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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5253183..5255503+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011109-T1 ID=KJC3_011109-T1|Name=KJC3_011109-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2321bp|location=Sequence derived from alignment at ch7:5253183..5255503+ (Aspergillus niger KJC3)
CTCGAAGAGGCAATTCTTTCGATCTAACACCACCGCTACGTACTTTTGAC
CAACATCTCTTCTTTGCACACATATTGTTTCCATTATCCTTTAAATAATA
TGCTCGGCTTCTCAACATGAGGAGGCCGTACATAACGTCGTGATGCCAGT
GTTCCGGCCAGTGGCCTACAAATGTTAACCCAACCTCTTGTGGCGGATAT
CTCAATTCCTACCCCCGGCAGCAAGAGTACAGCATCCACGGACTCTTGTT
TCAACGCTACGAGGAGCTTGTTCACTCTACCCCAATGCTATCATCAACTG
CGCTGACCTAGAGATTACCTACCATAACGTTCCCAAGGATATTGTGAACA
AATCCAAGTGCACAAGATCAGCTAGCTCATCATGGACTCGGAGGGTGCCC
CAGAATCTCAACAGGAGAGTTCAATTTTTGGCATAGGGAAGCTGTCTATA
AACTCAGCCGAAGGCCATTCTGAAGTCACGCATCAGACCAATGGTGTGAC
CCATCCGTTGCCTGACTTAGAGGAGTCGACTGCTCCCTACAAAGTCATCC
TGCAGACAGGCGATGTGATCGTTGAATACTTCGATCCTGAATCTGATATC
TCGACTAAATCCGAAGCGCGCCATCGTCGTTGGCGAGTCTCCAGCGCTGA
TCTAGCGCAAAATAGCCCATATTTTCGGGCCCTTCTTGACCCGGATAAAT
TCTCCGAGGGTAGACGCCTTATGCAACAGAAGATGATGCATCAGAAGCTC
CTGGCTGACAAAATGGTGAATGCTGCGTCTTCCGACAACCAAAATGTAGA
AGTGAGCTATCTGCCTGTCGTAATCCTCCCGAGCAAACATGTCTCATCAA
GGCTTGGGTTGGATGCCATCAAACTGTTTCTGGAGATCCTGTCCTTCAAC
TCCTTTGGAGAAGAACAGAAGTGTTCATTTGATGCGGAACTAAAGTTTCT
GCCCGTGTCTTTGATTGCAAGGCTACTGGAGCTATCGGATGCCTTCAACT
CTCCCCATGTCGTTCGGGAATCTCTCAAAAGAGCCGGCTACGCTTTCGGG
AAGGGGAAATATCAACCTTCAAAATTCGACTCCTCATTACTGAAGCTGAG
TGAGGACCGCATCCGACAAACTGTTTTTGTAGCCCGAATTCTGGATGAGC
CGGTCATATATCAAGTGATGACCCATGCTCTAATACTCCTTGGCTCGAAG
TCTTGGACAAACGGTGTCGAGCCTCCAGTTACTCCTACCTACCCCTGGCG
CTATTTCCCCAACGGTATAGAAGGTATTATCATTATCAAACCAGTCACGC
TAGACAGCCTTCCAAATCCATTTTAGGTAATGCTAATCATATCCCAGAGG
AACTCTACTTCCGCCGACAATGCGTTCTAAACACTATCACCGACCTCCAA
GCCTACTTTCTCCGCGTCTACGGCGCCCTAGAAGACCCCGAGCCCCCCAA
ACCTTTTGTCCCACGACAACCACTCGCACCAGCCATCAACCAAGCGCGTC
CTTTCCAATGCCGCTACGGCTTTGGCAACTCCAGTGCCTGCGACGCCTTC
CACCTAGGGCAGATGACGCGATTCTTTTCCCTTCGCACAAAGACCATCTT
TCTCGGCTCCACCCTAATCGATCCCGACTTCACCCTCGACTCAGACACTG
ACTCCACACCCGAATCACCACCAGCGCCTCCGTCAGACATAACAGCCATC
ATAGCCTCTCTCAAACAATGCCCCGACTATCAAATAGACCCAAACCATGT
