCTTCCACCACCCA
GCCCCCGCACCCGCCTCAATCCTCTCTTCCCACTTCCCCACCATCCTCCC
ATCCTCATCCAGTGAACAAACCACCTACACCCCCATCCTCCACCCCTCCA
CCCGCGGCGAAACCATCGCCCAACTCCACGACCGCGTCGCAACCACCCTC
TCGGCCCTCATCATCTCCGTAGACGAGGAAATCTCAGCCATCGAGGCCTC
CCTCCCTCCCTCGCAACGAACCAGCAAAGCAATCCTGATCTGCTCGCATG
CTGCGCCGCTGATTGCTATGGGAAGGGCCTTGACGGGGGATATGCCCGCT
GATTCTTCGGTCGAGGATTTCAAGGTTTATACGGCGGGGGTTAGTACATT
CAGACGTAGGAGGGCAGGGGAGGGTAATAGGGAAGGGGAAGGGGATGGTG
GAGAGGGTGGTGGTCTTGCGCCGGGAACGGAGGTAGTTAGAGGTGATGAT
GGAGGGGTGAAAGTTCCTGATTGGAAAGGGGGGAAGGGGGTTGCTGGGGG
GTGGGAGTGTGTGAGTAATGGGGATTGTGCGTTTTTGAGTGGTGGGGCGG
AGAGGGGATGGTATGTTTCTCTTCCTTTATTACCCCATATGGTTTTTGTG
TGTTGGTTTGGGGATGTTGTTTGGTTGTTGATTGCTAACTGGTGCTGATG
TAGGCACTTCGATGGCGACGAGTCGTTTGATACGGGCCCCATGGCTGGTC
CGTCGGCTACCCCGACTTCTAGTGTAGATTCATCGGCTGAGACTGATTTG
GGGGGCAGTAAGTTATAGATAGAGTGGATTATGTGTGGGTGGATGTGGAT
AGATTACTTGAAGGTACACTGCAGTAGATATATGTTGCGCTAATAG back to topCoding sequence (CDS) from alignment at ch7:5227613..5229158+ >KJC3_011099-T1 ID=KJC3_011099-T1|Name=KJC3_011099-T1|organism=Aspergillus niger KJC3|type=CDS|length=4320bp|location=Sequence derived from alignment at ch7:5227613..5229158+ (Aspergillus niger KJC3)
ATGCCTCTAGACACAATATACCTCACCCGCCATGGCCACCGTCTCAACTG
GACAATCGACTACAAAACCGGCACCTACCACGCCCAATTTCCTACGCCAA
CCGGTAACCCAGCGGACCCAACCCTGACCTCTCACGGCGTGCTCCAATCC
CACGAACTGGCCGCCCATTTCACCAGCGACAATGTATCCCCCAAGCCGTT
CCGCATCTACAGCAGTCCATTCTACCGATGTCTGCAGACGATCCAACCCA
CAGTCGAGGCATTGAAGCAGCAGCAGCAGCAGGTATCTACCACCCCATCT
ACTAACAATGAGCCCCCCGCAATCGACACCCACGCCGACTTGACCGTCCG
CACTGAACCAGGCCTGGGAGAATGGTTCGGCCCAACAACCTTCTTCCACC
ACCCAGCCCCCGCACCCGCCTCAATCCTCTCTTCCCACTTCCCCACCATC
CTCCCATCCTCATCCAGTGAACAAACCACCTACACCCCCATCCTCCACCC
CTCCACCCGCGGCGAAACCATCGCCCAACTCCACGACCGCGTCGCAACCA
CCCTCTCGGCCCTCATCATCTCCGTAGACGAGGAAATCTCAGCCATCGAG
GCCTCCCTCCCTCCCTCGCAACGAACCAGCAAAGCAATCCTGATCTGCTC
GCATGCTGCGCCGCTGATTGCTATGGGAAGGGCCTTGACGGGGGATATGC
CCGCTGATTCTTCGGTCGAGGATTTCAAGGTTTATACGGCGGGGGTTAGT
ACATTCAGACGTAGGAGGGCAGGGGAGGGTAATAGGGAAGGGGAAGGGGA
