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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5255825..5257939- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011110-T1 ID=KJC3_011110-T1|Name=KJC3_011110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2115bp|location=Sequence derived from alignment at ch7:5255825..5257939- (Aspergillus niger KJC3)
GACATTCGTCCGTCGGGAGATTGCTGCCATCTGGGCGAAAGTTATCACTT
CTTACTAGACACCTGACCTTAATTCACACAGCCATGGTTCGATTCTGGGT
ATTCGACTGTTCCGCAGAGCTCTGCTAACAATCGCGCACAAACAACAGGT
CGTCCTCGCAGCCTCCATATGCACCCGCGGGGGCAAGGCCGTACTTTCGC
GCCAATTCCGCGAGATTGCTCGCTCAAGAATCGAGGCCTTGCTCGCTTCC
TTCCCCAAACTGGCCGATTCCGGTACTCAGCATACGACCGTGGAGCAGGA
CAATGTCCGCTTCGTATACCAGCCTCTGGACGAGCTATACATTGTCCTGA
TTACGAACCGCCAGTCGAACATCTTGCAGGACATCGACAGTCTCCACCTA
TTCGCCCAAGTCACCACCAGCATCTGTAAGAGCTTGGATGAGAGGGAGAT
TCTGCGCAATGCTTTCGAACTGCTCAGTGCCTATGATGAATTGGTCACTC
TGGGGTACAGAGAGAATCTGTCCCTTACTCAGATCAAGACCTTCCTGGAA
ATGGAGAGTCACGAGGAGAGAATCCAGGAGATTATTGAAAGAGTATACAT
ATTCCCGCCTGGCTGTAATGTCAACGGGTGGCTGACCTTGCCGGATAGAA
CAAAGAACTCGAGGCCAGCGAGGAGCGCAAAAGGAAGGCCAAGCAGCTGG
AGATGCAACGGAAAGAGGCCGCCAAAAGTGGTCGTTCTATGGCTCCCCGG
ACGCCTTCTTATCCCGTCTATACTCCCCCCTCCCGGCCAGCTGTACCCGA
TACCTACGACACCTACGAGGCGGAGAAGAAGAAGTCTTTCGCTAAGTGTG
TGCATCCATTCCTGACCTCTGCTCCTCGTCTCTAACTATCCCCAACCCCA
GGCCGTTACCCACCCGCGGCAAGGGCATGCAACTTGGCAAGAAGTCTAAA
ACCACCGACATATACGAGAAAGTGCGCGGCGATCTTGGTCCTGAAGTCGA
AGAATCTAGTCCCTTGGTGACACCACAAGCCTCGACCCCGATCGCCGAAA
AGGTATCCTCCGCCCGTGCCTCGCTGTCAACGGACCGGGATCCTGTCCAC
ATCACAATTGCAGAGACAATCTCTGCCACGCTTACACGTGAAGGTGCATT
GAAATCTTTTGAGGTGAAGGGCGATCTGCAACTCCGAATCTCCGACCCAG
CTTTCACCAAACTCAAGCTCGACCTCCACGCCAACCCCACGCATGGTGCG
CAATTCCGCACCCACCCTAATGTCGACAAAGCCGTCTTCACAAATTCTTC
CGCAATTCAATTGAAGGATACTTCGAAGAGGTTCCCGGCTAACAATTCGA
TTGGTGTGCTGCGCTGGCGTGTCGCAAGCTCTGGAGCGGACAACGCTGAG
ATCCTTCCCATCACGTTCACCGTATGGGTGAACAAGGGCTCCGACTCGAC
TACTGTCACCGTTGAGTACGAGCTGACCGGATCCGACACTCTGCGCGACG
TCGTCGTCACTATCCCCTACGGCGCTACAGAACCGGCAGTGTCCAGCTTC
