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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:205677..206913- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011280-T1 ID=KJC3_011280-T1|Name=KJC3_011280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1237bp|location=Sequence derived from alignment at ch8:205677..206913- (Aspergillus niger KJC3)
ATGTCTCCATCAGCTTGCAATACCGGGTCGAACGGCGCAGACAGCGCAGA
GCAGCTTCTACAAGACTTGAAGAAGAGCAATACTCTGCCACTATGGACGC
AGATGACCAGACTCAACCCGCCAGAGCCTAATCCAACAGCTGTACCCTTC
ATTTGGAGATATGATAGCATCCGTCCAAACTTGCTTCGCGCCGGCGAACT
CGTCACCGAGAAACAGGCTGAGAGAAGAGTGCTCATGCTCATCAACCCCG
CTAGAGGTATATAGTATTCCTTCCCAATGCACGGTTTGACAATGACGCTG
AATTTCACCTTATTCTCTTACGACCAGATGCGCCATACACAACCGATACG
CTCTACGCAGGTCTCCAACTCGTAATGCCCAATGAGACAGCCCCCGCCCA
CCGTCATACCGCGTTCGCAATGCGGTATATTATCGAAGGCAATGGGGGGT
TTACTGCTGTGCATGGCAAGAGGATCAAGATGCAGAAAGGCGACGTGATT
CTCACCCCGACGTGGAACTACCACGACCACGGGAAGGACGGAACCGGGCC
TATGATCTGGCTGGACGGTCTGGATCTACCTAATTTCCGCCACTTCCCTG
TGCATTTTGTCGATCACTATGATCAACCGCGATACCCGGCGGAGGATGTT
GATAGCGCGACCTCACCCATTGTATTCCCGTGGGACAAGATGAAGGCGGA
GCTGGATATGGCCCCGGGTACCTGGGCTGTGAGACGATATCTTAGGGCTG
ATGGTAGCGAAGGTATGATTAGCCCGTCTGTTGGTTCTGCTTTGCAATAC
AACATAGGTACGCCTTTGGCTGACAGGCTTAATGTGTAGTGAGTCGTGTT
CTAGGCGGTAGTGCCGAACGGGTCGACGCTGGTGCATCTTCCCTACCCCG
GCAAGAGACAACCTCCGCGGTCTACCATGTTATCGCGGGAAGCGGATGCT
CGGAAATTGGGGACAAGACTCTTGTATGGGAGACAGGGGACACGTTCTGC
GTGCCGTCCTGGTACAAGTATCGGCATATTGCGGCTGAGGGGGAGACCGT
GTACCTTTACCGTTTCGACGATAAGCCTATGATCTCGGCCTTGGGGTTCT
ACCGCTCCATCGATACGGATCTGGCGACGCTGGTGTCCCAGTAGAACCTT
GAACTGCCGATGATGTCTGAAGGAAGCGAATTTTGCGAGCGTTCAATTAT
TTTAGGGGGTGATGAATACGGGCAAGGCAATGATTAC back to topCoding sequence (CDS) from alignment at ch8:205677..206913- >KJC3_011280-T1 ID=KJC3_011280-T1|Name=KJC3_011280-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch8:205677..206913- (Aspergillus niger KJC3)
TGAGTCGTGTTCTAGGCGGTAGTGCCGAACGGGTCGACGCTGGTGCATCT
TCCCTACCCCGGCAAGAGACAACCTCCGCGGTCTACCATGTTATCGCGGG
AAGCGGATGCTCGGAAATTGGGGACAAGACTCTTGTATGGGAGACAGGGG
ACACGTTCTGCGTGCCGTCCTGGTACAAGTATCGGCATATTGCGGCTGAG
GGGGAGACCGTGTACCTTTACCGTTTCGACGATAAGCCTATGATCTCGGC
CTTGGGGTTCTACCGCTCCATCGATACGGATCTGGCGACGCTGGTGTCCC
AGTAGATGCGCCATACACAACCGATACGCTCTACGCAGGTCTCCAACTCG
TAATGCCCAATGAGACAGCCCCCGCCCACCGTCATACCGCGTTCGCAATG
CGGTATATTATCGAAGGCAATGGGGGGTTTACTGCTGTGCATGGCAAGAG
GATCAAGATGCAGAAAGGCGACGTGATTCTCACCCCGACGTGGAACTACC
ACGACCACGGGAAGGACGGAACCGGGCCTATGATCTGGCTGGACGGTCTG
GATCTACCTAATTTCCGCCACTTCCCTGTGCATTTTGTCGATCACTATGA
TCAACCGCGATACCCGGCGGAGGATGTTGATAGCGCGACCTCACCCATTG
TATTCCCGTGGGACAAGATGAAGGCGGAGCTGGATATGGCCCCGGGTACC
TGGGCTGTGAGACGATATCTTAGGGCTGATGGTAGCGAAGATGTCTCCAT
