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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5344450..5346186+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011142-T2 ID=KJC3_011142-T2|Name=KJC3_011142-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1737bp|location=Sequence derived from alignment at ch7:5344450..5346186+ (Aspergillus niger KJC3)
ATGCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCAT
CACCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAGGTT
GGTAGTTTTCTTCACGGTCTCCCGGGATAGAGGATGATGATGGCTGACAA
GACGGGAATGATAGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCT
TCGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACC
GGTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCAT
CGGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCA
TGATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTG
CTGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCAC
CGCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCAC
TCCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTAC
TGGTGAGTTCGACCCATGTTACCACACATTTACCGATGTACTAACGGAGC
AATTCTCCATAGGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACG
AATGGCGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATC
TTGCAGGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGA
CCGTCATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTA
TCGATGATCCCAACGTCACCAAAACCATCATGGACGTCCAATTCGTGCTG
GAGGAGGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTG
GGGCGAAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGC
TGGGCCAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTG
ATGTTCCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGG
TGGGGCCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCT
TGATGGACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGC
TTATGCCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGA
GGACTGTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCT
ACGGCGTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAAC
ACAACGCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTG
GATGGCCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGGTGGGT
TTTGCTGCGCTTGATGAATCAGGAAGAATGACATACTGACATATGATGTA
TAGACAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCC
GTATTTATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGA
GCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAG
TCTTCACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTG
GAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCA
TATCGGATGAACTGCGTAGCAGTAGCTGTTTTGCTTT back to topCoding sequence (CDS) from alignment at ch7:5344450..5346186+ >KJC3_011142-T2 ID=KJC3_011142-T2|Name=KJC3_011142-T2|organism=Aspergillus niger KJC3|type=CDS|length=6096bp|location=Sequence derived from alignment at ch7:5344450..5346186+ (Aspergillus niger KJC3)
ATGCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCAT
CACCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAGGTG
TCATGTCCGGCATTGTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAAT
AACCCCGACGCGGCGATGCAGGGCAACATTACCGGTCTCTACGATATCGG
TTGCGTGATCGGATCCATCATTTGCTACTTCATCGGCGAGCGAATGGGTC
GTCGAACCATGCTGATGATGGGCGGGTTCATCATGATCATCGGAACCGTC
ATCCTCGCTTCCTCCTACACAATAGCACAGCTGCTGGTCGGCCGAATCGT
TACCGGGCTGGGTAACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGA
GTGAATGTTCTCCAGCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGA
ACCGTCACTATCCTGGGCGTGGTGATCGCCTACTGGATGGACTACGGCAC
CAGCTTTACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGG
CTGTCTTCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACC
CCCCGTTGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGT
GGCTGCCATCGAAGACACCACTATCGATGATCCCAACGTCACCAAAACCA
TCATGGACGTCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTC
CGCGTCAAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCT
ATTCATCACCATCACCATTGAGCTGGGCCAACAATTCACGGGATCAAATA
TGATAAATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAATATGAGC
CGCAACTTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGT
GGGTTCGGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGCGTACCT
TACTAATGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCG
ATTCTGCTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTT
CATCTTCATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCAT
GGTTCTACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGGATGCAG
GCCATCGCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGAT
CACTCCAATTGCATTTGACAACATCGGCTGGCGCACCTTTGTCATCTTCG
CGGTATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTACCCGGAG
ACGAAGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGG
AATCACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTCACACCCG
GCCAGCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTA
CAGCAAGTGGAGCATATCGGATGAATGCGTCTTTGGAAACATGACTTTCG
GGGCAGGGCCCTGATCATCGCCATCACCATGGCCTCCTGTCAGGCCTTCC
TCTTGCTGGGGTTTGACCAAGGTGTCATGTCCGGCATTGTGGGTGCGGAT
AATCGCTTCGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAA
CATTACCGGTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCT
ACTTCATCGGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGG
TTCATCATGATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGC
ACAGCTGCTGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACT
CCTCCACCGCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGT
GGTGCACTCCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGAT
CGCCTACTGGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAAT
GGCGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTG
CAGGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCG
TCATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCG
ATGATCCCAACGTCACCAAAACCATCATGGACGTCCAATTCGTGCTGGAG
GAGGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGG
CGAAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGG
GCCAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATG
TTCCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGG
GGCCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGA
TGGACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTA
TGCCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGA
CTGTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACG
GCGTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACA
ACGCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGAT
GGCCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGACAACATCG
GCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCCGTATTTATCCCG
ATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGAGCTCGAGGACAT
CCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAGTCTTCACCTCGA
AGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTGGAAGCCCGCGTG
GACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCATATCGGATGAAT
GCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCATCA
CCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAGGTGTC
ATGTCCGGCATTGTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAATAA
CCCCGACGCGGCGATGCAGGGCAACATTACCGGTCTCTACGATATCGGTT
GCGTGATCGGATCCATCATTTGCTACTTCATCGGCGAGCGAATGGGTCGT
CGAACCATGCTGATGATGGGCGGGTTCATCATGATCATCGGAACCGTCAT
CCTCGCTTCCTCCTACACAATAGCACAGCTGCTGGTCGGCCGAATCGTTA
CCGGGCTGGGTAACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGAGT
GAATGTTCTCCAGCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGAAC
CGTCACTATCCTGGGCGTGGTGATCGCCTACTGGATGGACTACGGCACCA
GCTTTACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGGCT
GTCTTCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACCCC
CCGTTGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGTGG
CTGCCATCGAAGACACCACTATCGATGATCCCAACGTCACCAAAACCATC
ATGGACGTCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTCCG
CGTCAAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCTAT
TCATCACCATCACCATTGAGCTGGGCCAACAATTCACGGGATCAAATATG
ATAAATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAATATGAGCCG
CAACTTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGTGG
GTTCGGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGCGTACCTTA
CTAATGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCGAT
TCTGCTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTTCA
TCTTCATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCATGG
TTCTACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGGATGCAGGC
CATCGCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGATCA
CTCCAATTGCATTTGACAACATCGGCTGGCGCACCTTTGTCATCTTCGCG
GTATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTACCCGGAGAC
GAAGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAA
TCACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTCACACCCGGC
CAGCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACA
GCAAGTGGAGCATATCGGATGAATGCGTCTTTGGAAACATGACTTTCGGG
GCAGGGCCCTGATCATCGCCATCACCATGGCCTCCTGTCAGGCCTTCCTC
TTGCTGGGGTTTGACCAAGGTGTCATGTCCGGCATTGTGGGTGCGGATAA
TCGCTTCGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACA
TTACCGGTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTAC
TTCATCGGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTT
CATCATGATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCAC
AGCTGCTGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCC
TCCACCGCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGG
TGCACTCCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCG
CCTACTGGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAATGG
CGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTGCA
GGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCGTC
ATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCGAT
GATCCCAACGTCACCAAAACCATCATGGACGTCCAATTCGTGCTGGAGGA
GGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGCG
AAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGGGC
CAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATGTT
CCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGGGG
CCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGATG
GACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTATG
CCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGACT
GTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACGGC
GTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACAAC
GCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGATGG
CCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGACAACATCGGC
TGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCCGTATTTATCCCGAT
GGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGAGCTCGAGGACATCC
CCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAGTCTTCACCTCGAAG
GGTGGACGCACCGTCACACCCGGCCAGCACGCGCTGGAAGCCCGCGTGGA
CCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCATATCGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011142-T2.utr3p1 | KJC3_011142-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5344450..5346186 + |
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