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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5270297..5274839+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011115-T2 ID=KJC3_011115-T2|Name=KJC3_011115-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4543bp|location=Sequence derived from alignment at ch7:5270297..5274839+ (Aspergillus niger KJC3)
CCACTACTTAGTGCCACAACCACTCAGAACTTTGGTTGCTTTGGTAGTAG
TGGTGCTAAGTAGGATTGTCCGCGGTGGCTCTGCCTCTCTCCTTTGCCTC
TCCCTCTCTCTCTTTCTCTCTCTCTCTCCCTCTTTCTCTGTCTGTGTCTC
TCCGCCAGCCAGGGGAATTTTTCTCTTGTCGTCACCGGACAGCCTTCTGG
CTCCATTGCGACTACTTTGGTCCACTTGGGAATATTTTGTGCGCTTGAGT
CGCGCTTCTACTGTTCTGAACAACGGATTATTTCTTTTCTAAATTAAATT
CCTTTGTTGATGCTTTCTGATAATATTTTATTATAATTTATCTTATTTTC
CCTTGTCTTTCAAATTTTTTCTATATTTTTTTTTTCTCTCTTAGCCTTTC
CGGGGAAGAAGGGGCTGGAGCCGCTTCCCACAAGTTCACGGCGGGGTTTC
TTTGGGCTACACAACGTACCCTTCCACCCTCTCGGTCTCTCCCTCTCTCC
CTCTCTCTCTGTCTCTCTCTTCATCCCCCCTCGTCGTCCTTCTTCCCGCA
ATTGCTCCCCCTCCCTCTGCCTTCCACCTTTGCGACACCATGGAATGGCA
ACCGCAGGACGATCCATTGAGGCAGCTGGCTTGCTGCCTCAAGGATTCCC
TTAATCCTTATGATCGCCCCCTCCAAAAACAGGCCGAACAGGTGTGTCCT
CGCTGTCGCTTTTCCCCCTCTCTCTTAGTCCGCTTTCTTTCCCGACTTTA
AGTTTTTTTTTTATGCTTCCCCTCCCCTCCATCAACTTCAACAGAATGGC
TATTTCCGGAGCTTCGCGGTCGCTGCAACAGCACCTATTCTACCTCGCCT
TCTGTTTAGCTTTGCTCTAGGACCTTATCTTTCGCTTTGAGAAAAAAAAA
AAATCGGCTGACCGGAGCTCTCTTTCTGCCGTCTGATAGATGCTAGTACA
AGCAACTTCGTCGCCGGATTATGTCAACTACATCACCTACCTCTTCAGCA
CCCCGCAGGCTTCTCCGGTGCTGGGAATGGATAGCCAGACCTACGACATG
GTCCGTTTCGCCGCTGCCATGAACCTCAAGACCAAAATTCACGTTGCCTA
CAACACGATCCCCCAACCTTGCTTGACCTATATCCGATCGGCCACCCTGC
TCGGATTGCGCGATGAGAACCCTCATGTGCGGAAGTCGGCCGGAACAATT
ATCACAGAATTGGTGCAACAGGCGGGGCTATTAGCCTGGCCTGACGTGCT
GCAGGAGCTGCTGACCCTCGTCGAAAATAGCTCCGGTGACATCCCGCCCA
TGGCCCAGGAGGCTGCGATGTCTGCTCTTTCCAAGGTTTGCGAAGATAAC
CGCAAGATCCTCGACCGTGACTACCAAGGACAATGCCCTCTCGATGTCAT
CATCCCCAAGTTGCTCGAATTCACCTCGAACCAGAGCTCCAAGGTCCGCT