CGGCTGCGGCATTCGCCGCCGCTTCCTCCCTCCGCTGGACTGCATAGAAC
GCTTCGTCGGCGACGGACGAGGCCTCCTCGGAATCGATTTCCACTCCTGG
ACGGGCCAGGAATGGCCCTTTGCAATCTCGTCCTCATGGGCTAACCGTAC
CCTTCCTCGCGCAAACGTCATCGATATCCGAATTTCTAAACTGAGCGCTG
TACATGGGGGAAGCGGTGCTCGACTCTCACTCACCTCTCAAGAAGAGAAC
GCCAGGTTACTGTTTACCGCGAAAAAGAGGAACTGGGAGGCTTAGCTCAG
TCTCCTTCTAGGCTAAAGTCTAGCTTCAATTATAGCCTGAAGCACCTAAC
CTCTAACTTGCGTGGCATTTAAGTTCCTACATTGACAGGGGGTTGGTTGT
GTGCTTTGCACACGGGATACATATATGATTCTTGTATTTTCTGATATGTT
GATATTCATCTGGAAGGGGAGACTCTGTATATAACTTATGTGACTTGGAA
AAGAGCATTTGCTGCCCACGTGAAACGTACAAATCGCCACTCTTTGCGTT
GTAGCGAGGAGAAACAGTAGC back to topCoding sequence (CDS) from alignment at ch7:5253183..5255503+ >KJC3_011109-T1 ID=KJC3_011109-T1|Name=KJC3_011109-T1|organism=Aspergillus niger KJC3|type=CDS|length=3180bp|location=Sequence derived from alignment at ch7:5253183..5255503+ (Aspergillus niger KJC3)
ATGGACTCGGAGGGTGCCCCAGAATCTCAACAGGAGAGTTCAATTTTTGG
CATAGGGAAGCTGTCTATAAACTCAGCCGAAGGCCATTCTGAAGTCACGC
ATCAGACCAATGGTGTGACCCATCCGTTGCCTGACTTAGAGGAGTCGACT
GCTCCCTACAAAGTCATCCTGCAGACAGGCGATGTGATCGTTGAATACTT
CGATCCTGAATCTGATATCTCGACTAAATCCGAAGCGCGCCATCGTCGTT
GGCGAGTCTCCAGCGCTGATCTAGCGCAAAATAGCCCATATTTTCGGGCC
CTTCTTGACCCGGATAAATTCTCCGAGGGTAGACGCCTTATGCAACAGAA
GATGATGCATCAGAAGCTCCTGGCTGACAAAATGGTGAATGCTGCGTCTT
CCGACAACCAAAATGTAGAAGTGAGCTATCTGCCTGTCGTAATCCTCCCG
AGCAAACATGTCTCATCAAGGCTTGGGTTGGATGCCATCAAACTGTTTCT
GGAGATCCTGTCCTTCAACTCCTTTGGAGAAGAACAGAAGTGTTCATTTG
ATGCGGAACTAAAGTTTCTGCCCGTGTCTTTGATTGCAAGGCTACTGGAG
CTATCGGATGCCTTCAACTCTCCCCATGTCGTTCGGGAATCTCTCAAAAG
AGCCGGCTACGCTTTCGGGAAGGGGAAATATCAACCTTCAAAATTCGACT
CCTCATTACTGAAGCTGAGTGAGGACCGCATCCGACAAACTGTTTTTGTA
GCCCGAATTCTGGATGAGCCGGTCATATATCAAGTGATGACCCATGCTCT
AATACTCCTTGGCTCGAAGTCTTGGACAAACGGTGTCGAGCCTCCAGTTA
CTCCTACCTACCCCTGGCGCTATTTCCCCAACGGTATAGAAGAGGAACTC
TACTTCCGCCGACAATGCGTTCTAAACACTATCACCGACCTCCAAGCCTA
CTTTCTCCGCGTCTACGGCGCCCTAGAAGACCCCGAGCCCCCCAAACCTT
TTGTCCCACGACAACCACTCGCACCAGCCATCAACCAAGCGCGTCCTTTC
CAATGCCGCTACGGCTTTGGCAACTCCAGTGCCTGCGACGCCTTCCACCT
AGGGCAGATGACGCGATTCTTTTCCCTTCGCACAAAGACCATCTTTCTCG
GCTCCACCCTAATCGATCCCGACTTCACCCTCGACTCAGACACTGACTCC
ACACCCGAATCACCACCAGCGCCTCCGTCAGACATAACAGCCATCATAGC
CTCTCTCAAACAATGCCCCGACTATCAAATAGACCCAAACCATGTCGGCT
