You are here

Home

KJC3_011259-T1, KJC3_011259-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011259-T1
Unique NameKJC3_011259-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:173332..174645+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011259-T1 ID=KJC3_011259-T1|Name=KJC3_011259-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1314bp|location=Sequence derived from alignment at ch8:173332..174645+ (Aspergillus niger KJC3)
TACCATTTGCTCCCCAGTAACCGACTGAGCGGCATTAGGAACTTACCCCA
CTAACCTCTGCACAAAGCAGACACCCATCATGACCATTTTTCGGAGTTCA
GCAAAGGCCAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGCTGTACGA
CTCCAACGAAGCGGAGGTTGAGTGAGTTTCCACAGACCTGATAAAGAATA
TCTTTCCCGAAGTTGACTTTCTTAGCATTGTCTTTGTCCATGGCCTCGGC
GGAAGTCGCGACGCAACCTGGACGATCGACGATGTGTGCTGGCCCCAAGC
CCTTCTTCCGCACGACTTGCCAAAAACCCGTATCATGACTTTTGGGTATG
ATTCACGGGTGGTCAGCTTCACGACAGCTCTGTCCCAGAACGGAATCGTG
GGCAATGCCGAGGACCTTTGTGCTCAGTTGGCACGGTTCAGAGCCTCTTC
GGTAAGAAGCTTTACGATTTAACCAGGATCTCGAGAAAGCTAAGGATGAA
ATATAGCCAGAGCGCCCGATCATCTTTGTAGCCCATAGCTTGGGCGGCTT
GGTCTGCGCGCAGGTAAGTTAACAACCCTTCTTTTCTCCTCAAGGTCGAA
GACTTAACGGAACATCGCAGGCTGTCGTGGCAGGCAATCGCAGTTCCCCG
TCCGACAACACGCAGATAATCAGCCAACACGTCCGCGGCATCGCCTTTCT
GGGAACTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCACGCTTAA
ACAAAGTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATATCTCGGAC
CTGAAAAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGTTTGCGAA
CGTATTGCGAAAGCGCGATAACTCTGATGACAGTATCCTAACCACTTTCT
TCTACGAGCAGTTGAAAACACAGGGCGTTATGGTAACTGGACTGCAGATC
CCTGAAATCTCTACTAGTTAAGCTAACATGAACAAAGGTGGTTGACCGCA
ATTCTGCCACTATCCCCGGTCGCGGAGACATGATATCCATCCAAGCCGAT
CACAAAAACATCTGCAAGTTCCGATCGAGGGAAGATGATGAAGGATATGG
GTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTGAGGTACCGGCGAAGC
AGAAGTCGAGTGTAAGGATCTATTGCTTGAGACGCTACTACAATTGCTAA
CTTTCATCCCAGAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCAT
CAACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGGA
CATTTGCGCGATAG
back to top