CAATGGCCCTCGGCACCATCCACGTCTTCCTCCCGCACAGACCCAAGGCC
CTGATTGCTTCAATGGATCTGTTTTTGTCGCAATTGTTCCAGCTCGCCAA
TGATTCGAGTACCGATGTTCGTCGCACAGTGTGTCAGACTTTCGCGCAAC
TGGTGGACTTCTCCCCCGAGAAGCTCATCCCACACATGGAAGGCTTGGTC
AACTATATCATCATGCAACAGCACAACCAGGAGGATCCGGAGCTTGCGCT
TGACGCCGCTGAGTTCTGGCTTGTCGCGGGCGAGCAGATCAAATTGCAGC
AGCCCTTGGCTCCACACATGTCTAAGATCGTCCCGGTCTTGCTCCAGAGC
ATGGTTTATGATGAGGATGAAGCCATTAGGTTGACGGGCGAAGGAGATGA
TGCCGAGGACGAAGACCGCCAGGAAGACCTCAAACCACAGTTCGCCAAGT
CCAAGAGCGGTAAATTGGATATGTCCAAGTCCGGTCAAGCGAATGGAAAC
GCAGCTCCCGAGGAGGAAGACGATGACGACCTGAGTGAAGGCGAGATCGA
GGATTCCGAATTCGGAGATGATCCCGAGGACGAATGGACGCTCAGAAAGT
GCTCCGCCGCCGCGTTGGATGTCTTCTCGAACGTCTATCACGACCCGATC
TTCGAAATCATTCTGCCCTACCTGAAGGAGACCCTCCGCCACGAGCAGTG
GCCCCATCGCGAAGCTGCTGTCTTGACTCTGGGTGCTGTTGCAGACGGTT
GTATGGATGCGGTTACGCCTCATCTCCCCGAGCTCGTTCCCTACCTCATT
TCCCTGCTCAACGACGCTCAACCTGTGGTGCGACAGATCACCTGTTGGTG
CCTCGGCCGATACTCCGAATGGGCGTCACACCTGGGAGACCCGTCGGAAA
GAGCGCGCTTCTTTGAGCCTATGATGGAGGGTATCCTGCGCAGAATGCTG
GACGGCAACAAGAAGGTTCAGGAGGCGGCTGCCTCTGCCTTTGCAAGCTT
GGAGGAGAAGTCGGACGCGAACTTGATCCCCTACTGTGAGCCCATCCTTC
GACAGTTTGTGCAGTGCTTTGGAAGGTACAAAGACCGGAACATGTACATC
TTGTATGACTGTGTCCAAACTTTGGCCGAGTGCGTCATGGGGGAGCTGGC
GAAGCCTCAACTGGTTGATATCCTTATGCCTGCTCTCATTGATCGCTACA
ACAAGGTCTCGGATCAGTCTCGGGAGCTGTTCCCGCTCCTGGAGTGCCTG
GGATACATTGCGGCGGCCTACGGCGACGCCTTTTCTCCCTTCGCCACTCC
TCTCTTCCAGAGATGCATCAAGATCATCTACGAAAACCTGCAGGAGTACA
TGGCATCTGTCAACAACCAGGCCATCGATGAGCCTGACAAGGACTTCCTG
GTGACGAGCCTGGATCTTCTGAGCGCGATCATCCAGGCGATCGATCCGCA
GAAGAGTGGCGAGTTGGTCGCCAACTCCCAGCCCCGGTTCTTCGACCTGC
TCTGCTTCTGTATGGAGGATCCGAACTATGAGGTCCGTCAGTCATCGTAT
GCTCTGCTGGGTGACTGTGCGATCAACATCTTCCCTCAACTCGAGCCCTT
CATTCCTAACATTATGCCTACTCTGATCAAGCAACTGGATCTGGACCAGA
TCCGGGATGATGATCGTCACACTGGATTCAGCGTTCTCAACAATGCCTGC
TGGTCGTGCGGAGAGATCGCCGTGAACGAAAAAGCCGCGCTGGCTCCGTA
TATGGAAAAGCTGTACCAGGGGCTTTTCATCATCATCAACAACGAGGAGA
TCATCGACTCGGTGAACGAGAACGCTGCGATGGCGCTGGGTCGGCTTGGT
