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KJC3_011279-T1, KJC3_011279-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011279-T1
Unique NameKJC3_011279-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:203591..205476+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011279-T1 ID=KJC3_011279-T1|Name=KJC3_011279-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1886bp|location=Sequence derived from alignment at ch8:203591..205476+ (Aspergillus niger KJC3)
TTTTTTTTAATCACACATCGGCTCCCTTTCATCGCCTGTCTTCCTTTCCT
TTCCATTAACTTTTCACCAATCCTTCCACCTTCTTATTGGTGGTTATTTA
ACCCGTCCATAAGCATGGATGAGGAAGATGGCCATTGCAAAGAGACCGAG
GTCACCGTCCAGTCGACGAGCCCCGTGGACTCGGCCGATTATGATCCTTT
CGACCCCCAAACCCGCTCCACCACGTATAAGTGGATCACCGTCGTCCTTG
TCGCGGGATTATCAACCATGGTGTAAGATTGATCTCCCATAATTCTCAAG
GTCAAGGCTTCTGACTGTTGCGCCCGGGAAAGTCAGCTGTCCACCATCAT
AGCTGCCCCTGTCTCCCCGTCCATCTTGGCTCATTTTCATTCCGACAATG
CCCTCTACCGCACCCTCATTGTTTCCATCTGGGAACTCGGTGAAATCGTA
GCACCGTTACTATGGGGCCCGCTTTCTGAGTTGTATGGCCGACAATGGCC
TCTGAATATTGCCAACCTCTTCTTCGTGGCCTTCTTGGCTGGCACTGCCG
CCAGCACCAGTATCCAGATGCTGATTGCATTCCGGTTCCTGAGTGGTGCG
GCGACTGCAGCATCAGCCATCGGTCCTGGCATTGTCAGCGATCTCTTTCC
AGAGGAAAGTCGCGGACGTGCCATGTCTATTATGTCCTTGACCGGTGCAT
TGGGACCAGTAGTAGGCCCCATCATCGGCTCCTATCTGGGTGAAAAGGCC
GGATGGCGATGGGCATTCTGGTTACCGACCATTGCTACGGGTACTCTGTC
CCTGCTCATTCTTGTTGTGTACCGTGAAACGTACAGCGTCACTCTACAGA
AACGCAAAGCTAGACAGCAGAACCCCGAGAGTGGTTCCAAGAGTCCCGAG
GATACAGACAAGACGGCCAGTCAAGTATTTTTCAAAGCTATCCTCCGGCC
ACTTCGTCTGCTCATCCGGTCCCCCATGCTTATACTAGTTACCTTCTACC
TCAGCGTGGTCTACGGGTACACCTACCTGGTGATGACAACCATCGCACCA
CTGTTCCAGGATGTCTACGGCTTCTCCGAAGGAGCTTCCGGCCTAGCCTT
CCTAGGACTGTGCCTTGGGCTTATTCTGGGGGCTTTCCTTTGCAGCTTTC
TGCTAGATCGCTATGTACGCACAGCCAGGGCACGGTCCGGCACCTCTAAA
CCAGAGCAGCGCCTTCCTCCCGTCCTGATTGCATGCTTCGTCATGTCAGG
CGGCCTTTTTCTCTTTGGCTGGACCGCACAGTATCATGTCCAATGGATTG
CACCAATTATTGGTACGGGCATTATTGGGTTTGGACTAGTGTCTACCACC
ATCACCTTGCAGACTTACGTCGTGGACCTCTTTGGCATCTACGCCGCGAG
TGCTACCAGCGCAATGCTGGTGCCCAGAAATGCCTGCGCCGCATTCTTGC
CCCTTGCAGGGCCACCACTGTTTGACCGCCTTGGATACAACTGGGGCGGG
ACTCTACTGGCGCTGATTGTATTGGTGTTCTCGCTCATGCCCCTAATCTT
TATCAAGTATGGCGAGAGATTGCGGGGAAAGAATCTACTTGATGATTGAG
ATGTCGATGGAATTTGTATAGTACGTCTAGTATGACAAAAGTTTTAACAT
GATGGTAATGAAACTGCTTGGGAATGTTCTTATTGGGAAGAGGTATCTGC
TGCGCATACACTACTCTCCAGGGCTGGATCCGACTCACGACTAGTATATA
CCCGTCTAGGAAGGCCTTGCGGGGACCGATTTCAGATGGACAGAATGACT
GGCCCTGAATGCTAAATGCTATACAGGCAACAACACCTCGATCTGAATAT
ACTAGTATCCAGCTTGTTTAACGCATGATATCATAC
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Coding sequence (CDS) from alignment at ch8:203591..205476+

>KJC3_011279-T1 ID=KJC3_011279-T1|Name=KJC3_011279-T1|organism=Aspergillus niger KJC3|type=CDS|length=1032bp|location=Sequence derived from alignment at ch8:203591..205476+ (Aspergillus niger KJC3)
ATGCTGATTGCATTCCGGTTCCTGAGTGGTGCGGCGACTGCAGCATCAGC
CATCGGTCCTGGCATTGTCAGCGATCTCTTTCCAGAGGAAAGTCGCGGAC
GTGCCATGTCTATTATGTCCTTGACCGGTGCATTGGGACCAGTAGTAGGC
CCCATCATCGGCTCCTATCTGGGTGAAAAGGCCGGATGGCGATGGGCATT
CTGGTTACCGACCATTGCTACGGGTACTCTGTCCCTGCTCATTCTTGTTG
TGTACCGTGAAACGTACAGCGTCACTCTACAGAAACGCAAAGCTAGACAG
CAGAACCCCGAGAGTGGTTCCAAGAGTCCCGAGGATACAGACAAGACGGC
CAGTCAAGTATTTTTCAAAGCTATCCTCCGGCCACTTCGTCTGCTCATCC
GGTCCCCCATGCTTATACTAGTTACCTTCTACCTCAGCGTGGTCTACGGG
TACACCTACCTGGTGATGACAACCATCGCACCACTGTTCCAGGATGTCTA
CGGCTTCTCCGAAGGAGCTTCCGGCCTAGCCTTCCTAGGACTGTGCCTTG
GGCTTATTCTGGGGGCTTTCCTTTGCAGCTTTCTGCTAGATCGCTATGTA
CGCACAGCCAGGGCACGGTCCGGCACCTCTAAACCAGAGCAGCGCCTTCC
TCCCGTCCTGATTGCATGCTTCGTCATGTCAGGCGGCCTTTTTCTCTTTG
GCTGGACCGCACAGTATCATGTCCAATGGATTGCACCAATTATTGGTACG
GGCATTATTGGGTTTGGACTAGTGTCTACCACCATCACCTTGCAGACTTA
CGTCGTGGACCTCTTTGGCATCTACGCCGCGAGTGCTACCAGCGCAATGC
TGGTGCCCAGAAATGCCTGCGCCGCATTCTTGCCCCTTGCAGGGCCACCA
CTGTTTGACCGCCTTGGATACAACTGGGGCGGGACTCTACTGGCGCTGAT
TGTATTGGTGTTCTCGCTCATGCCCCTAATCTTTATCAAGTATGGCGAGA
GATTGCGGGGAAAGAATCTACTTGATGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011279KJC3_011279Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011279-T1.utr5p1KJC3_011279-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011279-T1.exon1KJC3_011279-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011279-T1.cdsKJC3_011279-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011279-T1.utr3p1KJC3_011279-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011279-T1KJC3_011279-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:203591..205476 +
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