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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5312825..5315286- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011129-T1 ID=KJC3_011129-T1|Name=KJC3_011129-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2462bp|location=Sequence derived from alignment at ch7:5312825..5315286- (Aspergillus niger KJC3)
CCTAAATCCGGATGCAATCCTAGTATTGACACTAACTGGACCGGTCAATT
AATAATACAGATAGAGTTATTTCAACCTCACCTTCCAGGTTGATAACGCA
CCCCAAATTGGCCTCATCAACAATTGTTCTACCATCATCATGTCCTTGGT
GCAGGCCCTTCACTACGAGGTTACAGCTCCTGCGTCGTCGTTGTCGCATC
CAGCGGTCCCGTCCCCTCTCCAATCCATCCCCCAAACTCCTGCAGACGAT
ACCCAAGACCCGCTCAATGACTCTCTCCAGCGGAATGTGACGCCCACGGC
AGGCCAGGCCGTCTTTGAGCGAGCGCCTTCTGTCCAAATCACTCAATCCC
GTCGGTTGGCCATCACCGTGCTGCTGCTCCTGGCCAATCTTGTGCAGGTA
ACGTATCCATCACATTCCTAGATTTTCCGCTGCTGAGGGATGCCAGATGA
CTGTGAGTTTTGCTGGGATCGCGGGTGGAACTCTGCTAGGGGAGTCTCTA
GGTGCTCAGGAGAGCTCTGCCACGTGGGTCGGCGCAAGTTATGCGTTAGT
AGCAGCTGGAGCAACAAGAAGATAATCATGGTTACACTAACTCTGTTTAG
AATGACACAAGGGACCTTCGTTCTTATGAGCGGGCGATTGGGAGACGTCT
ACGGCCATCGAGAGCTTCTCCTGGCGGGCGGAGCATGGCTTAGTCTTTGT
ACCTTGATCAGCGCTTTCTGCAGCAACTTCTATGCGTTTGTCGCCATGCG
GGCGCTCGCAGGCCTAGGAGGTGCCTTCATCATGCCTAATGCTGTGGCTC
TGATTGCAAGCACCAATCCTCCAGGACGCGTGCGCAACCTCAGTTTGGGT
TTCTTCGCTGCGTCGGCGCCAACCGGTGGCTATTTCGGGGCATTGTCCCT
GGGTGCATTCATGGAAGGAACAGAATGGAAATGGTTCTTCGTCTTCATGT
AGGTGGTAGTACCCTGCTGAATGGGATAGTACTAACGAAGTTGAACCATA
GAGCTGCCATTGGCATTGCCACCTTCGTCCCCTTGTGGGCATTGAGTTCA
CGAGAGACTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGATCAGC
ACTGGGAACAAGTTCCCTGATCTTGTTCAACTTTGTCTGGAAGTAAGCTA
ATTTCCGCCCGGAAGAAGACAAATCCATACTCACCACACTCTACTGCAGT
CAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAAT
CACATCCGTCATCCTTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCA
CAGACTACCCTATCATGCCGCTCGAGATCTTCAAGGCCCCATCAATCCTC
ACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGAT
CTGGTATCAGGTCCTCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTGC
ACTTCGCCGTCGGCTGGACCCCCTTCGTAATCTGTGCCACGGGCGCAGCC
TCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCGC
CATCGGAACCATAACCATCCTGATCTCCAACGCACTAATGGCCACCGTCC
CAGTGCACCAAACCTACTGGGCGCAGGTCTTCCCCTCCATCGTGCTTTTC
TCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCAA
CTCCGTCCGTCGGCACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCAC
TGAACCTCTACGGCGTTAGTCTAGGGTTGGGCTTTGCCGCTACAATCGAG
GACCAGATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTTT
GTACTTCGGGGTAGGGATCAGCGCGGTGGCATTACTGCTGGACGTGTGTT