CAGCTTGCAATACCGGGTCGAACGGCGCAGACAGCGCAGAGCAGCTTCTA
CAAGACTTGAAGAAGAGCAATACTCTGCCACTATGGACGCAGATGACCAG
ACTCAACCCGCCAGAGCCTAATCCAACAGCTGTACCCTTCATTTGGAGAT
ATGATAGCATCCGTCCAAACTTGCTTCGCGCCGGCGAACTCGTCACCGAG
AAACAGGCTGAGAGAAGAGTGCTCATGCTCATCAACCCCGCTAGAGTGAG
TCGTGTTCTAGGCGGTAGTGCCGAACGGGTCGACGCTGGTGCATCTTCCC
TACCCCGGCAAGAGACAACCTCCGCGGTCTACCATGTTATCGCGGGAAGC
GGATGCTCGGAAATTGGGGACAAGACTCTTGTATGGGAGACAGGGGACAC
GTTCTGCGTGCCGTCCTGGTACAAGTATCGGCATATTGCGGCTGAGGGGG
AGACCGTGTACCTTTACCGTTTCGACGATAAGCCTATGATCTCGGCCTTG
GGGTTCTACCGCTCCATCGATACGGATCTGGCGACGCTGGTGTCCCAGTA
GATGCGCCATACACAACCGATACGCTCTACGCAGGTCTCCAACTCGTAAT
GCCCAATGAGACAGCCCCCGCCCACCGTCATACCGCGTTCGCAATGCGGT
ATATTATCGAAGGCAATGGGGGGTTTACTGCTGTGCATGGCAAGAGGATC
AAGATGCAGAAAGGCGACGTGATTCTCACCCCGACGTGGAACTACCACGA
CCACGGGAAGGACGGAACCGGGCCTATGATCTGGCTGGACGGTCTGGATC
TACCTAATTTCCGCCACTTCCCTGTGCATTTTGTCGATCACTATGATCAA
CCGCGATACCCGGCGGAGGATGTTGATAGCGCGACCTCACCCATTGTATT
CCCGTGGGACAAGATGAAGGCGGAGCTGGATATGGCCCCGGGTACCTGGG
CTGTGAGACGATATCTTAGGGCTGATGGTAGCGAAGATGTCTCCATCAGC
TTGCAATACCGGGTCGAACGGCGCAGACAGCGCAGAGCAGCTTCTACAAG
ACTTGAAGAAGAGCAATACTCTGCCACTATGGACGCAGATGACCAGACTC
AACCCGCCAGAGCCTAATCCAACAGCTGTACCCTTCATTTGGAGATATGA
TAGCATCCGTCCAAACTTGCTTCGCGCCGGCGAACTCGTCACCGAGAAAC
AGGCTGAGAGAAGAGTGCTCATGCTCATCAACCCCGCTAGAGTGAGTCGT
GTTCTAGGCGGTAGTGCCGAACGGGTCGACGCTGGTGCATCTTCCCTACC
CCGGCAAGAGACAACCTCCGCGGTCTACCATGTTATCGCGGGAAGCGGAT
GCTCGGAAATTGGGGACAAGACTCTTGTATGGGAGACAGGGGACACGTTC
TGCGTGCCGTCCTGGTACAAGTATCGGCATATTGCGGCTGAGGGGGAGAC
CGTGTACCTTTACCGTTTCGACGATAAGCCTATGATCTCGGCCTTGGGGT
TCTACCGCTCCATCGATACGGATCTGGCGACGCTGGTGTCCCAGTAGATG
CGCCATACACAACCGATACGCTCTACGCAGGTCTCCAACTCGTAATGCCC
AATGAGACAGCCCCCGCCCACCGTCATACCGCGTTCGCAATGCGGTATAT
TATCGAAGGCAATGGGGGGTTTACTGCTGTGCATGGCAAGAGGATCAAGA
TGCAGAAAGGCGACGTGATTCTCACCCCGACGTGGAACTACCACGACCAC
GGGAAGGACGGAACCGGGCCTATGATCTGGCTGGACGGTCTGGATCTACC
TAATTTCCGCCACTTCCCTGTGCATTTTGTCGATCACTATGATCAACCGC
GATACCCGGCGGAGGATGTTGATAGCGCGACCTCACCCATTGTATTCCCG
TGGGACAAGATGAAGGCGGAGCTGGATATGGCCCCGGGTACCTGGGCTGT
GAGACGATATCTTAGGGCTGATGGTAGCGAAGATGTCTCCATCAGCTTGC
AATACCGGGTCGAACGGCGCAGACAGCGCAGAGCAGCTTCTACAAGACTT
GAAGAAGAGCAATACTCTGCCACTATGGACGCAGATGACCAGACTCAACC
CGCCAGAGCCTAATCCAACAGCTGTACCCTTCATTTGGAGATATGATAGC
ATCCGTCCAAACTTGCTTCGCGCCGGCGAACTCGTCACCGAGAAACAGGC
TGAGAGAAGAGTGCTCATGCTCATCAACCCCGCTAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011280-T1.utr3p1 | KJC3_011280-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR013096 |
| DBxref | InterPro:IPR014710 |
| DBxref | PFAM:PF07883 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:205677..206913 - |
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