TGGTGGAGAGGGTGGTGGTCTTGCGCCGGGAACGGAGGTAGTTAGAGGTG
ATGATGGAGGGGTGAAAGTTCCTGATTGGAAAGGGGGGAAGGGGGTTGCT
GGGGGGTGGGAGTGTGTGAGTAATGGGGATTGTGCGTTTTTGAGTGGTGG
GGCGGAGAGGGGATGGCACTTCGATGGCGACGAGTCGTTTGATACGGGCC
CCATGGCTGGTCCGTCGGCTACCCCGACTTCTAGTGTAGATTCATCGGCT
GAGACTGATTTGGGGGGCAGTAAGTTATAGATGCCTCTAGACACAATATA
CCTCACCCGCCATGGCCACCGTCTCAACTGGACAATCGACTACAAAACCG
GCACCTACCACGCCCAATTTCCTACGCCAACCGGTAACCCAGCGGACCCA
ACCCTGACCTCTCACGGCGTGCTCCAATCCCACGAACTGGCCGCCCATTT
CACCAGCGACAATGTATCCCCCAAGCCGTTCCGCATCTACAGCAGTCCAT
TCTACCGATGTCTGCAGACGATCCAACCCACAGTCGAGGCATTGAAGCAG
CAGCAGCAGCAGGTATCTACCACCCCATCTACTAACAATGAGCCCCCCGC
AATCGACACCCACGCCGACTTGACCGTCCGCACTGAACCAGGCCTGGGAG
AATGGTTCGGCCCAACAACCTTCTTCCACCACCCAGCCCCCGCACCCGCC
TCAATCCTCTCTTCCCACTTCCCCACCATCCTCCCATCCTCATCCAGTGA
ACAAACCACCTACACCCCCATCCTCCACCCCTCCACCCGCGGCGAAACCA
TCGCCCAACTCCACGACCGCGTCGCAACCACCCTCTCGGCCCTCATCATC
TCCGTAGACGAGGAAATCTCAGCCATCGAGGCCTCCCTCCCTCCCTCGCA
ACGAACCAGCAAAGCAATCCTGATCTGCTCGCATGCTGCGCCGCTGATTG
CTATGGGAAGGGCCTTGACGGGGGATATGCCCGCTGATTCTTCGGTCGAG
GATTTCAAGGTTTATACGGCGGGGGTTAGTACATTCAGACGTAGGAGGGC
AGGGGAGGGTAATAGGGAAGGGGAAGGGGATGGTGGAGAGGGTGGTGGTC
TTGCGCCGGGAACGGAGGTAGTTAGAGGTGATGATGGAGGGGTGAAAGTT
CCTGATTGGAAAGGGGGGAAGGGGGTTGCTGGGGGGTGGGAGTGTGTGAG
TAATGGGGATTGTGCGTTTTTGAGTGGTGGGGCGGAGAGGGGATGGCACT
TCGATGGCGACGAGTCGTTTGATACGGGCCCCATGGCTGGTCCGTCGGCT
ACCCCGACTTCTAGTGTAGATTCATCGGCTGAGACTGATTTGGGGGGCAG
TAAGTTATAGATGCCTCTAGACACAATATACCTCACCCGCCATGGCCACC
GTCTCAACTGGACAATCGACTACAAAACCGGCACCTACCACGCCCAATTT
CCTACGCCAACCGGTAACCCAGCGGACCCAACCCTGACCTCTCACGGCGT
GCTCCAATCCCACGAACTGGCCGCCCATTTCACCAGCGACAATGTATCCC
CCAAGCCGTTCCGCATCTACAGCAGTCCATTCTACCGATGTCTGCAGACG
ATCCAACCCACAGTCGAGGCATTGAAGCAGCAGCAGCAGCAGGTATCTAC
CACCCCATCTACTAACAATGAGCCCCCCGCAATCGACACCCACGCCGACT
TGACCGTCCGCACTGAACCAGGCCTGGGAGAATGGTTCGGCCCAACAACC
TTCTTCCACCACCCAGCCCCCGCACCCGCCTCAATCCTCTCTTCCCACTT
CCCCACCATCCTCCCATCCTCATCCAGTGAACAAACCACCTACACCCCCA
TCCTCCACCCCTCCACCCGCGGCGAAACCATCGCCCAACTCCACGACCGC
GTCGCAACCACCCTCTCGGCCCTCATCATCTCCGTAGACGAGGAAATCTC