ATCTGCTGCTCCGATCAGCTTGCAGCTCGTCTGAATGAATACGCCGGAGT
CTTCTTGAAGTCCATGAACAAGATTGAGTTCACGCGCGAAAAGGCATCCG
CTTTCCTCGGATTCAATCAGGTGGTGATGAAGAACCCCGCAGCCATGGAG
TCCTGCCTGGTGGACTACTTCCAGGCCATCGCTGCATTCCCCACCAAATC
GATGAACCAGGAGGACTACCGTGACATTCAGACCTCATTCCAGCAGGTGT
GTAACCTTCTCTTTCCCTCATATCTTTCAAAACGTGTAGCTGACTCGAAT
GATGATGCAGGTGTTGCAGGGATATAAAAATATGATACCCAATTTCGATT
CATTCCTGTCGCAACTTCCGGCCCATGTTGCTCAGAAGCTTCGTTCTGTA
TACCAGATTTAGATCTATATGTTTGTCATGTTAATGTTTCGTTTGAACGC
AAAATGTCATGGCGAAAGGCGCATAAAATTGCATTTCCTTTTCCTTCTCC
CACGCCGGCACCTGGCTCGGTGATTGTCTGCTTCCGATTCCTGGCCGGGA
TCAAGGACCTTTCTCCGGGCGGAGGGAGTGTGGTTGAGAACACACCGTCC
GATGTTCAAGCCTTGATGTGGCGTGTTTGGAATCTGTTTTCATTCGACTG
TGCGTGGATCGCCGTGTCGGGGTCTGCATAGAGGGAGGGCTAATGGGCTG
GCTGGACCGTGGGCAACCAAAATAAAAATAGGGACAAAACGAAAAGAGCA
AAAAGCGGATGGACATGAACCCCTGGAATAGTATAGCTCGGGACTATATA
ACCAGGATGAAGAAAGGGCAAGGGGAAATGAACAATGAGACATGCCTATC
GATCCTGTACCCTTTTTATTCCCTTTTTTATTTCTTTTATATTTTTTGTT
TTAGATAGACTAGTAGAATAGTATATTAGATAGGATAGTCTGATGCACGC
AGGAGGGTCGGCTGGCACCTGCTGTGTGTTTTTCAATCTGGCGTTGTTCT
TCTTTTTATTTTACCCTCATGAAGTGAAGTTTATTTTATCTGCAAGTGAT
GATGTGGGGGACATGGTCTATATATCTACACGAGTGATGTATATAAATTG
AGTTTGACATCATGATCGACAGACAGATGCCATTTACTCAGTGATGCAGC
CAGTAGCTACCTAGCTAGCTAGTTGGTCCGATCCACATGACAGTATCACT
ATCAACAAAGAGCAAACTAACCTAATACTACTTACTGAAGAAC back to topCoding sequence (CDS) from alignment at ch7:5270297..5274839+ >KJC3_011115-T2 ID=KJC3_011115-T2|Name=KJC3_011115-T2|organism=Aspergillus niger KJC3|type=CDS|length=5418bp|location=Sequence derived from alignment at ch7:5270297..5274839+ (Aspergillus niger KJC3)
ATGCTAGTACAAGCAACTTCGTCGCCGGATTATGTCAACTACATCACCTA
CCTCTTCAGCACCCCGCAGGCTTCTCCGGTGCTGGGAATGGATAGCCAGA
CCTACGACATGGTCCGTTTCGCCGCTGCCATGAACCTCAAGACCAAAATT
CACGTTGCCTACAACACGATCCCCCAACCTTGCTTGACCTATATCCGATC
GGCCACCCTGCTCGGATTGCGCGATGAGAACCCTCATGTGCGGAAGTCGG
CCGGAACAATTATCACAGAATTGGTGCAACAGGCGGGGCTATTAGCCTGG
