You are here

Home

KJC3_011117-T1, KJC3_011117-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011117-T1
Unique NameKJC3_011117-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5287662..5289403-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011117-T1 ID=KJC3_011117-T1|Name=KJC3_011117-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1742bp|location=Sequence derived from alignment at ch7:5287662..5289403- (Aspergillus niger KJC3)
CTTCAACTCATCCCCACGTTGTACCGTTGTCACTCTCTTTCACTCTCAAC
TTCTGCAGAGATCATTCCAGAACTAGTTCATCGATTTTCATTCTTCCCTG
TATCTGAGATGACGTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGAT
GCCGGTAACAGAGGCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGG
CTACAGGCACATCGACACCGCCACTGCCTATGGAAACGAAATAGAGGTCG
GTGAAGCCATCAAGGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACC
ACCAAGCTGTAAACACTTGCGTGCCTGTGTCTGCAACCCGGGATGCTGAC
TCTTTGTTCAGAGCTCAGACGTGGCACCGTGTTTCCGACGTTGAGAGAGC
ACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGGTCTGTCTATGC
ACCTGTATTCTGCTTCAAGGTATCTTGCTGATTGCCTTCATGGATAGTCG
ACCTGTATTTGATGCATTGTATGGCGAAAGAAGATCCCTTCTCCGCCTAA
CGCCCACTAATAGCTACTCAGTTCCCCATGCATACAGCCCTGGACCGGAT
AACAACACAATCCGTCATCCTAATGGAAAGGTATACCCCTGACAGTTCTT
CTATCATACTCGTGCGGTTTACTAAGTCATTCCTCAGCCCATAATTGACC
ACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCCATGGAGAGCCTG
GTCGATAAAGGAAAAGCGAAAATGATTGGTATGCATGTACTATCTAACAT
GGAATGCAGACACTAATGATTCCTAGGAGTCTCCAACTTCAATATCTTGA
AGCTCGAGAGACTTCTCGGGTCAGCCAGGATTCCTCCTGCAGTCAACCAG
ATCGAACTTCACCCGTAAGTGCTCAATCTGTCCTACTATGTACTTTTGGA
TTGACTTACGGTCCGGTAGTTATTTACCCCAAGTTGAGCTCGTGAGGTTC
TGCAAAGCCAATGGCATTTACTTAGTGGCTCATCAGCCACTCGGCGGCAA
GCCAGTAGCAGCTGTCAACCCCAACGCAGACCGACCAGGTCCGTTGAATG
ATCCAGATGAAAGTTTCCCTAAGTGCATGTGACAACCATCGCGACTAATA
GCTACAAGATAGCCGAAATAGCCTCGAAACATGAGCGTTCTCCGGCCCAA
ATAATACTATCCTGGATCGTCCAACAAGGTATATCTGTGATTCCAAAGAC
AGTCCGACAAAGCAGAATGGTAGAGAACCTCGACCTAAAACAGTTGCCAG
ATAAGGACATGGAAACAATATACGATCTTTCGAAGAAGAAAGGAGAAGTC
CGCTACCTCGATCCGAAGAACCACATTGGCTTCAATATTTTTGATGAGCG
ACACGATCAGCCAGTACAGGAGTGATCAACTAGGCCCCAGTGTTGCATGC
GCAGATGCCTGGATGGATTTACCAACATAGATAGAGACTGCCTACACTAG
TGCGTGTCACTTCTGGTTAGCTACGGAAGGATTCCGCCGCCCTGATATGA
TATCAGACTGGTCTGTAAATGCGACAACAGAAGGATAGATAATCCCGCAG
TACCCCTCATCTAAAGCTTTGATGTCGTTTCAGATGTCCAACACAGCACA
ACACAGCCTACCTCTTCCGCTGTCATAGAATCAGGAATATGACTGGAAAC
CAACAGATATTGAACAATCTAGCTAAGCGAAATAAAACGCGC
back to top