GACGCCGTCTATGAAGTCTCTGGAGACAGCCTGGATTGGAACATCGGAAC
CGTGGATGAGAGCAACGCATCTGGCAGTTTCGAATTCGAGTCCACGGGCG
ACGGAGATGAAAACGAGTTCTTCCCCATGAACGTGCATTTCTCGAAGGCC
AACCCCTTCGTGGAGGTTGACGTAAACGACATCACTCTTCTGGAGATGGA
AGGCGAGAGCACTGGCTTCTCCAAGGATGTGAAGAGTGTCGCTGAGGGAT
ATGTCATCGAGTAGATTCTTTATTCATGTCTCCTTTGCTTGGGTGTATAG
AGTACTAATGACGTTCGGACTGCCCAATTGGGTTTCTGCGAGTTGTGTCT
ATGCTTTTTGACCAGGGTTCTTTATTTGTTTTATTCTCCAATATAAGCCT
CTTATTTTTACTTTCTATGTGTATTCACTACAAGATAGCTCCTTACTCCG
TTTTCCTTGCTGGTCTCACTTCTAGCACTCCACAGCGGTTGCTATTAGCA
ACTGTCAGACATACCTTAGTAAACATAGTCCAGAAGATAATAGTTCAAGT
GAAGTTACAAGGTTC back to topCoding sequence (CDS) from alignment at ch7:5255825..5257939- >KJC3_011110-T1 ID=KJC3_011110-T1|Name=KJC3_011110-T1|organism=Aspergillus niger KJC3|type=CDS|length=6228bp|location=Sequence derived from alignment at ch7:5255825..5257939- (Aspergillus niger KJC3)
GCCGTTACCCACCCGCGGCAAGGGCATGCAACTTGGCAAGAAGTCTAAAA
CCACCGACATATACGAGAAAGTGCGCGGCGATCTTGGTCCTGAAGTCGAA
GAATCTAGTCCCTTGGTGACACCACAAGCCTCGACCCCGATCGCCGAAAA
GGTATCCTCCGCCCGTGCCTCGCTGTCAACGGACCGGGATCCTGTCCACA
TCACAATTGCAGAGACAATCTCTGCCACGCTTACACGTGAAGGTGCATTG
AAATCTTTTGAGGTGAAGGGCGATCTGCAACTCCGAATCTCCGACCCAGC
TTTCACCAAACTCAAGCTCGACCTCCACGCCAACCCCACGCATGGTGCGC
AATTCCGCACCCACCCTAATGTCGACAAAGCCGTCTTCACAAATTCTTCC
GCAATTCAATTGAAGGATACTTCGAAGAGGTTCCCGGCTAACAATTCGAT
TGGTGTGCTGCGCTGGCGTGTCGCAAGCTCTGGAGCGGACAACGCTGAGA
TCCTTCCCATCACGTTCACCGTATGGGTGAACAAGGGCTCCGACTCGACT
ACTGTCACCGTTGAGTACGAGCTGACCGGATCCGACACTCTGCGCGACGT
CGTCGTCACTATCCCCTACGGCGCTACAGAACCGGCAGTGTCCAGCTTCG
ACGCCGTCTATGAAGTCTCTGGAGACAGCCTGGATTGGAACATCGGAACC
GTGGATGAGAGCAACGCATCTGGCAGTTTCGAATTCGAGTCCACGGGCGA
CGGAGATGAAAACGAGTTCTTCCCCATGAACGTGCATTTCTCGAAGGCCA
ACCCCTTCGTGGAGGTTGACGTAAACGACATCACTCTTCTGGAGATGGAA
GGCGAGAGCACTGGCTTCTCCAAGGATGTGAAGAGTGTCGCTGAGGGATA
TGTCATCGAGTAGAACAAAGAACTCGAGGCCAGCGAGGAGCGCAAAAGGA
AGGCCAAGCAGCTGGAGATGCAACGGAAAGAGGCCGCCAAAAGTGGTCGT
TCTATGGCTCCCCGGACGCCTTCTTATCCCGTCTATACTCCCCCCTCCCG