GCGGCATTCGCCGCCGCTTCCTCCCTCCGCTGGACTGCATAGAACGCTTC
GTCGGCGACGGACGAGGCCTCCTCGGAATCGATTTCCACTCCTGGACGGG
CCAGGAATGGCCCTTTGCAATCTCGTCCTCATGGGCTAACCGTACCCTTC
CTCGCGCAAACGTCATCGATATCCGAATTTCTAAACTGAGCGCTGTACAT
GGGGGAAGCGGTGCTCGACTCTCACTCACCTCTCAAGAAGAGAACGCCAG
GTTACTGTTTACCGCGAAAAAGAGGAACTGGGAGGCTTAGATGGACTCGG
AGGGTGCCCCAGAATCTCAACAGGAGAGTTCAATTTTTGGCATAGGGAAG
CTGTCTATAAACTCAGCCGAAGGCCATTCTGAAGTCACGCATCAGACCAA
TGGTGTGACCCATCCGTTGCCTGACTTAGAGGAGTCGACTGCTCCCTACA
AAGTCATCCTGCAGACAGGCGATGTGATCGTTGAATACTTCGATCCTGAA
TCTGATATCTCGACTAAATCCGAAGCGCGCCATCGTCGTTGGCGAGTCTC
CAGCGCTGATCTAGCGCAAAATAGCCCATATTTTCGGGCCCTTCTTGACC
CGGATAAATTCTCCGAGGGTAGACGCCTTATGCAACAGAAGATGATGCAT
CAGAAGCTCCTGGCTGACAAAATGGTGAATGCTGCGTCTTCCGACAACCA
AAATGTAGAAGTGAGCTATCTGCCTGTCGTAATCCTCCCGAGCAAACATG
TCTCATCAAGGCTTGGGTTGGATGCCATCAAACTGTTTCTGGAGATCCTG
TCCTTCAACTCCTTTGGAGAAGAACAGAAGTGTTCATTTGATGCGGAACT
AAAGTTTCTGCCCGTGTCTTTGATTGCAAGGCTACTGGAGCTATCGGATG
CCTTCAACTCTCCCCATGTCGTTCGGGAATCTCTCAAAAGAGCCGGCTAC
GCTTTCGGGAAGGGGAAATATCAACCTTCAAAATTCGACTCCTCATTACT
GAAGCTGAGTGAGGACCGCATCCGACAAACTGTTTTTGTAGCCCGAATTC
TGGATGAGCCGGTCATATATCAAGTGATGACCCATGCTCTAATACTCCTT
GGCTCGAAGTCTTGGACAAACGGTGTCGAGCCTCCAGTTACTCCTACCTA
CCCCTGGCGCTATTTCCCCAACGGTATAGAAGAGGAACTCTACTTCCGCC
GACAATGCGTTCTAAACACTATCACCGACCTCCAAGCCTACTTTCTCCGC
GTCTACGGCGCCCTAGAAGACCCCGAGCCCCCCAAACCTTTTGTCCCACG
ACAACCACTCGCACCAGCCATCAACCAAGCGCGTCCTTTCCAATGCCGCT
ACGGCTTTGGCAACTCCAGTGCCTGCGACGCCTTCCACCTAGGGCAGATG
ACGCGATTCTTTTCCCTTCGCACAAAGACCATCTTTCTCGGCTCCACCCT
AATCGATCCCGACTTCACCCTCGACTCAGACACTGACTCCACACCCGAAT
CACCACCAGCGCCTCCGTCAGACATAACAGCCATCATAGCCTCTCTCAAA
CAATGCCCCGACTATCAAATAGACCCAAACCATGTCGGCTGCGGCATTCG
CCGCCGCTTCCTCCCTCCGCTGGACTGCATAGAACGCTTCGTCGGCGACG
GACGAGGCCTCCTCGGAATCGATTTCCACTCCTGGACGGGCCAGGAATGG
CCCTTTGCAATCTCGTCCTCATGGGCTAACCGTACCCTTCCTCGCGCAAA
CGTCATCGATATCCGAATTTCTAAACTGAGCGCTGTACATGGGGGAAGCG
GTGCTCGACTCTCACTCACCTCTCAAGAAGAGAACGCCAGGTTACTGTTT
ACCGCGAAAAAGAGGAACTGGGAGGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011109-T1.utr5p1 | KJC3_011109-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011109-T1.utr3p1 | KJC3_011109-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5253183..5255503 + |
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