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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:177213..178195- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011262-T1 ID=KJC3_011262-T1|Name=KJC3_011262-T1|organism=Aspergillus niger KJC3|type=mRNA|length=983bp|location=Sequence derived from alignment at ch8:177213..178195- (Aspergillus niger KJC3)
CCCGAATGCCAAGAACCCACTTCCCCCACATCCTTCACTCTTCCTCTTCT
TCCGGCGTGAGCAAAGTAGCATATTTCATCAACCATTATCCCAAGTTGAA
GTGATTTGTACCGCACTTTCAGGTTTCTTGTCATTGACTCTCAAAAATCG
ATACTTCCACAAAGTAGCAGTCCTCTTAACACCATATAAAAGCACACCAT
GTCATCCCCGAATCCCGTCGATGCCCCGCAGCATGTCCTACAGCTCCTTT
CCGAACTTCACAAAAAGTCCTTGAAACAGGAAGCTCTGATTTCCAAGAAC
GGCAAGTTTATTTCCACGACTCTTCTCGGCAAGCTAGAAGACAAAGACGC
TGCCGCCAAGCAAGCCGAATTCGACCAAGTCATGCTCGACAAATTCATCG
CGCTGGACGAAGACAAATGCCAATTCACCTATCAGCTGATCAACGCCATG
GGTGCTACTAATGTCATCGAGGCAGGCACCAGCTTTGGGGTCAGCACCAT
CTACCTTGCTCTGGCTGTCGCGAAGACCACCGCCGCAACCGGCAAGTCTG
GCACTGTCATCGCAACGGAGAAGGAGAAATCGAAGGCGGATATTGCCCGT
GGTTACTGGCGTCAGTGTGGTGATCTTGTGGAGAAACAGATCGATCTGAG
AGAGGGTGATCTGCTTGAAACTTTGAAGGAAGGGCTGCCGGAAATTGATC
TTCTCCTTCTTGACAGTAAGTTTGTTGCCTTGTTGGCCGAGGACACCTAT
GTGGCTAACTGAGATCCATAGTCTGGACTCCTCTAGCACTTCCTACCCTT
AAAATCGTTCTCCCTCGGCTCCGACACGGTGCAGTGGTGCTTGCAGATAA
CACGATCTCCGGAGCTCAGGGCTACGCGGATCTGTTGTCTTTCTTGAGAT
CGCCTGAGAATGGCTTCCGCAATATGACGTTGCCTTTCACGAATGGATTT
GAGATGAGCGTTTACCTGCCGCAGGGGAAGTGA back to topCoding sequence (CDS) from alignment at ch8:177213..178195- >KJC3_011262-T1 ID=KJC3_011262-T1|Name=KJC3_011262-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch8:177213..178195- (Aspergillus niger KJC3)
TCTGGACTCCTCTAGCACTTCCTACCCTTAAAATCGTTCTCCCTCGGCTC
CGACACGGTGCAGTGGTGCTTGCAGATAACACGATCTCCGGAGCTCAGGG
CTACGCGGATCTGTTGTCTTTCTTGAGATCGCCTGAGAATGGCTTCCGCA
ATATGACGTTGCCTTTCACGAATGGATTTGAGATGAGCGTTTACCTGCCG
CAGGGGAAGTGAATGTCATCCCCGAATCCCGTCGATGCCCCGCAGCATGT
CCTACAGCTCCTTTCCGAACTTCACAAAAAGTCCTTGAAACAGGAAGCTC
TGATTTCCAAGAACGGCAAGTTTATTTCCACGACTCTTCTCGGCAAGCTA
GAAGACAAAGACGCTGCCGCCAAGCAAGCCGAATTCGACCAAGTCATGCT
CGACAAATTCATCGCGCTGGACGAAGACAAATGCCAATTCACCTATCAGC
TGATCAACGCCATGGGTGCTACTAATGTCATCGAGGCAGGCACCAGCTTT
GGGGTCAGCACCATCTACCTTGCTCTGGCTGTCGCGAAGACCACCGCCGC
AACCGGCAAGTCTGGCACTGTCATCGCAACGGAGAAGGAGAAATCGAAGG
CGGATATTGCCCGTGGTTACTGGCGTCAGTGTGGTGATCTTGTGGAGAAA
CAGATCGATCTGAGAGAGGGTGATCTGCTTGAAACTTTGAAGGAAGGGCT
GCCGGAAATTGATCTTCTCCTTCTTGACATCTGGACTCCTCTAGCACTTC
CTACCCTTAAAATCGTTCTCCCTCGGCTCCGACACGGTGCAGTGGTGCTT
GCAGATAACACGATCTCCGGAGCTCAGGGCTACGCGGATCTGTTGTCTTT
CTTGAGATCGCCTGAGAATGGCTTCCGCAATATGACGTTGCCTTTCACGA
ATGGATTTGAGATGAGCGTTTACCTGCCGCAGGGGAAGTGAATGTCATCC
CCGAATCCCGTCGATGCCCCGCAGCATGTCCTACAGCTCCTTTCCGAACT
TCACAAAAAGTCCTTGAAACAGGAAGCTCTGATTTCCAAGAACGGCAAGT
TTATTTCCACGACTCTTCTCGGCAAGCTAGAAGACAAAGACGCTGCCGCC
AAGCAAGCCGAATTCGACCAAGTCATGCTCGACAAATTCATCGCGCTGGA
CGAAGACAAATGCCAATTCACCTATCAGCTGATCAACGCCATGGGTGCTA
CTAATGTCATCGAGGCAGGCACCAGCTTTGGGGTCAGCACCATCTACCTT
GCTCTGGCTGTCGCGAAGACCACCGCCGCAACCGGCAAGTCTGGCACTGT
CATCGCAACGGAGAAGGAGAAATCGAAGGCGGATATTGCCCGTGGTTACT
GGCGTCAGTGTGGTGATCTTGTGGAGAAACAGATCGATCTGAGAGAGGGT
GATCTGCTTGAAACTTTGAAGGAAGGGCTGCCGGAAATTGATCTTCTCCT
TCTTGACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008171 | O-methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011262-T1.utr5p1 | KJC3_011262-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR002935 |
| DBxref | PFAM:PF01596 |
| DBxref | PFAM:PF13578 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:177213..178195 - |
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