CCTGACGTGCTGCAGGAGCTGCTGACCCTCGTCGAAAATAGCTCCGGTGA
CATCCCGCCCATGGCCCAGGAGGCTGCGATGTCTGCTCTTTCCAAGGTTT
GCGAAGATAACCGCAAGATCCTCGACCGTGACTACCAAGGACAATGCCCT
CTCGATGTCATCATCCCCAAGTTGCTCGAATTCACCTCGAACCAGAGCTC
CAAGGTCCGCTCAATGGCCCTCGGCACCATCCACGTCTTCCTCCCGCACA
GACCCAAGGCCCTGATTGCTTCAATGGATCTGTTTTTGTCGCAATTGTTC
CAGCTCGCCAATGATTCGAGTACCGATGTTCGTCGCACAGTGTGTCAGAC
TTTCGCGCAACTGGTGGACTTCTCCCCCGAGAAGCTCATCCCACACATGG
AAGGCTTGGTCAACTATATCATCATGCAACAGCACAACCAGGAGGATCCG
GAGCTTGCGCTTGACGCCGCTGAGTTCTGGCTTGTCGCGGGCGAGCAGAT
CAAATTGCAGCAGCCCTTGGCTCCACACATGTCTAAGATCGTCCCGGTCT
TGCTCCAGAGCATGGTTTATGATGAGGATGAAGCCATTAGGTTGACGGGC
GAAGGAGATGATGCCGAGGACGAAGACCGCCAGGAAGACCTCAAACCACA
GTTCGCCAAGTCCAAGAGCGGTAAATTGGATATGTCCAAGTCCGGTCAAG
CGAATGGAAACGCAGCTCCCGAGGAGGAAGACGATGACGACCTGAGTGAA
GGCGAGATCGAGGATTCCGAATTCGGAGATGATCCCGAGGACGAATGGAC
GCTCAGAAAGTGCTCCGCCGCCGCGTTGGATGTCTTCTCGAACGTCTATC
ACGACCCGATCTTCGAAATCATTCTGCCCTACCTGAAGGAGACCCTCCGC
CACGAGCAGTGGCCCCATCGCGAAGCTGCTGTCTTGACTCTGGGTGCTGT
TGCAGACGGTTGTATGGATGCGGTTACGCCTCATCTCCCCGAGCTCGTTC
CCTACCTCATTTCCCTGCTCAACGACGCTCAACCTGTGGTGCGACAGATC
ACCTGTTGGTGCCTCGGCCGATACTCCGAATGGGCGTCACACCTGGGAGA
CCCGTCGGAAAGAGCGCGCTTCTTTGAGCCTATGATGGAGGGTATCCTGC
GCAGAATGCTGGACGGCAACAAGAAGGTTCAGGAGGCGGCTGCCTCTGCC
TTTGCAAGCTTGGAGGAGAAGTCGGACGCGAACTTGATCCCCTACTGTGA
GCCCATCCTTCGACAGTTTGTGCAGTGCTTTGGAAGGTACAAAGACCGGA
ACATGTACATCTTGTATGACTGTGTCCAAACTTTGGCCGAGTGCGTCATG
GGGGAGCTGGCGAAGCCTCAACTGGTTGATATCCTTATGCCTGCTCTCAT
TGATCGCTACAACAAGGTCTCGGATCAGTCTCGGGAGCTGTTCCCGCTCC
TGGAGTGCCTGGGATACATTGCGGCGGCCTACGGCGACGCCTTTTCTCCC
TTCGCCACTCCTCTCTTCCAGAGATGCATCAAGATCATCTACGAAAACCT
GCAGGAGTACATGGCATCTGTCAACAACCAGGCCATCGATGAGCCTGACA
AGGACTTCCTGGTGACGAGCCTGGATCTTCTGAGCGCGATCATCCAGGCG
ATCGATCCGCAGAAGAGTGGCGAGTTGGTCGCCAACTCCCAGCCCCGGTT
CTTCGACCTGCTCTGCTTCTGTATGGAGGATCCGAACTATGAGGTCCGTC
AGTCATCGTATGCTCTGCTGGGTGACTGTGCGATCAACATCTTCCCTCAA
CTCGAGCCCTTCATTCCTAACATTATGCCTACTCTGATCAAGCAACTGGA
