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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5356352..5357174- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011148-T1 ID=KJC3_011148-T1|Name=KJC3_011148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=823bp|location=Sequence derived from alignment at ch7:5356352..5357174- (Aspergillus niger KJC3)
TGTACCATTCCTCTTTGCATTCGCGTGTGCATTTAATACTATTATACCCG
TCATGTCCCTGACAAACATAGACACAACCAACCCAGCCACACCCCCCACC
GACTCCAACACAACAACAACCGTAACCACACTCCCAACCGACGACCTCAC
CTCCCTCCCAACCATCCCCTACACCCCACCCACAATCTCCCCCCGCCCCC
TCGCCATCCTCGGCGCCGGCAACCTGGGCCGACGCATCGCCTGCATCTTC
TCCGCGGCAGGGCACACCGTGCACCTCCACGACCCAAACCAAGGAGCCCT
ACAGTCCGCACAACACTACATAACCTCAAACCTCGCACACTACACGACGT
TCCCACTGATATCCCGACCGGTGGGACAAATCCACGCGTTCTCGTCGGCG
GACATAACCCCGGCGGTCAGGGACGCATGGCTAGTGATCGAATGCGTACC
GGAACACCTCCCGCTCAAGATCGACATCATGGGCGAGTTGGACGCCAAGA
CCCCGCGGGACTGCATTCTGGTGTCGAATTCGGCGGCGTTTCGGACGAGT
TTCATGGTGGAAAAGGTGTGTTTGGAGAGACGGCGGCTGATGTGTAATAT
GTGTTTTGGGGCGTCGCCGTGGATCAGGGCCGTGGAGTTGGGGGTGAATG
AGGGGGTTACGGAGGGGGAGGTGGTTAGGGTGTTGACGTGGGTGTTGGAT
GATTGTGGGATGATGCCGGTGCGGACGAGTCGGGTTGCTGGTGGTGGGGG
TGGTGGAGGGAGTGGTGGAAGGGAGGGGGAGGGGGGGTTGGTGAGGAGTC
AGTGTTTGAATACGGTTAATTGA back to topCoding sequence (CDS) from alignment at ch7:5356352..5357174- >KJC3_011148-T1 ID=KJC3_011148-T1|Name=KJC3_011148-T1|organism=Aspergillus niger KJC3|type=CDS|length=771bp|location=Sequence derived from alignment at ch7:5356352..5357174- (Aspergillus niger KJC3)
ATGTCCCTGACAAACATAGACACAACCAACCCAGCCACACCCCCCACCGA
CTCCAACACAACAACAACCGTAACCACACTCCCAACCGACGACCTCACCT
CCCTCCCAACCATCCCCTACACCCCACCCACAATCTCCCCCCGCCCCCTC
GCCATCCTCGGCGCCGGCAACCTGGGCCGACGCATCGCCTGCATCTTCTC
CGCGGCAGGGCACACCGTGCACCTCCACGACCCAAACCAAGGAGCCCTAC
AGTCCGCACAACACTACATAACCTCAAACCTCGCACACTACACGACGTTC
CCACTGATATCCCGACCGGTGGGACAAATCCACGCGTTCTCGTCGGCGGA
CATAACCCCGGCGGTCAGGGACGCATGGCTAGTGATCGAATGCGTACCGG
AACACCTCCCGCTCAAGATCGACATCATGGGCGAGTTGGACGCCAAGACC
CCGCGGGACTGCATTCTGGTGTCGAATTCGGCGGCGTTTCGGACGAGTTT
CATGGTGGAAAAGGTGTGTTTGGAGAGACGGCGGCTGATGTGTAATATGT
GTTTTGGGGCGTCGCCGTGGATCAGGGCCGTGGAGTTGGGGGTGAATGAG
GGGGTTACGGAGGGGGAGGTGGTTAGGGTGTTGACGTGGGTGTTGGATGA
TTGTGGGATGATGCCGGTGCGGACGAGTCGGGTTGCTGGTGGTGGGGGTG
GTGGAGGGAGTGGTGGAAGGGAGGGGGAGGGGGGGTTGGTGAGGAGTCAG
TGTTTGAATACGGTTAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006631 | fatty acid metabolic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011148-T1.utr5p1 | KJC3_011148-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR029752 |
| DBxref | InterPro:IPR006176 |
| DBxref | PFAM:PF02737 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5356352..5357174 - |
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