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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5300112..5300989+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011122-T1 ID=KJC3_011122-T1|Name=KJC3_011122-T1|organism=Aspergillus niger KJC3|type=mRNA|length=878bp|location=Sequence derived from alignment at ch7:5300112..5300989+ (Aspergillus niger KJC3)
GCTAATTTTAAGGTCCGTCTCTTGGAGCTTATATAGACTTGAAAGGATCC
GTTGGAATTGTGTTCCTGGATGTTCCTGGCTAAGTCACTTGCGCTTCAAC
CATCCCTCATGCGTTATCTCTCCCTGGTATCCGCCCTCGCAGCCACCGCG
CTGGCCCAGACACCCCCGGGCAGCTACCCATCCACCAACAAGAACTTCGG
TGTCGCCTTTCCCAATGCCACTGTGACCCCTGGTACCTGGGTGAGCCCAG
ATGGTACGTACTCTGTCTCTTCACAGCTTTATAGCCTTAACACTAATTAC
AAGTGTAGACGTCACCAGCCAGCCGGCCGTGTATGTCACCGACAAGCTAA
ACAAGGATGCCACCTACATGATCTTCATGCTTGATCTCAACATCCCTGAT
TCGGACGTCACCACCGCCGCCTACTACAACACTCTTGTCCCCGGCCTGGC
TGTCAACACCACCACCCGCCTGCACTGGTGGGGTGGCAACTACACTATTC
AGAACGGACGCTTCGTCAACGCCAGCGATGCCCTGGCTGAGTATACGGCT
CCTCGCCCCCGCGACAGCACCAACCACACCTACACGCTGTATCTTTTTGA
TCAGCCGGAGGGATATGTGCCTCCCGAGAAGGCCTTGGACGGGACTTATT
ACTCCCAGACCACGTCGGCGCGGTTCAACTTCACCCTGGAGCCGATTGTG
AAGGCTGTTGGGGGGCCAATTGCGGCGAATTACTTCTTGAGTGATGCTTA
GACTACGATTTTGTTGAATTTCAAAGCTAGGTATACAAGGTCTGCATGTA
AGAGGTCTTTTAAGGGATTCACATAATGCGGCACCTGGTCACGTTTTGTA
TCAATATATCTTTTGATTTATTAATTGC back to topCoding sequence (CDS) from alignment at ch7:5300112..5300989+ >KJC3_011122-T1 ID=KJC3_011122-T1|Name=KJC3_011122-T1|organism=Aspergillus niger KJC3|type=CDS|length=1254bp|location=Sequence derived from alignment at ch7:5300112..5300989+ (Aspergillus niger KJC3)
ATGTTCCTGGCTAAGTCACTTGCGCTTCAACCATCCCTCATGCGTTATCT
CTCCCTGGTATCCGCCCTCGCAGCCACCGCGCTGGCCCAGACACCCCCGG
GCAGCTACCCATCCACCAACAAGAACTTCGGTGTCGCCTTTCCCAATGCC
ACTGTGACCCCTGGTACCTGGGTGAGCCCAGATGACGTCACCAGCCAGCC
GGCCGTGTATGTCACCGACAAGCTAAACAAGGATGCCACCTACATGATCT
TCATGCTTGATCTCAACATCCCTGATTCGGACGTCACCACCGCCGCCTAC
TACAACACTCTTGTCCCCGGCCTGGCTGTCAACACCACCACCCGCCTGCA
CTGGTGGGGTGGCAACTACACTATTCAGAACGGACGCTTCGTCAACGCCA
GCGATGCCCTGGCTGAGTATACGGCTCCTCGCCCCCGCGACAGCACCAAC
CACACCTACACGCTGTATCTTTTTGATCAGCCGGAGGGATATGTGCCTCC
CGAGAAGGCCTTGGACGGGACTTATTACTCCCAGACCACGTCGGCGCGGT
TCAACTTCACCCTGGAGCCGATTGTGAAGGCTGTTGGGGGGCCAATTGCG
GCGAATTACTTCTTGAGTGATGCTTAGATGTTCCTGGCTAAGTCACTTGC
GCTTCAACCATCCCTCATGCGTTATCTCTCCCTGGTATCCGCCCTCGCAG
CCACCGCGCTGGCCCAGACACCCCCGGGCAGCTACCCATCCACCAACAAG
AACTTCGGTGTCGCCTTTCCCAATGCCACTGTGACCCCTGGTACCTGGGT
GAGCCCAGATGACGTCACCAGCCAGCCGGCCGTGTATGTCACCGACAAGC
TAAACAAGGATGCCACCTACATGATCTTCATGCTTGATCTCAACATCCCT
GATTCGGACGTCACCACCGCCGCCTACTACAACACTCTTGTCCCCGGCCT
GGCTGTCAACACCACCACCCGCCTGCACTGGTGGGGTGGCAACTACACTA
TTCAGAACGGACGCTTCGTCAACGCCAGCGATGCCCTGGCTGAGTATACG
GCTCCTCGCCCCCGCGACAGCACCAACCACACCTACACGCTGTATCTTTT
TGATCAGCCGGAGGGATATGTGCCTCCCGAGAAGGCCTTGGACGGGACTT
ATTACTCCCAGACCACGTCGGCGCGGTTCAACTTCACCCTGGAGCCGATT
GTGAAGGCTGTTGGGGGGCCAATTGCGGCGAATTACTTCTTGAGTGATGC
TTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011122-T1.utr5p1 | KJC3_011122-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011122-T1.utr3p1 | KJC3_011122-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-29) |
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR036610 |
| DBxref | InterPro:IPR008914 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5300112..5300989 + |
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