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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:38207..39716+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011210-T1 ID=KJC3_011210-T1|Name=KJC3_011210-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1510bp|location=Sequence derived from alignment at ch8:38207..39716+ (Aspergillus niger KJC3)
ATGTATGGGTCGGAGCAACAGCGTCGTAGGATACAGAAGTTGACGCTCTC
GTACTCAGATCAGTTTCTGGATCTATGCTTACCCCTTGACTGTATGAATG
ACCTCCAACTCTTTTTGACCTACGAGAATTTCATATCTCATTCGCAGGTT
GATGGGGACCAAAGTAGGTGATTCAGATTGCGAAGAAACCCTAGTGGCAC
ATACAAGACTAATCTGATATTTTCCCCCAGGCTACCTGTCCTGGAGAAAA
TTGGGGGATGTCGCAGCTGCTCTTTTTGCCCTTGGGTACCACCAACAACA
AACAGAATCTTTTCGTGCAGCCCCTACCTTCCTACGGGATCTGCGGCAGA
CCGCCTTCTGTCGAGCATACTCCGCCGACAAGAACGTTTCCATTTTTCTT
GGTCGGCCACCTCGAATCCTACGTAAATTCTGTCACTTTTATCTACCTGG
TGATCATAATGATGATTCACACGAGGCATCGCGCAGCCCAGCAATTTGGC
TTCATACTGAAAAGCTGGACTTTGCTACTGATTCAAGATGGGCTGGTCTT
TGTGCCATTTTGAAGGATGATATATTGGACTTGTTCACCGAGGACAATCA
TGATGAAAGGGCCCGAAGAGCATGGTAAGTTGAGCGATCTCTGTATATCA
CTCTTAAGTGTGCTTCTAACTTCAATAAGGCTCATAGAGGCTGATATCCA
GGCGCAATGGCTTGCGGTTCCTCGAAGTTGTCGGCTGGAGGGCGGCCTTA
AAGCCTGTGACCGGCGACCAGTAGAACGAGACTTCATGGTTAACATGAAG
TTGAACTACTTACATGTCCAATTCCTTCTGCGGCTTGCATTAGTCCGCCC
TATGTCCACGGAGCCCGACTCGGACTTGCTCAATGTCTCCCTGAAAATGT
TGGGCCTTGTTGTAGAAACCATTTTACTCAAAGATCAGATAGTGAACTCT
GGTACATCGCTCGTATGGAAGGTGGGCTCCATGTGCATCCCAATTTGCAA
CATCATATCTAACTAGAACGATATCAAAGGTTGCATACTATGGCTTGTCA
GCTGCGGGAATGATTTGTCTCACTCTTGTCAACCGCTCATTTGCAATTGG
AAGCTTCGCAACAAGTTACTCTAAAATATTCCAAGAGTTAAGCATTCTTG
CGGCAGAAATCGAACGCGGCACATTAGTATATGTGGACTCACCCAACTAT
GCCTTGCTAGCTCGCGCAACCCAAACCATAAAGGCTATTCTTGATCGTAT
GATGACACCTTCGGACAATACAGTGGTGGCTCCAGATAACCAACATGAAG
GGGCGGCTGCCTCTGAGCAAAGGGACGCCCTATATGACGAATCCTGGGGG
TTGTGGGACAATACCAACCTCCAAGAATTTGAACTCAGTTTCTGGCACAA
TCTTGCCGGTCACCCTTCGCTAAACCAATGAGATGCGCTTCAGGATTAAT
AGTATGTTGATTATGATTTGATGTTTATCTGTTCTTCGGAGTTCAAAGCT
TACAGGTGGC back to topCoding sequence (CDS) from alignment at ch8:38207..39716+ >KJC3_011210-T1 ID=KJC3_011210-T1|Name=KJC3_011210-T1|organism=Aspergillus niger KJC3|type=CDS|length=5004bp|location=Sequence derived from alignment at ch8:38207..39716+ (Aspergillus niger KJC3)
ATGTATGGGTCGGAGCAACAGCGTCGTAGGATACAGAAGTTGACGCTCTC
GTACTCAGATCAGTTTCTGGATCTATGCTTACCCCTTGACTGTATGAATG
ACCTCCAACTCTTTTTGACCTACGAGAATTTCATATCTCATTCGCAGGTT
GATGGGGACCAAAGCTACCTGTCCTGGAGAAAATTGGGGGATGTCGCAGC
TGCTCTTTTTGCCCTTGGGTACCACCAACAACAAACAGAATCTTTTCGTG
CAGCCCCTACCTTCCTACGGGATCTGCGGCAGACCGCCTTCTGTCGAGCA
