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KJC3_011212-T1, KJC3_011212-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011212-T1
Unique NameKJC3_011212-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:46115..48137-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011212-T1 ID=KJC3_011212-T1|Name=KJC3_011212-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2023bp|location=Sequence derived from alignment at ch8:46115..48137- (Aspergillus niger KJC3)
CTGGGTAATACGGAACAGCCACCCAGGGCAAATGCACACTGCCTCCCCAC
GAAACTGATTGTTTGAGCAGCCGCCGCCCCACCTCGTCCCGACCGCCTTA
GAACCTTTGCCCACCATATGTGAGCACAGCGCTTACAGCCTGACCAGGTG
ATGCTGCATTGGAGTAATAAGAAGCCATCTAGGCCCCAGGAAAATCCCAG
TCAACAATATTCCTACTTGAACTGCCTCTATCTGGACCTTTGCCCTTGCC
TTGTTTCTCTGTACAAGTTCACCATTTGTCTTGTTGCTTTGCACAGTAAA
GCTATACCACTGCACACAGATAGCCATGGCGGAACCCATCGGACTCGCTT
CTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGGCACGGTTTCGCTT
TATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGCGTGTGCGCGACCT
TCTCGAAGAGCTCGGAGCTTTGAGGGCTGTGTTGGCGCCCCTAATTGAGC
TAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCTAGATCTGCCGTTA
TTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGGAGTTGGTTCGGTG
CGCGTCACGATCGAGCAATAATCGAGCCAGCTTCCGTGACTGGGCGAGAC
TCACGTACATGGGTGATGATATCGATGATTTTCGTAACCTGCTGGCAGGA
TACAAGGCCACAATTAATATTGCTTTGACTGATGCAACTTTGTAAGCATC
CAAACCCAACAACATCAGCTTTTCTTATCAAACTTCTGCTCTTTGGTCAT
GGTTACTGATCGCCGCACAAGGCGCAAATCTGCGGTCGCTGTCGAAAGCA
TTGAGAACTACGAGGCTCTGATTCAGGATGCAAAAGAGGATTTGGGAGCT
CGACTCGAAAATATAGATCGAAAGTTAGAGCAGCTGGCTGAGAAGGACGG
CACCCTATCCGATCCGGATGCAGCCGAACTGCACTCTCTGAAGGAGGAGC
GCCGGAGTACAGAGAAATGTCTTCAGATTTGCGCCCAGTTGTCAAATCAT
ATCGACCAAATCCAGCTGTTATCCGACGACAGGAGTTCAGCTGGAGGATC
TGAGATGGGTGATTCGTCGCCTGAGACTGTTACGAACAAAGGCTTACAGG
AATGTAAAAGAAGCCTAATTGCGACAACCGCCAAGTTGGAAAAGCATATG
CAGGAGATCATGGATCAGCTTCTTGCTAAATCAAAAAATAGGATCTCCTG
TGATGACGATGCCCAAGTGCTATCGCGGCTACGTGATGAATGGGAAGCTG
CTCGGCAGTGTCTGGATATTTGCTCTCATGCGGATAGTCACTTCAAGGAG
TCTGTAAGTAATATTGAAAACCATGGCACTGGGGACGCTCTTCAGTTCAT
GGTCTCCGCAAATGGGAAGGTTCTCCACGGGAAAAACCGAGGCTTGGGCT
GGAGAAGCAGACAAGTAGGAGGCTATATGAGCAACGGAACAATCCAGCAG
CTATCGCGAGATCTCACAGTTCAACATCCTATTTCTCTGAGAGGTGACGA
GCCTCCCTCAAAGACCAGCTTTATGTCAGATGCAAGCGATGTGGCGGAAG
GTCAGACGACGCCGGAGTTCAAGGAACGGTATGGGCGGGGCTTTACCCTA
AGACCAACACTCAAGCCAGAAACAAACACAACATTCCGCAGTATGAGCAG
GGAGTGAAAAAGCCAGAGGCGGCAGAATATAAGCTTTATCAGGAAGGTAT
ATTTCATATGGGCAGTGCACGTCCCTAAGTTTTGGCTTTGTTCTTTATCT
AATCTCGATCTAAAAAAAGATTAAATCTTGACTTGTATATGGTAGTCAGC
ATTAGCTGTTATATTTTAGGTTGCGTTGCAGGTGTCAACTTTCTCCTTGT
GGGGTTCAATAAAGGCATTATACACTGGGGTCACTGTAATTAGGTGATAT
CAAGTTATCAATAGAGAAGTGATCGAGTTGGCCATCCCGCTGAATAACCA
ATCCATGACCAGCAGCTTTTGGC
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Coding sequence (CDS) from alignment at ch8:46115..48137-

>KJC3_011212-T1 ID=KJC3_011212-T1|Name=KJC3_011212-T1|organism=Aspergillus niger KJC3|type=CDS|length=2604bp|location=Sequence derived from alignment at ch8:46115..48137- (Aspergillus niger KJC3)
GCGCAAATCTGCGGTCGCTGTCGAAAGCATTGAGAACTACGAGGCTCTGA
TTCAGGATGCAAAAGAGGATTTGGGAGCTCGACTCGAAAATATAGATCGA
AAGTTAGAGCAGCTGGCTGAGAAGGACGGCACCCTATCCGATCCGGATGC
AGCCGAACTGCACTCTCTGAAGGAGGAGCGCCGGAGTACAGAGAAATGTC
TTCAGATTTGCGCCCAGTTGTCAAATCATATCGACCAAATCCAGCTGTTA
TCCGACGACAGGAGTTCAGCTGGAGGATCTGAGATGGGTGATTCGTCGCC
