You are here

Home

KJC3_011244-T1, KJC3_011244-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011244-T1
Unique NameKJC3_011244-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:144260..144525-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011244-T1 ID=KJC3_011244-T1|Name=KJC3_011244-T1|organism=Aspergillus niger KJC3|type=mRNA|length=266bp|location=Sequence derived from alignment at ch8:144260..144525- (Aspergillus niger KJC3)
ATGCCTTCGAACCAGACGACCAAGTCGGATGCTTCCCGCATCCAGTCCTC
CCAAGTTAGCACTTGCTGTATGTTGGCATAGATTGCATGCTCACAAAGCT
ACAGGCACGAGGTGGAAAAGATATGAGCTCTGGTGGCGTTGCTGCTCGAG
CTCAAGCGGCTGCCGATCGGAATGCCAACGTTGCATCATCCAAAACCGGT
TCCTCTCATGGCCCGTCATCGGGCACTCAACAGAGTGGCCAGCAGTCCAC
GCCCGGAAAGAGATGA
back to top

Coding sequence (CDS) from alignment at ch8:144260..144525-

>KJC3_011244-T1 ID=KJC3_011244-T1|Name=KJC3_011244-T1|organism=Aspergillus niger KJC3|type=CDS|length=432bp|location=Sequence derived from alignment at ch8:144260..144525- (Aspergillus niger KJC3)
GCACGAGGTGGAAAAGATATGAGCTCTGGTGGCGTTGCTGCTCGAGCTCA
AGCGGCTGCCGATCGGAATGCCAACGTTGCATCATCCAAAACCGGTTCCT
CTCATGGCCCGTCATCGGGCACTCAACAGAGTGGCCAGCAGTCCACGCCC
GGAAAGAGATGAATGCCTTCGAACCAGACGACCAAGTCGGATGCTTCCCG
CATCCAGTCCTCCCAAGCACGAGGTGGAAAAGATATGAGCTCTGGTGGCG
TTGCTGCTCGAGCTCAAGCGGCTGCCGATCGGAATGCCAACGTTGCATCA
TCCAAAACCGGTTCCTCTCATGGCCCGTCATCGGGCACTCAACAGAGTGG
CCAGCAGTCCACGCCCGGAAAGAGATGAATGCCTTCGAACCAGACGACCA
AGTCGGATGCTTCCCGCATCCAGTCCTCCCAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011244KJC3_011244Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011244-T1KJC3_011244-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011244-T1.cdsKJC3_011244-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011244-T1.exon2KJC3_011244-T1.exon2Aspergillus niger KJC3exon
KJC3_011244-T1.exon1KJC3_011244-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.1
DBxrefInterPro:IPR007011
DBxrefPFAM:PF04927
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:144260..144525 -
Powered by Drupal