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KJC3_011222-T1, KJC3_011222-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011222-T1
Unique NameKJC3_011222-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:77310..78400+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011222-T1 ID=KJC3_011222-T1|Name=KJC3_011222-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1091bp|location=Sequence derived from alignment at ch8:77310..78400+ (Aspergillus niger KJC3)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATTAAGAG
ATCATCCCAGACTCTCGCAATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTCTGTCT
TTTGATGCTTGTAAGTCGCCATAACTTTGACCACTCGGCAAGATCTATCA
AGACCATACTTTGATTGACACAGACTAGCAACATCCAGCAACCGAAGTCT
CATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGGATCCG
CCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGGGCGGT
ATCGCTATGGCCCCGATCGAGGAATCTGGCTCCTTCTGGGTCTTTGATCC
GACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTCGCAAC
ATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAGACACT
ATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGATCTTTG
GGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGCTCCCG
GCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGATCTAC
CGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTGGATGT
GTATGATGTGCGGACGAATGAGTGGACTAGTCTTACTTATGCAGCGGATG
GCGTTTCCGGACCCAGTCCTCGAAGTGTCGGCTGCTTGCTCGTCACAACC
ATCGCTGGAAGGCAGTCTCTGGTAACAATGTTTGGCGAGCATGATCCAAG
TAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTGGGCAT
TTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGCCAAAC
AGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCCGAAGC
ACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGAGTCAA
ATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG
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Coding sequence (CDS) from alignment at ch8:77310..78400+

>KJC3_011222-T1 ID=KJC3_011222-T1|Name=KJC3_011222-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch8:77310..78400+ (Aspergillus niger KJC3)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATTAAGAG
ATCATCCCAGACTCTCGCAATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTCTGTCT
TTTGATGCTTCAACATCCAGCAACCGAAGTCTCATACAGACTCCCCCGTC
TGCCACTCACCCCCAACCCCGCGTAGGATCCGCCTCGACCGCTCTCGCCG
GGAAACTCTATATCTTCTCTGGTCGGGGCGGTATCGCTATGGCCCCGATC
GAGGAATCTGGCTCCTTCTGGGTCTTTGATCCGACCCAGAATACCTGGTC
GCAATTGCCCCCTGCAAACTCAAACTCGCAACATCCTGCGGGCCGAAGCT
ACCACACGCTCACCAATAACGGCACAGACACTATCTATCTGCACGGTGGA
TGTCCATCGAGTGGCCGTCTACGCGATCTTTGGGCCTTCAACATCCATTC
CCGGCAATGGCTAGAGCTGCCTCCGGCTCCCGGCCCTGAACGAGGCGGTG
CGTCAATCGCGTACGCTGATCAGCGGATCTACCGGATGAACGGATTTGAC
GGAACCAGAGAGCAAGGCGGAGCTGTGGATGTGTATGATGTGCGGACGAA
TGAGTGGACTAGTCTTACTTATGCAGCGGATGGCGTTTCCGGACCCAGTC
CTCGAAGTGTCGGCTGCTTGCTCGTCACAACCATCGCTGGAAGGCAGTCT
CTGGTAACAATGTTTGGCGAGCATGATCCAAGTAACCTGGGACACCAAGG
TGCCGGGAAGATGCTAGCGGATGTGTGGGCATTTGATCTCCAATCTCAGC
GGTGGGCACAGGTGGATGTTGCGGAGCCAAACAGACCTCCGGCGCGTGGC
TGGTTTGATGCGGACGTCATCGGCCCCGAAGCACATGCCAATCCTGGGAG
CATCATAGTCCACGGTGGACTTGCGGAGTCAAATGAGCGGTTGGATGATG
TGTGGCGACTGGATTTTGTCTAGATGCCGCGTGCTATCTGGACAAAAATT
CTCTCGGATGTCTCCATTAAGAGATCATCCCAGACTCTCGCAATTCTCGC
CAGCAACGCATACATCTATGGCGGGGAGCTGCGGCCAAGAGAACCAGTCG
ATTCTGCTGTATACCGTCTGTCTTTTGATGCTTCAACATCCAGCAACCGA
AGTCTCATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGG
ATCCGCCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGG
GCGGTATCGCTATGGCCCCGATCGAGGAATCTGGCTCCTTCTGGGTCTTT
GATCCGACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTC
GCAACATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAG
ACACTATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGAT
CTTTGGGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGC
TCCCGGCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGA
TCTACCGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTG
GATGTGTATGATGTGCGGACGAATGAGTGGACTAGTCTTACTTATGCAGC
GGATGGCGTTTCCGGACCCAGTCCTCGAAGTGTCGGCTGCTTGCTCGTCA
CAACCATCGCTGGAAGGCAGTCTCTGGTAACAATGTTTGGCGAGCATGAT
CCAAGTAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTG
GGCATTTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGC
CAAACAGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCC
GAAGCACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGA
GTCAAATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011222KJC3_011222Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011222-T1.exon1KJC3_011222-T1.exon1Aspergillus niger KJC3exon
KJC3_011222-T1.exon2KJC3_011222-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011222-T1.cdsKJC3_011222-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011222-T1KJC3_011222-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015915
DBxrefInterPro:IPR006652
DBxrefPFAM:PF13964
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
DBxrefPFAM:PF01344
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:77310..78400 +
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