GCCAGCTGTACCCGATACCTACGACACCTACGAGGCGGAGAAGAAGAAGT
CTTTCGCTAAGTCGTCCTCGCAGCCTCCATATGCACCCGCGGGGGCAAGG
CCGTACTTTCGCGCCAATTCCGCGAGATTGCTCGCTCAAGAATCGAGGCC
TTGCTCGCTTCCTTCCCCAAACTGGCCGATTCCGGTACTCAGCATACGAC
CGTGGAGCAGGACAATGTCCGCTTCGTATACCAGCCTCTGGACGAGCTAT
ACATTGTCCTGATTACGAACCGCCAGTCGAACATCTTGCAGGACATCGAC
AGTCTCCACCTATTCGCCCAAGTCACCACCAGCATCTGTAAGAGCTTGGA
TGAGAGGGAGATTCTGCGCAATGCTTTCGAACTGCTCAGTGCCTATGATG
AATTGGTCACTCTGGGGTACAGAGAGAATCTGTCCCTTACTCAGATCAAG
ACCTTCCTGGAAATGGAGAGTCACGAGGAGAGAATCCAGGAGATTATTGA
AAGAATGGCCGTTACCCACCCGCGGCAAGGGCATGCAACTTGGCAAGAAG
TCTAAAACCACCGACATATACGAGAAAGTGCGCGGCGATCTTGGTCCTGA
AGTCGAAGAATCTAGTCCCTTGGTGACACCACAAGCCTCGACCCCGATCG
CCGAAAAGGTATCCTCCGCCCGTGCCTCGCTGTCAACGGACCGGGATCCT
GTCCACATCACAATTGCAGAGACAATCTCTGCCACGCTTACACGTGAAGG
TGCATTGAAATCTTTTGAGGTGAAGGGCGATCTGCAACTCCGAATCTCCG
ACCCAGCTTTCACCAAACTCAAGCTCGACCTCCACGCCAACCCCACGCAT
GGTGCGCAATTCCGCACCCACCCTAATGTCGACAAAGCCGTCTTCACAAA
TTCTTCCGCAATTCAATTGAAGGATACTTCGAAGAGGTTCCCGGCTAACA
ATTCGATTGGTGTGCTGCGCTGGCGTGTCGCAAGCTCTGGAGCGGACAAC
GCTGAGATCCTTCCCATCACGTTCACCGTATGGGTGAACAAGGGCTCCGA
CTCGACTACTGTCACCGTTGAGTACGAGCTGACCGGATCCGACACTCTGC
GCGACGTCGTCGTCACTATCCCCTACGGCGCTACAGAACCGGCAGTGTCC
AGCTTCGACGCCGTCTATGAAGTCTCTGGAGACAGCCTGGATTGGAACAT
CGGAACCGTGGATGAGAGCAACGCATCTGGCAGTTTCGAATTCGAGTCCA
CGGGCGACGGAGATGAAAACGAGTTCTTCCCCATGAACGTGCATTTCTCG
AAGGCCAACCCCTTCGTGGAGGTTGACGTAAACGACATCACTCTTCTGGA
GATGGAAGGCGAGAGCACTGGCTTCTCCAAGGATGTGAAGAGTGTCGCTG
AGGGATATGTCATCGAGTAGAACAAAGAACTCGAGGCCAGCGAGGAGCGC
AAAAGGAAGGCCAAGCAGCTGGAGATGCAACGGAAAGAGGCCGCCAAAAG
TGGTCGTTCTATGGCTCCCCGGACGCCTTCTTATCCCGTCTATACTCCCC
CCTCCCGGCCAGCTGTACCCGATACCTACGACACCTACGAGGCGGAGAAG
AAGAAGTCTTTCGCTAAGTCGTCCTCGCAGCCTCCATATGCACCCGCGGG
GGCAAGGCCGTACTTTCGCGCCAATTCCGCGAGATTGCTCGCTCAAGAAT
CGAGGCCTTGCTCGCTTCCTTCCCCAAACTGGCCGATTCCGGTACTCAGC
ATACGACCGTGGAGCAGGACAATGTCCGCTTCGTATACCAGCCTCTGGAC
GAGCTATACATTGTCCTGATTACGAACCGCCAGTCGAACATCTTGCAGGA
CATCGACAGTCTCCACCTATTCGCCCAAGTCACCACCAGCATCTGTAAGA