TCTGGACCAGATCCGGGATGATGATCGTCACACTGGATTCAGCGTTCTCA
ACAATGCCTGCTGGTCGTGCGGAGAGATCGCCGTGAACGAAAAAGCCGCG
CTGGCTCCGTATATGGAAAAGCTGTACCAGGGGCTTTTCATCATCATCAA
CAACGAGGAGATCATCGACTCGGTGAACGAGAACGCTGCGATGGCGCTGG
GTCGGCTTGGTATCTGCTGCTCCGATCAGCTTGCAGCTCGTCTGAATGAA
TACGCCGGAGTCTTCTTGAAGTCCATGAACAAGATTGAGTTCACGCGCGA
AAAGGCATCCGCTTTCCTCGGATTCAATCAGGTGGTGATGAAGAACCCCG
CAGCCATGGAGTCCTGCCTGGTGGACTACTTCCAGGCCATCGCTGCATTC
CCCACCAAATCGATGAACCAGGAGGACTACCGTGACATTCAGACCTCATT
CCAGCAGGTGTTGCAGGGATATAAAAATATGATACCCAATTTCGATTCAT
TCCTGTCGCAACTTCCGGCCCATGTTGCTCAGAAGCTTCGTTCTGTATAC
CAGATTTAGATGCTAGTACAAGCAACTTCGTCGCCGGATTATGTCAACTA
CATCACCTACCTCTTCAGCACCCCGCAGGCTTCTCCGGTGCTGGGAATGG
ATAGCCAGACCTACGACATGGTCCGTTTCGCCGCTGCCATGAACCTCAAG
ACCAAAATTCACGTTGCCTACAACACGATCCCCCAACCTTGCTTGACCTA
TATCCGATCGGCCACCCTGCTCGGATTGCGCGATGAGAACCCTCATGTGC
GGAAGTCGGCCGGAACAATTATCACAGAATTGGTGCAACAGGCGGGGCTA
TTAGCCTGGCCTGACGTGCTGCAGGAGCTGCTGACCCTCGTCGAAAATAG
CTCCGGTGACATCCCGCCCATGGCCCAGGAGGCTGCGATGTCTGCTCTTT
CCAAGGTTTGCGAAGATAACCGCAAGATCCTCGACCGTGACTACCAAGGA
CAATGCCCTCTCGATGTCATCATCCCCAAGTTGCTCGAATTCACCTCGAA
CCAGAGCTCCAAGGTCCGCTCAATGGCCCTCGGCACCATCCACGTCTTCC
TCCCGCACAGACCCAAGGCCCTGATTGCTTCAATGGATCTGTTTTTGTCG
CAATTGTTCCAGCTCGCCAATGATTCGAGTACCGATGTTCGTCGCACAGT
GTGTCAGACTTTCGCGCAACTGGTGGACTTCTCCCCCGAGAAGCTCATCC
CACACATGGAAGGCTTGGTCAACTATATCATCATGCAACAGCACAACCAG
GAGGATCCGGAGCTTGCGCTTGACGCCGCTGAGTTCTGGCTTGTCGCGGG
CGAGCAGATCAAATTGCAGCAGCCCTTGGCTCCACACATGTCTAAGATCG
TCCCGGTCTTGCTCCAGAGCATGGTTTATGATGAGGATGAAGCCATTAGG
TTGACGGGCGAAGGAGATGATGCCGAGGACGAAGACCGCCAGGAAGACCT
CAAACCACAGTTCGCCAAGTCCAAGAGCGGTAAATTGGATATGTCCAAGT
CCGGTCAAGCGAATGGAAACGCAGCTCCCGAGGAGGAAGACGATGACGAC
CTGAGTGAAGGCGAGATCGAGGATTCCGAATTCGGAGATGATCCCGAGGA
CGAATGGACGCTCAGAAAGTGCTCCGCCGCCGCGTTGGATGTCTTCTCGA
ACGTCTATCACGACCCGATCTTCGAAATCATTCTGCCCTACCTGAAGGAG
ACCCTCCGCCACGAGCAGTGGCCCCATCGCGAAGCTGCTGTCTTGACTCT