Coding sequence (CDS) from alignment at ch8:173332..174645+

>KJC3_011259-T1 ID=KJC3_011259-T1|Name=KJC3_011259-T1|organism=Aspergillus niger KJC3|type=CDS|length=5778bp|location=Sequence derived from alignment at ch8:173332..174645+ (Aspergillus niger KJC3)
ATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTA
TGGCATCAAAGTGCTGTACGACTCCAACGAAGCGGAGGTTGACATTGTCT
TTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCGACGAT
GTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCCGTAT
CATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGCTCTGT
CCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTTGGCA
CGGTTCAGAGCCTCTTCGCCAGAGCGCCCGATCATCTTTGTAGCCCATAG
CTTGGGCGGCTTGGTCTGCGCGCAGGCTGTCGTGGCAGGCAATCGCAGTT
CCCCGTCCGACAACACGCAGATAATCAGCCAACACGTCCGCGGCATCGCC
TTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCACG
CTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATATCT
CGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGTTT
GCGAACGTATTGCGAAAGCGCGATAACTCTGATGACAGTATCCTAACCAC
TTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTATGGTGGTTGACCGCA
ATTCTGCCACTATCCCCGGTCGCGGAGACATGATATCCATCCAAGCCGAT
CACAAAAACATCTGCAAGTTCCGATCGAGGGAAGATGATGAAGGATATGG
GTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTGAGGTACCGGCGAAGC
AGAAGTCGAGTAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCATC
AACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGGAC
ATTTGCGCGATAGATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGA
GCGAACCTCAGTATGGCATCAAAGTGCTGTACGACTCCAACGAAGCGGAG
GTTGACATTGTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTG
GACGATCGACGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGC
CAAAAACCCGTATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTC
ACGACAGCTCTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTG
TGCTCAGTTGGCACGGTTCAGAGCCTCTTCGCCAGAGCGCCCGATCATCT
TTGTAGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGGCTGTCGTGGCA
GGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAATCAGCCAACACGT
CCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCGA
ACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAAC
AAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCCT
GATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATGACA
GTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTATG
GTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCGGAGACATGATATC
CATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGATCGAGGGAAGATG
ATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTGAG
GTACCGGCGAAGCAGAAGTCGAGTAGCCCTGTCTTCAACTTCAACAATGC
TGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGA
TGAACTTTGGGACATTTGCGCGATAGATGACCATTTTTCGGAGTTCAGCA
AAGGCCAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGCTGTACGACTC
CAACGAAGCGGAGGTTGACATTGTCTTTGTCCATGGCCTCGGCGGAAGTC
GCGACGCAACCTGGACGATCGACGATGTGTGCTGGCCCCAAGCCCTTCTT
CCGCACGACTTGCCAAAAACCCGTATCATGACTTTTGGGTATGATTCACG
GGTGGTCAGCTTCACGACAGCTCTGTCCCAGAACGGAATCGTGGGCAATG
CCGAGGACCTTTGTGCTCAGTTGGCACGGTTCAGAGCCTCTTCGCCAGAG
CGCCCGATCATCTTTGTAGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCA
GGCTGTCGTGGCAGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAA
TCAGCCAACACGTCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGT
TCCGAAATCGCGAACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACAT
CTTTGAAAGCAACAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCA
CATTGCAGCTCCTGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGAT
AACTCTGATGACAGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAAC
ACAGGGCGTTATGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCG
GAGACATGATATCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGA
TCGAGGGAAGATGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAA
AATGATGGTTGAGGTACCGGCGAAGCAGAAGTCGAGTAGCCCTGTCTTCA
ACTTCAACAATGCTGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAACT
ATCAATGGGGGGATGAACTTTGGGACATTTGCGCGATAGATGACCATTTT
TCGGAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTATGGCATCAAAG
TGCTGTACGACTCCAACGAAGCGGAGGTTGACATTGTCTTTGTCCATGGC
CTCGGCGGAAGTCGCGACGCAACCTGGACGATCGACGATGTGTGCTGGCC
CCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCCGTATCATGACTTTTG
GGTATGATTCACGGGTGGTCAGCTTCACGACAGCTCTGTCCCAGAACGGA
ATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTTGGCACGGTTCAGAGC
CTCTTCGCCAGAGCGCCCGATCATCTTTGTAGCCCATAGCTTGGGCGGCT
TGGTCTGCGCGCAGGCTGTCGTGGCAGGCAATCGCAGTTCCCCGTCCGAC
AACACGCAGATAATCAGCCAACACGTCCGCGGCATCGCCTTTCTGGGAAC
TCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCACGCTTAAACAAAG
TGGCGGATTACATCTTTGAAAGCAACAAGGCCAATATCTCGGACCTGAAA
AGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGTTTGCGAACGTATT
GCGAAAGCGCGATAACTCTGATGACAGTATCCTAACCACTTTCTTCTACG
AGCAGTTGAAAACACAGGGCGTTATGGTGGTTGACCGCAATTCTGCCACT
ATCCCCGGTCGCGGAGACATGATATCCATCCAAGCCGATCACAAAAACAT
CTGCAAGTTCCGATCGAGGGAAGATGATGAAGGATATGGGTTGGTGCTTG
GTGCACTGAGGAAAATGATGGTTGAGGTACCGGCGAAGCAGAAGTCGAGT
AGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCATCAACAACCAGGC
AGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGGACATTTGCGCGAT
AGATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAG
TATGGCATCAAAGTGCTGTACGACTCCAACGAAGCGGAGGTTGACATTGT
CTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCGACG
ATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCCGT
ATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGCTCT
GTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTTGG
CACGGTTCAGAGCCTCTTCGCCAGAGCGCCCGATCATCTTTGTAGCCCAT
AGCTTGGGCGGCTTGGTCTGCGCGCAGGCTGTCGTGGCAGGCAATCGCAG
TTCCCCGTCCGACAACACGCAGATAATCAGCCAACACGTCCGCGGCATCG
CCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCA
CGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATAT
CTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGT
TTGCGAACGTATTGCGAAAGCGCGATAACTCTGATGACAGTATCCTAACC
ACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTATGGTGGTTGACCG
CAATTCTGCCACTATCCCCGGTCGCGGAGACATGATATCCATCCAAGCCG
ATCACAAAAACATCTGCAAGTTCCGATCGAGGGAAGATGATGAAGGATAT
GGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTGAGGTACCGGCGAA
GCAGAAGTCGAGTAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCA
TCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGG
ACATTTGCGCGATAGATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGA
GAGCGAACCTCAGTATGGCATCAAAGTGCTGTACGACTCCAACGAAGCGG
AGGTTGACATTGTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACC
TGGACGATCGACGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTT
GCCAAAAACCCGTATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCT
TCACGACAGCTCTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTT
TGTGCTCAGTTGGCACGGTTCAGAGCCTCTTCGCCAGAGCGCCCGATCAT
CTTTGTAGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGGCTGTCGTGG
CAGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAATCAGCCAACAC
GTCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGC
GAACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCA
ACAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTC
CTGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATGA
CAGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTA
TGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCGGAGACATGATA
TCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGATCGAGGGAAGA
TGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTG
AGGTACCGGCGAAGCAGAAGTCGAGTAGCCCTGTCTTCAACTTCAACAAT
GCTGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGG
GATGAACTTTGGGACATTTGCGCGATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011259KJC3_011259Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011259-T1KJC3_011259-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011259-T1.utr5p1KJC3_011259-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011259-T1.exon1KJC3_011259-T1.exon1Aspergillus niger KJC3exon
KJC3_011259-T1.exon2KJC3_011259-T1.exon2Aspergillus niger KJC3exon
KJC3_011259-T1.exon3KJC3_011259-T1.exon3Aspergillus niger KJC3exon
KJC3_011259-T1.exon4KJC3_011259-T1.exon4Aspergillus niger KJC3exon
KJC3_011259-T1.exon5KJC3_011259-T1.exon5Aspergillus niger KJC3exon
KJC3_011259-T1.exon6KJC3_011259-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011259-T1.cdsKJC3_011259-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF05057
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:173332..174645 +
Powered by Drupal