GCTTGGATGAGAGGGAGATTCTGCGCAATGCTTTCGAACTGCTCAGTGCC
TATGATGAATTGGTCACTCTGGGGTACAGAGAGAATCTGTCCCTTACTCA
GATCAAGACCTTCCTGGAAATGGAGAGTCACGAGGAGAGAATCCAGGAGA
TTATTGAAAGAATGGCCGTTACCCACCCGCGGCAAGGGCATGCAACTTGG
CAAGAAGTCTAAAACCACCGACATATACGAGAAAGTGCGCGGCGATCTTG
GTCCTGAAGTCGAAGAATCTAGTCCCTTGGTGACACCACAAGCCTCGACC
CCGATCGCCGAAAAGGTATCCTCCGCCCGTGCCTCGCTGTCAACGGACCG
GGATCCTGTCCACATCACAATTGCAGAGACAATCTCTGCCACGCTTACAC
GTGAAGGTGCATTGAAATCTTTTGAGGTGAAGGGCGATCTGCAACTCCGA
ATCTCCGACCCAGCTTTCACCAAACTCAAGCTCGACCTCCACGCCAACCC
CACGCATGGTGCGCAATTCCGCACCCACCCTAATGTCGACAAAGCCGTCT
TCACAAATTCTTCCGCAATTCAATTGAAGGATACTTCGAAGAGGTTCCCG
GCTAACAATTCGATTGGTGTGCTGCGCTGGCGTGTCGCAAGCTCTGGAGC
GGACAACGCTGAGATCCTTCCCATCACGTTCACCGTATGGGTGAACAAGG
GCTCCGACTCGACTACTGTCACCGTTGAGTACGAGCTGACCGGATCCGAC
ACTCTGCGCGACGTCGTCGTCACTATCCCCTACGGCGCTACAGAACCGGC
AGTGTCCAGCTTCGACGCCGTCTATGAAGTCTCTGGAGACAGCCTGGATT
GGAACATCGGAACCGTGGATGAGAGCAACGCATCTGGCAGTTTCGAATTC
GAGTCCACGGGCGACGGAGATGAAAACGAGTTCTTCCCCATGAACGTGCA
TTTCTCGAAGGCCAACCCCTTCGTGGAGGTTGACGTAAACGACATCACTC
TTCTGGAGATGGAAGGCGAGAGCACTGGCTTCTCCAAGGATGTGAAGAGT
GTCGCTGAGGGATATGTCATCGAGTAGAACAAAGAACTCGAGGCCAGCGA
GGAGCGCAAAAGGAAGGCCAAGCAGCTGGAGATGCAACGGAAAGAGGCCG
CCAAAAGTGGTCGTTCTATGGCTCCCCGGACGCCTTCTTATCCCGTCTAT
ACTCCCCCCTCCCGGCCAGCTGTACCCGATACCTACGACACCTACGAGGC
GGAGAAGAAGAAGTCTTTCGCTAAGTCGTCCTCGCAGCCTCCATATGCAC
CCGCGGGGGCAAGGCCGTACTTTCGCGCCAATTCCGCGAGATTGCTCGCT
CAAGAATCGAGGCCTTGCTCGCTTCCTTCCCCAAACTGGCCGATTCCGGT
ACTCAGCATACGACCGTGGAGCAGGACAATGTCCGCTTCGTATACCAGCC
TCTGGACGAGCTATACATTGTCCTGATTACGAACCGCCAGTCGAACATCT
TGCAGGACATCGACAGTCTCCACCTATTCGCCCAAGTCACCACCAGCATC
TGTAAGAGCTTGGATGAGAGGGAGATTCTGCGCAATGCTTTCGAACTGCT
CAGTGCCTATGATGAATTGGTCACTCTGGGGTACAGAGAGAATCTGTCCC
TTACTCAGATCAAGACCTTCCTGGAAATGGAGAGTCACGAGGAGAGAATC
CAGGAGATTATTGAAAGAATGGCCGTTACCCACCCGCGGCAAGGGCATGC
AACTTGGCAAGAAGTCTAAAACCACCGACATATACGAGAAAGTGCGCGGC
GATCTTGGTCCTGAAGTCGAAGAATCTAGTCCCTTGGTGACACCACAAGC
CTCGACCCCGATCGCCGAAAAGGTATCCTCCGCCCGTGCCTCGCTGTCAA