AGCCATCGAGGCCTCCCTCCCTCCCTCGCAACGAACCAGCAAAGCAATCC
TGATCTGCTCGCATGCTGCGCCGCTGATTGCTATGGGAAGGGCCTTGACG
GGGGATATGCCCGCTGATTCTTCGGTCGAGGATTTCAAGGTTTATACGGC
GGGGGTTAGTACATTCAGACGTAGGAGGGCAGGGGAGGGTAATAGGGAAG
GGGAAGGGGATGGTGGAGAGGGTGGTGGTCTTGCGCCGGGAACGGAGGTA
GTTAGAGGTGATGATGGAGGGGTGAAAGTTCCTGATTGGAAAGGGGGGAA
GGGGGTTGCTGGGGGGTGGGAGTGTGTGAGTAATGGGGATTGTGCGTTTT
TGAGTGGTGGGGCGGAGAGGGGATGGCACTTCGATGGCGACGAGTCGTTT
GATACGGGCCCCATGGCTGGTCCGTCGGCTACCCCGACTTCTAGTGTAGA
TTCATCGGCTGAGACTGATTTGGGGGGCAGTAAGTTATAGATGCCTCTAG
ACACAATATACCTCACCCGCCATGGCCACCGTCTCAACTGGACAATCGAC
TACAAAACCGGCACCTACCACGCCCAATTTCCTACGCCAACCGGTAACCC
AGCGGACCCAACCCTGACCTCTCACGGCGTGCTCCAATCCCACGAACTGG
CCGCCCATTTCACCAGCGACAATGTATCCCCCAAGCCGTTCCGCATCTAC
AGCAGTCCATTCTACCGATGTCTGCAGACGATCCAACCCACAGTCGAGGC
ATTGAAGCAGCAGCAGCAGCAGGTATCTACCACCCCATCTACTAACAATG
AGCCCCCCGCAATCGACACCCACGCCGACTTGACCGTCCGCACTGAACCA
GGCCTGGGAGAATGGTTCGGCCCAACAACCTTCTTCCACCACCCAGCCCC
CGCACCCGCCTCAATCCTCTCTTCCCACTTCCCCACCATCCTCCCATCCT
CATCCAGTGAACAAACCACCTACACCCCCATCCTCCACCCCTCCACCCGC
GGCGAAACCATCGCCCAACTCCACGACCGCGTCGCAACCACCCTCTCGGC
CCTCATCATCTCCGTAGACGAGGAAATCTCAGCCATCGAGGCCTCCCTCC
CTCCCTCGCAACGAACCAGCAAAGCAATCCTGATCTGCTCGCATGCTGCG
CCGCTGATTGCTATGGGAAGGGCCTTGACGGGGGATATGCCCGCTGATTC
TTCGGTCGAGGATTTCAAGGTTTATACGGCGGGGGTTAGTACATTCAGAC
GTAGGAGGGCAGGGGAGGGTAATAGGGAAGGGGAAGGGGATGGTGGAGAG
GGTGGTGGTCTTGCGCCGGGAACGGAGGTAGTTAGAGGTGATGATGGAGG
GGTGAAAGTTCCTGATTGGAAAGGGGGGAAGGGGGTTGCTGGGGGGTGGG
AGTGTGTGAGTAATGGGGATTGTGCGTTTTTGAGTGGTGGGGCGGAGAGG
GGATGGCACTTCGATGGCGACGAGTCGTTTGATACGGGCCCCATGGCTGG
TCCGTCGGCTACCCCGACTTCTAGTGTAGATTCATCGGCTGAGACTGATT
TGGGGGGCAGTAAGTTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011099-T1.utr5p1 | KJC3_011099-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011099-T1.utr3p1 | KJC3_011099-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029033 |
| DBxref | InterPro:IPR013078 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5227613..5229158 + |
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