TACTCCGCCGACAAGAACGTTTCCATTTTTCTTGGTCGGCCACCTCGAAT
CCTACGTAAATTCTGTCACTTTTATCTACCTGGTGATCATAATGATGATT
CACACGAGGCATCGCGCAGCCCAGCAATTTGGCTTCATACTGAAAAGCTG
GACTTTGCTACTGATTCAAGATGGGCTGGTCTTTGTGCCATTTTGAAGGA
TGATATATTGGACTTGTTCACCGAGGACAATCATGATGAAAGGGCCCGAA
GAGCATGGCTCATAGAGGCTGATATCCAGGCGCAATGGCTTGCGGTTCCT
CGAAGTTGTCGGCTGGAGGGCGGCCTTAAAGCCTGTGACCGGCGACCAGT
AGAACGAGACTTCATGGTTAACATGAAGTTGAACTACTTACATGTCCAAT
TCCTTCTGCGGCTTGCATTAGTCCGCCCTATGTCCACGGAGCCCGACTCG
GACTTGCTCAATGTCTCCCTGAAAATGTTGGGCCTTGTTGTAGAAACCAT
TTTACTCAAAGATCAGATAGTGAACTCTGGTACATCGCTCGTATGGAAGG
TTGCATACTATGGCTTGTCAGCTGCGGGAATGATTTGTCTCACTCTTGTC
AACCGCTCATTTGCAATTGGAAGCTTCGCAACAAGTTACTCTAAAATATT
CCAAGAGTTAAGCATTCTTGCGGCAGAAATCGAACGCGGCACATTAGTAT
ATGTGGACTCACCCAACTATGCCTTGCTAGCTCGCGCAACCCAAACCATA
AAGGCTATTCTTGATCGTATGATGACACCTTCGGACAATACAGTGGTGGC
TCCAGATAACCAACATGAAGGGGCGGCTGCCTCTGAGCAAAGGGACGCCC
TATATGACGAATCCTGGGGGTTGTGGGACAATACCAACCTCCAAGAATTT
GAACTCAGTTTCTGGCACAATCTTGCCGGTCACCCTTCGCTAAACCAATG
AATGTATGGGTCGGAGCAACAGCGTCGTAGGATACAGAAGTTGACGCTCT
CGTACTCAGATCAGTTTCTGGATCTATGCTTACCCCTTGACTGTATGAAT
GACCTCCAACTCTTTTTGACCTACGAGAATTTCATATCTCATTCGCAGGT
TGATGGGGACCAAAGCTACCTGTCCTGGAGAAAATTGGGGGATGTCGCAG
CTGCTCTTTTTGCCCTTGGGTACCACCAACAACAAACAGAATCTTTTCGT
GCAGCCCCTACCTTCCTACGGGATCTGCGGCAGACCGCCTTCTGTCGAGC
ATACTCCGCCGACAAGAACGTTTCCATTTTTCTTGGTCGGCCACCTCGAA
TCCTACGTAAATTCTGTCACTTTTATCTACCTGGTGATCATAATGATGAT
TCACACGAGGCATCGCGCAGCCCAGCAATTTGGCTTCATACTGAAAAGCT
GGACTTTGCTACTGATTCAAGATGGGCTGGTCTTTGTGCCATTTTGAAGG
ATGATATATTGGACTTGTTCACCGAGGACAATCATGATGAAAGGGCCCGA
AGAGCATGGCTCATAGAGGCTGATATCCAGGCGCAATGGCTTGCGGTTCC
TCGAAGTTGTCGGCTGGAGGGCGGCCTTAAAGCCTGTGACCGGCGACCAG
TAGAACGAGACTTCATGGTTAACATGAAGTTGAACTACTTACATGTCCAA
TTCCTTCTGCGGCTTGCATTAGTCCGCCCTATGTCCACGGAGCCCGACTC
GGACTTGCTCAATGTCTCCCTGAAAATGTTGGGCCTTGTTGTAGAAACCA
TTTTACTCAAAGATCAGATAGTGAACTCTGGTACATCGCTCGTATGGAAG
GTTGCATACTATGGCTTGTCAGCTGCGGGAATGATTTGTCTCACTCTTGT
CAACCGCTCATTTGCAATTGGAAGCTTCGCAACAAGTTACTCTAAAATAT
TCCAAGAGTTAAGCATTCTTGCGGCAGAAATCGAACGCGGCACATTAGTA
TATGTGGACTCACCCAACTATGCCTTGCTAGCTCGCGCAACCCAAACCAT
AAAGGCTATTCTTGATCGTATGATGACACCTTCGGACAATACAGTGGTGG
CTCCAGATAACCAACATGAAGGGGCGGCTGCCTCTGAGCAAAGGGACGCC
CTATATGACGAATCCTGGGGGTTGTGGGACAATACCAACCTCCAAGAATT
TGAACTCAGTTTCTGGCACAATCTTGCCGGTCACCCTTCGCTAAACCAAT
GAATGTATGGGTCGGAGCAACAGCGTCGTAGGATACAGAAGTTGACGCTC
TCGTACTCAGATCAGTTTCTGGATCTATGCTTACCCCTTGACTGTATGAA
TGACCTCCAACTCTTTTTGACCTACGAGAATTTCATATCTCATTCGCAGG
TTGATGGGGACCAAAGCTACCTGTCCTGGAGAAAATTGGGGGATGTCGCA
GCTGCTCTTTTTGCCCTTGGGTACCACCAACAACAAACAGAATCTTTTCG