TTGTGCGGATGGTGAAGGATGATCGCGAAGGATGGAACGAGGAAGATCGC
GCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGGC
GGCAACTGGTGCACAGTGGCCTGCTGCGGTAGAGCGGGCGTGAGATTCGA
GCAATACAACCAAGCTGTCGTAGGTCGAAGGAGTATAGAAATCCCCCTCG
CCTTTAATGAGTTGTGCTGGTAGGCAGAATGAGAGGTAGAACGGACTGAT
TGATTGATCATTCGACGATTCAAACTACTAGAAATCACTCGTCGGACTGT
TCGTTGCTTCCTGTTTCCCCGGGAGAGAATAGTAAGGTGTTCATTGACAT
AGGGATACAGCCAGCAACAGACAACATAAATCAATTAATAGAAAGAACAA
ACTGAATATTATTGAGGATTCGATACAGCTATTGTAGAAAGAAATAGAGG
GACAAAAAAACCAAAAAGAAGATTCAAGGCCCGAGCCGCGGATCGAACGC
GGGACCTCTCGCAGATATGCTTGGGTTTGTATCCCTAAGCGAGAATCATA
CCACTAGACCAC back to topCoding sequence (CDS) from alignment at ch7:5312825..5315286- >KJC3_011129-T1 ID=KJC3_011129-T1|Name=KJC3_011129-T1|organism=Aspergillus niger KJC3|type=CDS|length=5724bp|location=Sequence derived from alignment at ch7:5312825..5315286- (Aspergillus niger KJC3)
TCAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAA
TCACATCCGTCATCCTTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGC
ACAGACTACCCTATCATGCCGCTCGAGATCTTCAAGGCCCCATCAATCCT
CACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGA
TCTGGTATCAGGTCCTCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTG
CACTTCGCCGTCGGCTGGACCCCCTTCGTAATCTGTGCCACGGGCGCAGC
CTCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCG
CCATCGGAACCATAACCATCCTGATCTCCAACGCACTAATGGCCACCGTC
CCAGTGCACCAAACCTACTGGGCGCAGGTCTTCCCCTCCATCGTGCTTTT
CTCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCA
ACTCCGTCCGTCGGCACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCA
CTGAACCTCTACGGCGTTAGTCTAGGGTTGGGCTTTGCCGCTACAATCGA
GGACCAGATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTT
TGTACTTCGGGGTAGGGATCAGCGCGGTGGCATTACTGCTGGACGTGTGT
TTTGTGCGGATGGTGAAGGATGATCGCGAAGGATGGAACGAGGAAGATCG
CGCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGG
CGGCAACTGGTGCACAGTGGCCTGCTGCGGTAGAGCGGGCGTGAAGCTGC
CATTGGCATTGCCACCTTCGTCCCCTTGTGGGCATTGAGTTCACGAGAGA
CTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGATCAGCACTGGGA
ACAAGTTCCCTGATCTTGTTCAACTTTGTCTGGAAAATGACACAAGGGAC
CTTCGTTCTTATGAGCGGGCGATTGGGAGACGTCTACGGCCATCGAGAGC
TTCTCCTGGCGGGCGGAGCATGGCTTAGTCTTTGTACCTTGATCAGCGCT
TTCTGCAGCAACTTCTATGCGTTTGTCGCCATGCGGGCGCTCGCAGGCCT
AGGAGGTGCCTTCATCATGCCTAATGCTGTGGCTCTGATTGCAAGCACCA
ATCCTCCAGGACGCGTGCGCAACCTCAGTTTGGGTTTCTTCGCTGCGTCG
GCGCCAACCGGTGGCTATTTCGGGGCATTGTCCCTGGGTGCATTCATGGA
AGGAACAGAATGGAAATGGTTCTTCGTCTTCATATGACTGTGAGTTTTGC
TGGGATCGCGGGTGGAACTCTGCTAGGGGAGTCTCTAGGTGCTCAGGAGA
GCTCTGCCACGTGGGTCGGCGCAAGTTATGCTCAAGCACCCAGCGTAGGA
