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KJC3_011224-T1, KJC3_011224-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011224-T1
Unique NameKJC3_011224-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:81907..82946+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011224-T1 ID=KJC3_011224-T1|Name=KJC3_011224-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1040bp|location=Sequence derived from alignment at ch8:81907..82946+ (Aspergillus niger KJC3)
GCATGCGCTGGTCGGGATGATGTCAAGTGGCGCAGGCGCCTAAAATCTTT
GCCGGCCAACTCGGCCCGTCAGATCCGGTGCAATATATAAGAGACATATA
GATCCACTCGGCATATCTCGGATTTCATCTCACTCTCAGTCACCACATCG
GCTAGTAATCACTGCATTTGGTTACCATCTCTGAAATTATCTCAATTTAA
AACTGTGTCACCATGCCTCCTCCTGCCCCTCTTGTGCCCGAGCGCTGGAA
AGCCGAATTTGATGATCGCTATCAAGAATGGTAAGCAACCATAGTGAGGC
CTTGGGATTCCCTCTCGAGTCCGCTTGTACTGACGATTTTGTTACTGTTA
AGGTACTATGTCAACCTTCACACCGGGCGCTCACAATGGGAACGACCAGA
CCGACCAGCCCAGCCTGATGGTGCGGCTCCGCCTCCCCAGGGTCCCCCGC
CCAGTTACGAGGCCACCACGCGTAATCGACAAGATCCAGATCCACGAACT
CGGGATCGTCCGGATCCCTACTACTACTCCTCCCCACGGCCTGCGTCGCA
GTCCACATACACGCCGAATCGAGGGGAAATCCCCTACGGCTACCCGCAGC
CCCAGTACGGGTATAATGGCTATGGCTATAACCCTGTGTATCCCCCGCAA
CCCGCTTATCCCAATCAGTATCCCACTGCATACCAGAACGGCCCGGATCA
AGCCCAAGCTCCGCGCAACCAGAAGCAGAAGAAAGGCATGGGGAAGATGG
GGGCGGCTGCCCTGGGAGTGGGCGGAGGATTGCTGGGAGGATTCCTGCTC
GGAGAAGGCATCGAGGCGTTGGAGGATGATTTTGATCGTCCACCACCCCC
AGGCCCGGACTTTGACGACTTTGGGGGAGACTTTGGTCCATTCTAGTGCT
TGATCATGGTTATTTTTGCGATGATGACATGATACATTGTAGAAGAGATG
TTTCTGCCAACCTGATACCCAATAGACATCAATATACACTACTTCAGCTA
CTCTATGACTGGGCAAGCTCTTGATTGATTTAGACTGAGG
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Coding sequence (CDS) from alignment at ch8:81907..82946+

>KJC3_011224-T1 ID=KJC3_011224-T1|Name=KJC3_011224-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch8:81907..82946+ (Aspergillus niger KJC3)
ATGCCTCCTCCTGCCCCTCTTGTGCCCGAGCGCTGGAAAGCCGAATTTGA
TGATCGCTATCAAGAATGGTACTATGTCAACCTTCACACCGGGCGCTCAC
AATGGGAACGACCAGACCGACCAGCCCAGCCTGATGGTGCGGCTCCGCCT
CCCCAGGGTCCCCCGCCCAGTTACGAGGCCACCACGCGTAATCGACAAGA
TCCAGATCCACGAACTCGGGATCGTCCGGATCCCTACTACTACTCCTCCC
CACGGCCTGCGTCGCAGTCCACATACACGCCGAATCGAGGGGAAATCCCC
TACGGCTACCCGCAGCCCCAGTACGGGTATAATGGCTATGGCTATAACCC
TGTGTATCCCCCGCAACCCGCTTATCCCAATCAGTATCCCACTGCATACC
AGAACGGCCCGGATCAAGCCCAAGCTCCGCGCAACCAGAAGCAGAAGAAA
GGCATGGGGAAGATGGGGGCGGCTGCCCTGGGAGTGGGCGGAGGATTGCT
GGGAGGATTCCTGCTCGGAGAAGGCATCGAGGCGTTGGAGGATGATTTTG
ATCGTCCACCACCCCCAGGCCCGGACTTTGACGACTTTGGGGGAGACTTT
GGTCCATTCTAGATGCCTCCTCCTGCCCCTCTTGTGCCCGAGCGCTGGAA
AGCCGAATTTGATGATCGCTATCAAGAATGGTACTATGTCAACCTTCACA
CCGGGCGCTCACAATGGGAACGACCAGACCGACCAGCCCAGCCTGATGGT
GCGGCTCCGCCTCCCCAGGGTCCCCCGCCCAGTTACGAGGCCACCACGCG
TAATCGACAAGATCCAGATCCACGAACTCGGGATCGTCCGGATCCCTACT
ACTACTCCTCCCCACGGCCTGCGTCGCAGTCCACATACACGCCGAATCGA
GGGGAAATCCCCTACGGCTACCCGCAGCCCCAGTACGGGTATAATGGCTA
TGGCTATAACCCTGTGTATCCCCCGCAACCCGCTTATCCCAATCAGTATC
CCACTGCATACCAGAACGGCCCGGATCAAGCCCAAGCTCCGCGCAACCAG
AAGCAGAAGAAAGGCATGGGGAAGATGGGGGCGGCTGCCCTGGGAGTGGG
CGGAGGATTGCTGGGAGGATTCCTGCTCGGAGAAGGCATCGAGGCGTTGG
AGGATGATTTTGATCGTCCACCACCCCCAGGCCCGGACTTTGACGACTTT
GGGGGAGACTTTGGTCCATTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011224KJC3_011224Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011224-T1.utr5p1KJC3_011224-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011224-T1.exon1KJC3_011224-T1.exon1Aspergillus niger KJC3exon
KJC3_011224-T1.exon2KJC3_011224-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011224-T1.cdsKJC3_011224-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011224-T1.utr3p1KJC3_011224-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011224-T1KJC3_011224-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036020
DBxrefInterPro:IPR001202
DBxrefPFAM:PF00397
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:81907..82946 +
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