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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:147708..148333- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011247-T1 ID=KJC3_011247-T1|Name=KJC3_011247-T1|organism=Aspergillus niger KJC3|type=mRNA|length=626bp|location=Sequence derived from alignment at ch8:147708..148333- (Aspergillus niger KJC3)
ATGATGTACACGTTCATGTTGACATGGGTGACGATTGCACCCACCTCCAA
AGATCGAGACGACCCCGGTAACCTTTCCTACTACAGCTTGAACAATTACG
ACTGGGTCCGCTTCTTGCCCACGAGTATCGTCAATGTGTGCCTACTCCCT
TTGATCATCTTTACCTTTGCGCGCTCGACTGGCGGCTATGTCAATCCGAG
TATTACATTCGCTGCGTACTTTCTTCGCCGGATATCTTTATCGAGGGCTG
TTATGTATATTGGTGGACAGGTTATTGGAATTGTCCTGGCAGTGTGGGCT
GTGCAAGAAGCATACGGTAGCACAGGGTTTGATATAGGGTGTATCATCAG
TCGTGGAGGGGTTTCGATACGCAACGCATATATTGCTGAGGTTGTTAGCG
GCTTTGCTATGGTGGTGACTGTCATGTACATTGCTGCTGGTCGCAAATCC
GGAGTATTATTTGGAGATGCGATGTCGCCTTGGATGGTGGGCATTGCCAC
CGAGGCGGCGTTCTGGTTGTCGAGACTCATATGGCAGGGCCATCCCGGTG
CAAGTAGGCAATTGTAACATTCACTGTGGGGGAGACTATTTGGGGTTGCA
GCTGCTAACAGCCACATAGGATCTAA back to topCoding sequence (CDS) from alignment at ch8:147708..148333- >KJC3_011247-T1 ID=KJC3_011247-T1|Name=KJC3_011247-T1|organism=Aspergillus niger KJC3|type=CDS|length=1140bp|location=Sequence derived from alignment at ch8:147708..148333- (Aspergillus niger KJC3)
GATCTAAATGATGTACACGTTCATGTTGACATGGGTGACGATTGCACCCA
CCTCCAAAGATCGAGACGACCCCGGTAACCTTTCCTACTACAGCTTGAAC
AATTACGACTGGGTCCGCTTCTTGCCCACGAGTATCGTCAATGTGTGCCT
ACTCCCTTTGATCATCTTTACCTTTGCGCGCTCGACTGGCGGCTATGTCA
ATCCGAGTATTACATTCGCTGCGTACTTTCTTCGCCGGATATCTTTATCG
AGGGCTGTTATGTATATTGGTGGACAGGTTATTGGAATTGTCCTGGCAGT
GTGGGCTGTGCAAGAAGCATACGGTAGCACAGGGTTTGATATAGGGTGTA
TCATCAGTCGTGGAGGGGTTTCGATACGCAACGCATATATTGCTGAGGTT
GTTAGCGGCTTTGCTATGGTGGTGACTGTCATGTACATTGCTGCTGGTCG
CAAATCCGGAGTATTATTTGGAGATGCGATGTCGCCTTGGATGGTGGGCA
TTGCCACCGAGGCGGCGTTCTGGTTGTCGAGACTCATATGGCAGGGCCAT
CCCGGTGCAAGTAGGCAATTGATCTAAATGATGTACACGTTCATGTTGAC
ATGGGTGACGATTGCACCCACCTCCAAAGATCGAGACGACCCCGGTAACC
TTTCCTACTACAGCTTGAACAATTACGACTGGGTCCGCTTCTTGCCCACG
AGTATCGTCAATGTGTGCCTACTCCCTTTGATCATCTTTACCTTTGCGCG
CTCGACTGGCGGCTATGTCAATCCGAGTATTACATTCGCTGCGTACTTTC
TTCGCCGGATATCTTTATCGAGGGCTGTTATGTATATTGGTGGACAGGTT
ATTGGAATTGTCCTGGCAGTGTGGGCTGTGCAAGAAGCATACGGTAGCAC
AGGGTTTGATATAGGGTGTATCATCAGTCGTGGAGGGGTTTCGATACGCA
ACGCATATATTGCTGAGGTTGTTAGCGGCTTTGCTATGGTGGTGACTGTC
ATGTACATTGCTGCTGGTCGCAAATCCGGAGTATTATTTGGAGATGCGAT
GTCGCCTTGGATGGTGGGCATTGCCACCGAGGCGGCGTTCTGGTTGTCGA
GACTCATATGGCAGGGCCATCCCGGTGCAAGTAGGCAATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.1 |
| DBxref | InterPro:IPR023271 |
| DBxref | InterPro:IPR000425 |
| DBxref | PFAM:PF00230 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:147708..148333 - |
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