GGGTGCTGTTGCAGACGGTTGTATGGATGCGGTTACGCCTCATCTCCCCG
AGCTCGTTCCCTACCTCATTTCCCTGCTCAACGACGCTCAACCTGTGGTG
CGACAGATCACCTGTTGGTGCCTCGGCCGATACTCCGAATGGGCGTCACA
CCTGGGAGACCCGTCGGAAAGAGCGCGCTTCTTTGAGCCTATGATGGAGG
GTATCCTGCGCAGAATGCTGGACGGCAACAAGAAGGTTCAGGAGGCGGCT
GCCTCTGCCTTTGCAAGCTTGGAGGAGAAGTCGGACGCGAACTTGATCCC
CTACTGTGAGCCCATCCTTCGACAGTTTGTGCAGTGCTTTGGAAGGTACA
AAGACCGGAACATGTACATCTTGTATGACTGTGTCCAAACTTTGGCCGAG
TGCGTCATGGGGGAGCTGGCGAAGCCTCAACTGGTTGATATCCTTATGCC
TGCTCTCATTGATCGCTACAACAAGGTCTCGGATCAGTCTCGGGAGCTGT
TCCCGCTCCTGGAGTGCCTGGGATACATTGCGGCGGCCTACGGCGACGCC
TTTTCTCCCTTCGCCACTCCTCTCTTCCAGAGATGCATCAAGATCATCTA
CGAAAACCTGCAGGAGTACATGGCATCTGTCAACAACCAGGCCATCGATG
AGCCTGACAAGGACTTCCTGGTGACGAGCCTGGATCTTCTGAGCGCGATC
ATCCAGGCGATCGATCCGCAGAAGAGTGGCGAGTTGGTCGCCAACTCCCA
GCCCCGGTTCTTCGACCTGCTCTGCTTCTGTATGGAGGATCCGAACTATG
AGGTCCGTCAGTCATCGTATGCTCTGCTGGGTGACTGTGCGATCAACATC
TTCCCTCAACTCGAGCCCTTCATTCCTAACATTATGCCTACTCTGATCAA
GCAACTGGATCTGGACCAGATCCGGGATGATGATCGTCACACTGGATTCA
GCGTTCTCAACAATGCCTGCTGGTCGTGCGGAGAGATCGCCGTGAACGAA
AAAGCCGCGCTGGCTCCGTATATGGAAAAGCTGTACCAGGGGCTTTTCAT
CATCATCAACAACGAGGAGATCATCGACTCGGTGAACGAGAACGCTGCGA
TGGCGCTGGGTCGGCTTGGTATCTGCTGCTCCGATCAGCTTGCAGCTCGT
CTGAATGAATACGCCGGAGTCTTCTTGAAGTCCATGAACAAGATTGAGTT
CACGCGCGAAAAGGCATCCGCTTTCCTCGGATTCAATCAGGTGGTGATGA
AGAACCCCGCAGCCATGGAGTCCTGCCTGGTGGACTACTTCCAGGCCATC
GCTGCATTCCCCACCAAATCGATGAACCAGGAGGACTACCGTGACATTCA
GACCTCATTCCAGCAGGTGTTGCAGGGATATAAAAATATGATACCCAATT
TCGATTCATTCCTGTCGCAACTTCCGGCCCATGTTGCTCAGAAGCTTCGT
TCTGTATACCAGATTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011115-T2.utr5p1 | KJC3_011115-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011115-T2.utr3p1 | KJC3_011115-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | PFAM:PF13513 |
| DBxref | PFAM:PF02985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5270297..5274839 + |
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