TGGTCCACTCCCTACGAAATCGCCCTCCTAATCACATCCGTCATCCTTTT
TGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCACAGACTACCCTATCATGC
CGCTCGAGATCTTCAAGGCCCCATCAATCCTCACACTACTCCTCGTCGTC
CTCCTCAACTACATGGCCGTCGGCACTTTGATCTGGTATCAGGTCCTCTG
GCTCCAAGACGTCTGGCACTGGTCCCCCCTGCACTTCGCCGTCGGCTGGA
CCCCCTTCGTAATCTGTGCCACGGGCGCAGCCTCCCTTGCGGCATGGCTC
GTCCCTCGATTCGCAGCGCAATGGATCCTCGCCATCGGAACCATAACCAT
CCTGATCTCCAACGCACTAATGGCCACCGTCCCAGTGCACCAAACCTACT
GGGCGCAGGTCTTCCCCTCCATCGTGCTTTTCTCATTCTGTCCGGACTTC
GTCTACACCGCCGCGCAAATCATCGCCAGCAACTCCGTCCGTCGGCACCA
GCAAGGCATTGCAGGTTCACTGATCGGCGCACTGAACCTCTACGGCGTTA
GTCTAGGGTTGGGCTTTGCCGCTACAATCGAGGACCAGATCGCGAAACAC
TCCGGTCGGATAATGGGGTACCGGGCCGCTTTGTACTTCGGGGTAGGGAT
CAGCGCGGTGGCATTACTGCTGGACGTGTGTTTTGTGCGGATGGTGAAGG
ATGATCGCGAAGGATGGAACGAGGAAGATCGCGCTGCTGATGGAACTGAT
GCTGATGCGCTTGAAATGACGGGACAGGCGGCGGCAACTGGTGCACAGTG
GCCTGCTGCGGTAGAGCGGGCGTGAAGCTGCCATTGGCATTGCCACCTTC
GTCCCCTTGTGGGCATTGAGTTCACGAGAGACTCTCCTCGACAGACACGG
AAAGATCGACTGGATAGGATCAGCACTGGGAACAAGTTCCCTGATCTTGT
TCAACTTTGTCTGGAAAATGACACAAGGGACCTTCGTTCTTATGAGCGGG
CGATTGGGAGACGTCTACGGCCATCGAGAGCTTCTCCTGGCGGGCGGAGC
ATGGCTTAGTCTTTGTACCTTGATCAGCGCTTTCTGCAGCAACTTCTATG
CGTTTGTCGCCATGCGGGCGCTCGCAGGCCTAGGAGGTGCCTTCATCATG
CCTAATGCTGTGGCTCTGATTGCAAGCACCAATCCTCCAGGACGCGTGCG
CAACCTCAGTTTGGGTTTCTTCGCTGCGTCGGCGCCAACCGGTGGCTATT
TCGGGGCATTGTCCCTGGGTGCATTCATGGAAGGAACAGAATGGAAATGG
TTCTTCGTCTTCATATGACTGTGAGTTTTGCTGGGATCGCGGGTGGAACT
CTGCTAGGGGAGTCTCTAGGTGCTCAGGAGAGCTCTGCCACGTGGGTCGG
CGCAAGTTATGCTCAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAA
TCGCCCTCCTAATCACATCCGTCATCCTTTTTGGGGCCTTCCTTCTCTGG
GAGAAAAGCGGCACAGACTACCCTATCATGCCGCTCGAGATCTTCAAGGC
CCCATCAATCCTCACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCG
TCGGCACTTTGATCTGGTATCAGGTCCTCTGGCTCCAAGACGTCTGGCAC
TGGTCCCCCCTGCACTTCGCCGTCGGCTGGACCCCCTTCGTAATCTGTGC
CACGGGCGCAGCCTCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGC
AATGGATCCTCGCCATCGGAACCATAACCATCCTGATCTCCAACGCACTA
ATGGCCACCGTCCCAGTGCACCAAACCTACTGGGCGCAGGTCTTCCCCTC
CATCGTGCTTTTCTCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAA
TCATCGCCAGCAACTCCGTCCGTCGGCACCAGCAAGGCATTGCAGGTTCA
CTGATCGGCGCACTGAACCTCTACGGCGTTAGTCTAGGGTTGGGCTTTGC
CGCTACAATCGAGGACCAGATCGCGAAACACTCCGGTCGGATAATGGGGT
ACCGGGCCGCTTTGTACTTCGGGGTAGGGATCAGCGCGGTGGCATTACTG
CTGGACGTGTGTTTTGTGCGGATGGTGAAGGATGATCGCGAAGGATGGAA
CGAGGAAGATCGCGCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGA
CGGGACAGGCGGCGGCAACTGGTGCACAGTGGCCTGCTGCGGTAGAGCGG
GCGTGAAGCTGCCATTGGCATTGCCACCTTCGTCCCCTTGTGGGCATTGA
GTTCACGAGAGACTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGA
TCAGCACTGGGAACAAGTTCCCTGATCTTGTTCAACTTTGTCTGGAAAAT
GACACAAGGGACCTTCGTTCTTATGAGCGGGCGATTGGGAGACGTCTACG
GCCATCGAGAGCTTCTCCTGGCGGGCGGAGCATGGCTTAGTCTTTGTACC
TTGATCAGCGCTTTCTGCAGCAACTTCTATGCGTTTGTCGCCATGCGGGC
GCTCGCAGGCCTAGGAGGTGCCTTCATCATGCCTAATGCTGTGGCTCTGA
TTGCAAGCACCAATCCTCCAGGACGCGTGCGCAACCTCAGTTTGGGTTTC
TTCGCTGCGTCGGCGCCAACCGGTGGCTATTTCGGGGCATTGTCCCTGGG
TGCATTCATGGAAGGAACAGAATGGAAATGGTTCTTCGTCTTCATATGAC
TGTGAGTTTTGCTGGGATCGCGGGTGGAACTCTGCTAGGGGAGTCTCTAG
GTGCTCAGGAGAGCTCTGCCACGTGGGTCGGCGCAAGTTATGCTCAAGCA
CCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAATCACATC
CGTCATCCTTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCACAGACT
ACCCTATCATGCCGCTCGAGATCTTCAAGGCCCCATCAATCCTCACACTA
CTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGATCTGGTA
TCAGGTCCTCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTGCACTTCG
CCGTCGGCTGGACCCCCTTCGTAATCTGTGCCACGGGCGCAGCCTCCCTT
GCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCGCCATCGG
AACCATAACCATCCTGATCTCCAACGCACTAATGGCCACCGTCCCAGTGC
ACCAAACCTACTGGGCGCAGGTCTTCCCCTCCATCGTGCTTTTCTCATTC
TGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCAACTCCGT
CCGTCGGCACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCACTGAACC
TCTACGGCGTTAGTCTAGGGTTGGGCTTTGCCGCTACAATCGAGGACCAG
ATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTTTGTACTT
CGGGGTAGGGATCAGCGCGGTGGCATTACTGCTGGACGTGTGTTTTGTGC
GGATGGTGAAGGATGATCGCGAAGGATGGAACGAGGAAGATCGCGCTGCT
GATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGGCGGCAAC
TGGTGCACAGTGGCCTGCTGCGGTAGAGCGGGCGTGAAGCTGCCATTGGC
ATTGCCACCTTCGTCCCCTTGTGGGCATTGAGTTCACGAGAGACTCTCCT
CGACAGACACGGAAAGATCGACTGGATAGGATCAGCACTGGGAACAAGTT
CCCTGATCTTGTTCAACTTTGTCTGGAAAATGACACAAGGGACCTTCGTT
CTTATGAGCGGGCGATTGGGAGACGTCTACGGCCATCGAGAGCTTCTCCT
GGCGGGCGGAGCATGGCTTAGTCTTTGTACCTTGATCAGCGCTTTCTGCA
GCAACTTCTATGCGTTTGTCGCCATGCGGGCGCTCGCAGGCCTAGGAGGT
GCCTTCATCATGCCTAATGCTGTGGCTCTGATTGCAAGCACCAATCCTCC
AGGACGCGTGCGCAACCTCAGTTTGGGTTTCTTCGCTGCGTCGGCGCCAA
CCGGTGGCTATTTCGGGGCATTGTCCCTGGGTGCATTCATGGAAGGAACA
GAATGGAAATGGTTCTTCGTCTTCATATGACTGTGAGTTTTGCTGGGATC
GCGGGTGGAACTCTGCTAGGGGAGTCTCTAGGTGCTCAGGAGAGCTCTGC
CACGTGGGTCGGCGCAAGTTATGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011129-T1.utr3p1 | KJC3_011129-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011129-T1.utr5p1 | KJC3_011129-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5312825..5315286 - |
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