CGGACCGGGATCCTGTCCACATCACAATTGCAGAGACAATCTCTGCCACG
CTTACACGTGAAGGTGCATTGAAATCTTTTGAGGTGAAGGGCGATCTGCA
ACTCCGAATCTCCGACCCAGCTTTCACCAAACTCAAGCTCGACCTCCACG
CCAACCCCACGCATGGTGCGCAATTCCGCACCCACCCTAATGTCGACAAA
GCCGTCTTCACAAATTCTTCCGCAATTCAATTGAAGGATACTTCGAAGAG
GTTCCCGGCTAACAATTCGATTGGTGTGCTGCGCTGGCGTGTCGCAAGCT
CTGGAGCGGACAACGCTGAGATCCTTCCCATCACGTTCACCGTATGGGTG
AACAAGGGCTCCGACTCGACTACTGTCACCGTTGAGTACGAGCTGACCGG
ATCCGACACTCTGCGCGACGTCGTCGTCACTATCCCCTACGGCGCTACAG
AACCGGCAGTGTCCAGCTTCGACGCCGTCTATGAAGTCTCTGGAGACAGC
CTGGATTGGAACATCGGAACCGTGGATGAGAGCAACGCATCTGGCAGTTT
CGAATTCGAGTCCACGGGCGACGGAGATGAAAACGAGTTCTTCCCCATGA
ACGTGCATTTCTCGAAGGCCAACCCCTTCGTGGAGGTTGACGTAAACGAC
ATCACTCTTCTGGAGATGGAAGGCGAGAGCACTGGCTTCTCCAAGGATGT
GAAGAGTGTCGCTGAGGGATATGTCATCGAGTAGAACAAAGAACTCGAGG
CCAGCGAGGAGCGCAAAAGGAAGGCCAAGCAGCTGGAGATGCAACGGAAA
GAGGCCGCCAAAAGTGGTCGTTCTATGGCTCCCCGGACGCCTTCTTATCC
CGTCTATACTCCCCCCTCCCGGCCAGCTGTACCCGATACCTACGACACCT
ACGAGGCGGAGAAGAAGAAGTCTTTCGCTAAGTCGTCCTCGCAGCCTCCA
TATGCACCCGCGGGGGCAAGGCCGTACTTTCGCGCCAATTCCGCGAGATT
GCTCGCTCAAGAATCGAGGCCTTGCTCGCTTCCTTCCCCAAACTGGCCGA
TTCCGGTACTCAGCATACGACCGTGGAGCAGGACAATGTCCGCTTCGTAT
ACCAGCCTCTGGACGAGCTATACATTGTCCTGATTACGAACCGCCAGTCG
AACATCTTGCAGGACATCGACAGTCTCCACCTATTCGCCCAAGTCACCAC
CAGCATCTGTAAGAGCTTGGATGAGAGGGAGATTCTGCGCAATGCTTTCG
AACTGCTCAGTGCCTATGATGAATTGGTCACTCTGGGGTACAGAGAGAAT
CTGTCCCTTACTCAGATCAAGACCTTCCTGGAAATGGAGAGTCACGAGGA
GAGAATCCAGGAGATTATTGAAAGAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011110-T1.utr3p1 | KJC3_011110-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011110-T1.utr5p1 | KJC3_011110-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264V3H |
| DBxref | InterPro:IPR036168 |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR028565 |
| DBxref | InterPro:IPR022775 |
| DBxref | PFAM:PF01217 |
| DBxref | PFAM:PF00928 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5255825..5257939 - |
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