Coding sequence (CDS) from alignment at ch7:5287662..5289403-

>KJC3_011117-T1 ID=KJC3_011117-T1|Name=KJC3_011117-T1|organism=Aspergillus niger KJC3|type=CDS|length=4893bp|location=Sequence derived from alignment at ch7:5287662..5289403- (Aspergillus niger KJC3)
TTATTTACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTT
ACTTAGTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAAC
CCCAACGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCC
TAAGTGCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACT
TCTCGGGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACC
CCCCATAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAG
CCATGGAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCAT
GCATACAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAA
GTCGACCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGAC
GTTGAGAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGA
TGACGTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAAC
AGAGGCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCA
CATCGACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCA
TCAAGGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTT
TATTTACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTA
CTTAGTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACC
CCAACGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCT
AAGTGCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTT
CTCGGGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCC
CCCATAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGC
CATGGAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATG
CATACAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAG
TCGACCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACG
TTGAGAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGAT
GACGTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACA
GAGGCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCAC
ATCGACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCAT
CAAGGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTTT
ATTTACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTAC
TTAGTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACCC
CAACGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCTA
AGTGCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTTC
TCGGGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCCC
CCATAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCC
ATGGAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATGC
ATACAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAGT
CGACCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACGT
TGAGAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGATG
ACGTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACAG
AGGCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCACA
TCGACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCATC
AAGGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTTTA
TTTACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTACT
TAGTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACCCC
AACGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCTAA
GTGCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTTCT
CGGGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCCCC
CATAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCCA
TGGAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATGCA
TACAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAGTC
GACCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACGTT
GAGAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGATGA
CGTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACAGA
GGCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCACAT
CGACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCATCA
AGGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTTTAT
TTACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTACTT
AGTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACCCCA
ACGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCTAAG
TGCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTTCTC
GGGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCCCCC
ATAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCCAT
GGAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATGCAT
ACAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAGTCG
ACCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACGTTG
AGAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGATGAC
GTTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACAGAG
GCGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCACATC
GACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCATCAA
GGAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTTTATT
TACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTACTTA
GTGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACCCCAA
CGCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCTAAGT
GCATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTTCTCG
GGTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCCCCCA
TAATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCCATG
GAGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATGCATA
CAGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAGTCGA
CCTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACGTTGA
GAGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGATGACG
TTTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACAGAGG
CGTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCACATCG
ACACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCATCAAG
GAGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCTTTATTT
ACCCCAAGTTGAGCTCGTGAGGTTCTGCAAAGCCAATGGCATTTACTTAG
TGGCTCATCAGCCACTCGGCGGCAAGCCAGTAGCAGCTGTCAACCCCAAC
GCAGACCGACCAGGTCCGTTGAATGATCCAGATGAAAGTTTCCCTAAGTG
CATGTGAGAGTCTCCAACTTCAATATCTTGAAGCTCGAGAGACTTCTCGG
GTCAGCCAGGATTCCTCCTGCAGTCAACCAGATCGAACTTCACCCCCCAT
AATTGACCACGAACTGTCAAGAGACTATCCATCGACATGGGCAGCCATGG
AGAGCCTGGTCGATAAAGGAAAAGCGAAAATGATTGTTCCCCATGCATAC
AGCCCTGGACCGGATAACAACACAATCCGTCATCCTAATGGAAAGTCGAC
CTGTATTTGATGCATTAGCTCAGACGTGGCACCGTGTTTCCGACGTTGAG
AGAGCACTCGACCTCAGCTTGGAGAGGCTTCAATTGAACTATGATGACGT
TTCCAGCTGTCGGTCTAGGTACCTTTCAAGGTGATGCCGGTAACAGAGGC
GTCAAAGAGGCTGTTCTACAAGCACTGCGTTGCGGCTACAGGCACATCGA
CACCGCCACTGCCTATGGAAACGAAATAGAGGTCGGTGAAGCCATCAAGG
AGAGCAGAATACCTCGAGAAGAGATCATTGTTACCACCAAGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011117KJC3_011117Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011117-T1KJC3_011117-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011117-T1.cdsKJC3_011117-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011117-T1.utr3p2KJC3_011117-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_011117-T1.utr3p1KJC3_011117-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011117-T1.exon8KJC3_011117-T1.exon8Aspergillus niger KJC3exon
KJC3_011117-T1.exon7KJC3_011117-T1.exon7Aspergillus niger KJC3exon
KJC3_011117-T1.exon6KJC3_011117-T1.exon6Aspergillus niger KJC3exon
KJC3_011117-T1.exon5KJC3_011117-T1.exon5Aspergillus niger KJC3exon
KJC3_011117-T1.exon4KJC3_011117-T1.exon4Aspergillus niger KJC3exon
KJC3_011117-T1.exon3KJC3_011117-T1.exon3Aspergillus niger KJC3exon
KJC3_011117-T1.exon2KJC3_011117-T1.exon2Aspergillus niger KJC3exon
KJC3_011117-T1.exon1KJC3_011117-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011117-T1.utr5p1KJC3_011117-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5287662..5289403 -
Powered by Drupal