TGCAGCCCCTACCTTCCTACGGGATCTGCGGCAGACCGCCTTCTGTCGAG
CATACTCCGCCGACAAGAACGTTTCCATTTTTCTTGGTCGGCCACCTCGA
ATCCTACGTAAATTCTGTCACTTTTATCTACCTGGTGATCATAATGATGA
TTCACACGAGGCATCGCGCAGCCCAGCAATTTGGCTTCATACTGAAAAGC
TGGACTTTGCTACTGATTCAAGATGGGCTGGTCTTTGTGCCATTTTGAAG
GATGATATATTGGACTTGTTCACCGAGGACAATCATGATGAAAGGGCCCG
AAGAGCATGGCTCATAGAGGCTGATATCCAGGCGCAATGGCTTGCGGTTC
CTCGAAGTTGTCGGCTGGAGGGCGGCCTTAAAGCCTGTGACCGGCGACCA
GTAGAACGAGACTTCATGGTTAACATGAAGTTGAACTACTTACATGTCCA
ATTCCTTCTGCGGCTTGCATTAGTCCGCCCTATGTCCACGGAGCCCGACT
CGGACTTGCTCAATGTCTCCCTGAAAATGTTGGGCCTTGTTGTAGAAACC
ATTTTACTCAAAGATCAGATAGTGAACTCTGGTACATCGCTCGTATGGAA
GGTTGCATACTATGGCTTGTCAGCTGCGGGAATGATTTGTCTCACTCTTG
TCAACCGCTCATTTGCAATTGGAAGCTTCGCAACAAGTTACTCTAAAATA
TTCCAAGAGTTAAGCATTCTTGCGGCAGAAATCGAACGCGGCACATTAGT
ATATGTGGACTCACCCAACTATGCCTTGCTAGCTCGCGCAACCCAAACCA
TAAAGGCTATTCTTGATCGTATGATGACACCTTCGGACAATACAGTGGTG
GCTCCAGATAACCAACATGAAGGGGCGGCTGCCTCTGAGCAAAGGGACGC
CCTATATGACGAATCCTGGGGGTTGTGGGACAATACCAACCTCCAAGAAT
TTGAACTCAGTTTCTGGCACAATCTTGCCGGTCACCCTTCGCTAAACCAA
TGAATGTATGGGTCGGAGCAACAGCGTCGTAGGATACAGAAGTTGACGCT
CTCGTACTCAGATCAGTTTCTGGATCTATGCTTACCCCTTGACTGTATGA
ATGACCTCCAACTCTTTTTGACCTACGAGAATTTCATATCTCATTCGCAG
GTTGATGGGGACCAAAGCTACCTGTCCTGGAGAAAATTGGGGGATGTCGC
AGCTGCTCTTTTTGCCCTTGGGTACCACCAACAACAAACAGAATCTTTTC
GTGCAGCCCCTACCTTCCTACGGGATCTGCGGCAGACCGCCTTCTGTCGA
GCATACTCCGCCGACAAGAACGTTTCCATTTTTCTTGGTCGGCCACCTCG
AATCCTACGTAAATTCTGTCACTTTTATCTACCTGGTGATCATAATGATG
ATTCACACGAGGCATCGCGCAGCCCAGCAATTTGGCTTCATACTGAAAAG
CTGGACTTTGCTACTGATTCAAGATGGGCTGGTCTTTGTGCCATTTTGAA
GGATGATATATTGGACTTGTTCACCGAGGACAATCATGATGAAAGGGCCC
GAAGAGCATGGCTCATAGAGGCTGATATCCAGGCGCAATGGCTTGCGGTT
CCTCGAAGTTGTCGGCTGGAGGGCGGCCTTAAAGCCTGTGACCGGCGACC
AGTAGAACGAGACTTCATGGTTAACATGAAGTTGAACTACTTACATGTCC
AATTCCTTCTGCGGCTTGCATTAGTCCGCCCTATGTCCACGGAGCCCGAC
TCGGACTTGCTCAATGTCTCCCTGAAAATGTTGGGCCTTGTTGTAGAAAC
CATTTTACTCAAAGATCAGATAGTGAACTCTGGTACATCGCTCGTATGGA
AGGTTGCATACTATGGCTTGTCAGCTGCGGGAATGATTTGTCTCACTCTT
GTCAACCGCTCATTTGCAATTGGAAGCTTCGCAACAAGTTACTCTAAAAT
ATTCCAAGAGTTAAGCATTCTTGCGGCAGAAATCGAACGCGGCACATTAG
TATATGTGGACTCACCCAACTATGCCTTGCTAGCTCGCGCAACCCAAACC
ATAAAGGCTATTCTTGATCGTATGATGACACCTTCGGACAATACAGTGGT
GGCTCCAGATAACCAACATGAAGGGGCGGCTGCCTCTGAGCAAAGGGACG
CCCTATATGACGAATCCTGGGGGTTGTGGGACAATACCAACCTCCAAGAA
TTTGAACTCAGTTTCTGGCACAATCTTGCCGGTCACCCTTCGCTAAACCA
ATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011210-T1.utr3p1 | KJC3_011210-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:38207..39716 + |
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