TGAGACTGTTACGAACAAAGGCTTACAGGAATGTAAAAGAAGCCTAATTG
CGACAACCGCCAAGTTGGAAAAGCATATGCAGGAGATCATGGATCAGCTT
CTTGCTAAATCAAAAAATAGGATCTCCTGTGATGACGATGCCCAAGTGCT
ATCGCGGCTACGTGATGAATGGGAAGCTGCTCGGCAGTGTCTGGATATTT
GCTCTCATGCGGATAGTCACTTCAAGGAGTCTGTAAGTAATATTGAAAAC
CATGGCACTGGGGACGCTCTTCAGTTCATGGTCTCCGCAAATGGGAAGGT
TCTCCACGGGAAAAACCGAGGCTTGGGCTGGAGAAGCAGACAAGTAGGAG
GCTATATGAGCAACGGAACAATCCAGCAGCTATCGCGAGATCTCACAGTT
CAACATCCTATTTCTCTGAGAGGTGACGAGCCTCCCTCAAAGACCAGCTT
TATGTCAGATGCAAGCGATGTGGCGGAAGGTCAGACGACGCCGGAGTTCA
AGGAACGGTATGGGCGGGGCTTTACCCTAAGACCAACACTCAAGCCAGAA
ACAAACACAACATTCCGCAGTATGAGCAGGGAGTGAATGGCGGAACCCAT
CGGACTCGCTTCTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGGCA
CGGTTTCGCTTTATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGCGT
GTGCGCGACCTTCTCGAAGAGCTCGGAGCTTTGAGGGCTGTGTTGGCGCC
CCTAATTGAGCTAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCTAG
ATCTGCCGTTATTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGGAG
TTGGTTCGGTGCGCGTCACGATCGAGCAATAATCGAGCCAGCTTCCGTGA
CTGGGCGAGACTCACGTACATGGGTGATGATATCGATGATTTTCGTAACC
TGCTGGCAGGATACAAGGCCACAATTAATATTGCTTTGACTGATGCAACT
TTGCGCAAATCTGCGGTCGCTGTCGAAAGCATTGAGAACTACGAGGCTCT
GATTCAGGATGCAAAAGAGGATTTGGGAGCTCGACTCGAAAATATAGATC
GAAAGTTAGAGCAGCTGGCTGAGAAGGACGGCACCCTATCCGATCCGGAT
GCAGCCGAACTGCACTCTCTGAAGGAGGAGCGCCGGAGTACAGAGAAATG
TCTTCAGATTTGCGCCCAGTTGTCAAATCATATCGACCAAATCCAGCTGT
TATCCGACGACAGGAGTTCAGCTGGAGGATCTGAGATGGGTGATTCGTCG
CCTGAGACTGTTACGAACAAAGGCTTACAGGAATGTAAAAGAAGCCTAAT
TGCGACAACCGCCAAGTTGGAAAAGCATATGCAGGAGATCATGGATCAGC
TTCTTGCTAAATCAAAAAATAGGATCTCCTGTGATGACGATGCCCAAGTG
CTATCGCGGCTACGTGATGAATGGGAAGCTGCTCGGCAGTGTCTGGATAT
TTGCTCTCATGCGGATAGTCACTTCAAGGAGTCTGTAAGTAATATTGAAA
ACCATGGCACTGGGGACGCTCTTCAGTTCATGGTCTCCGCAAATGGGAAG
GTTCTCCACGGGAAAAACCGAGGCTTGGGCTGGAGAAGCAGACAAGTAGG
AGGCTATATGAGCAACGGAACAATCCAGCAGCTATCGCGAGATCTCACAG
TTCAACATCCTATTTCTCTGAGAGGTGACGAGCCTCCCTCAAAGACCAGC
TTTATGTCAGATGCAAGCGATGTGGCGGAAGGTCAGACGACGCCGGAGTT
CAAGGAACGGTATGGGCGGGGCTTTACCCTAAGACCAACACTCAAGCCAG
AAACAAACACAACATTCCGCAGTATGAGCAGGGAGTGAATGGCGGAACCC
ATCGGACTCGCTTCTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGG
CACGGTTTCGCTTTATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGC
GTGTGCGCGACCTTCTCGAAGAGCTCGGAGCTTTGAGGGCTGTGTTGGCG
CCCCTAATTGAGCTAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCT
AGATCTGCCGTTATTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGG
AGTTGGTTCGGTGCGCGTCACGATCGAGCAATAATCGAGCCAGCTTCCGT
GACTGGGCGAGACTCACGTACATGGGTGATGATATCGATGATTTTCGTAA
CCTGCTGGCAGGATACAAGGCCACAATTAATATTGCTTTGACTGATGCAA
CTTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011212KJC3_011212Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011212-T1KJC3_011212-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011212-T1.cdsKJC3_011212-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011212-T1.utr3p1KJC3_011212-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011212-T1.exon2KJC3_011212-T1.exon2Aspergillus niger KJC3exon
KJC3_011212-T1.exon1KJC3_011212-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011212-T1.utr5p1KJC3_011212-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR031348
DBxrefPFAM:PF17111
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:46115..48137 -
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