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KJC3_011260-T1, KJC3_011260-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011260-T1
Unique NameKJC3_011260-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:174914..175897-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011260-T1 ID=KJC3_011260-T1|Name=KJC3_011260-T1|organism=Aspergillus niger KJC3|type=mRNA|length=984bp|location=Sequence derived from alignment at ch8:174914..175897- (Aspergillus niger KJC3)
GAATACTAACACTGGATTATGAATCGCAGTACCAGACACAGCAAGAAGTT
CCTGCATAGACCAGGTTATACTCCAGCCGACCCACTCATGCTGCGTTCCC
CTCCTGCCCCTCCTCGGATTCGGTGAGAATAGCCTGCTCTGGAGGCCTTT
CCATGCAAGCCTGGCCAATATTATCCTGGCATGTAACTATTGCATATTGA
TACCTGCAGTCCCCACTGAGATTCAAGGCAAATGATTCCACAAAGTATAG
TGGAGCTAGTTGAGCTGGACAGCAAAGTGCTGTTGTAGGGCAGCAACTGT
CAGGCCAAACAGCATGACACATCTTAACTTCGAATTCTCTGTACCTCCTC
ACTCCATCCCACCTTCATCCTTGCCAGGAACAACTCCACATCAAATCATC
TTTTTCTCCGATTAATCATAGTTCCTGCTGAGACGAGATGGGTGACGGAA
ACACGTTTGACAACAGAGACAACACAGTTCACAACCAGGCTGGTAGTCAG
GTTGTTTATGGCAGTATTTATAATAATACTTTCTATGCCTATGAGCAAGG
TATATTATTCGATCAAGCTTCTAATTACTACACTAGTACTGACTTCCATG
GTCACAGATGGCGTGCAGCATATTGCTGAGGATAAGGTAGACAAATGAAT
CGTTCAACACCCATAAATATTACATAGACTAATATATCATCTCTTATCTC
AGTCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACT
GCGAAAGTGAAGCATCTACTAGACAACGGGGCAAACGCTTCGGCTGTGGA
TTCGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATG
ATATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAAC
CGCTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCC
CCTGGCGAACAAATTGGAGCTGAACTTGCTTTGA
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Coding sequence (CDS) from alignment at ch8:174914..175897-

>KJC3_011260-T1 ID=KJC3_011260-T1|Name=KJC3_011260-T1|organism=Aspergillus niger KJC3|type=CDS|length=1269bp|location=Sequence derived from alignment at ch8:174914..175897- (Aspergillus niger KJC3)
TCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGC
GAAAGTGAAGCATCTACTAGACAACGGGGCAAACGCTTCGGCTGTGGATT
CGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATGAT
ATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCG
CTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCC
TGGCGAACAAATTGGAGCTGAACTTGCTTTGAATGGCGTGCAGCATATTG
CTGAGGATAAGATGGGTGACGGAAACACGTTTGACAACAGAGACAACACA
GTTCACAACCAGGCTGGTAGTCAGGTTGTTTATGGCAGTATTTATAATAA
TACTTTCTATGCCTATGAGCAAGTCCCATCTCGATCAGAAGCTCCTAGAA
GCAGCCGGGAAAGGGGAAACTGCGAAAGTGAAGCATCTACTAGACAACGG
GGCAAACGCTTCGGCTGTGGATTCGCAAGGCCAGACAGTGCTTCACGTCG
CTGCATCCGGGGGACACGATGATATTATCAGCATTCTCTTGAGGCGAGGG
GCCGACAAGCATGCAAGAAACCGCTCTAATCACCGTCCCTCGGAGCTCGC
CAGGTTGCTTGGTCATATTCCCCTGGCGAACAAATTGGAGCTGAACTTGC
TTTGAATGGCGTGCAGCATATTGCTGAGGATAAGATGGGTGACGGAAACA
CGTTTGACAACAGAGACAACACAGTTCACAACCAGGCTGGTAGTCAGGTT
GTTTATGGCAGTATTTATAATAATACTTTCTATGCCTATGAGCAAGTCCC
ATCTCGATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGCGAAA
GTGAAGCATCTACTAGACAACGGGGCAAACGCTTCGGCTGTGGATTCGCA
AGGCCAGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATGATATTA
TCAGCATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCGCTCT
AATCACCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCCTGGC
GAACAAATTGGAGCTGAACTTGCTTTGAATGGCGTGCAGCATATTGCTGA
GGATAAGATGGGTGACGGAAACACGTTTGACAACAGAGACAACACAGTTC
ACAACCAGGCTGGTAGTCAGGTTGTTTATGGCAGTATTTATAATAATACT
TTCTATGCCTATGAGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011260KJC3_011260Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011260-T1KJC3_011260-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011260-T1.cdsKJC3_011260-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011260-T1.exon3KJC3_011260-T1.exon3Aspergillus niger KJC3exon
KJC3_011260-T1.exon2KJC3_011260-T1.exon2Aspergillus niger KJC3exon
KJC3_011260-T1.exon1KJC3_011260-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011260-T1.utr5p1KJC3_011260-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:174914..175897 -
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